| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3221823 = | 116 (0.840) | 6 (0.050) | 6/210 | NT | 5.1% | coding (358/984 nt) | ebgR | transcriptional repressor |
| ? | NC_000913 | 3221880 = | 116 (0.910) | coding (415/984 nt) | ebgR | transcriptional repressor | |||||
GTTGATATAGAAGTCGATGATTTCTTTACTGATGCGTGCCAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3221978‑3221823‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacaatATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCTGGC > NC_000913/3221880‑3222026 GTTGATATAGAAGTCGATGATTTCTTTACTGATGCGTGCCAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGC > 4:648469/1‑149GTTGATATAGAAGTCGATGATTTCTTTACTGATGCGTGCCAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGC > 4:360337/1‑149GTTGATATAGAAGTCGATGATTTCTTTACTGATGCGTGCCAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGC < 2:649301/149‑1GTTGATATAGAAGTCGATGATTTCTTTACTGATGCGTGCCAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGC < 4:107536/149‑1 TTGATATAGAAGTCGATGATTTCTTTACTGATGCGTGCCAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCC > 3:1465607/1‑149 CAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAAT < 4:146632/117‑1 CAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAAT > 3:146632/1‑117 GATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAA < 1:1091203/68‑1 GATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAA > 2:1091203/1‑68 GTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT > 3:1120283/1‑149 TCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTA < 1:1310557/145‑1 TCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTA > 2:1310557/1‑145 CGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 2:1157216/1‑149 CAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATC < 1:1157216/149‑1 GGGCGTGGGTTTGCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGG < 4:1120283/149‑1 CCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAG < 1:649301/149‑1 CGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGC > 2:539568/1‑149 GACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCAT > 3:390346/1‑89 GACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCAT < 4:390346/89‑1 ACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCT > 3:668240/1‑149 ACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCT > 3:92921/1‑149 CAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCTG < 3:15759/149‑1 ATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCTGGC < 4:668240/149‑1 TATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGTGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCT < 4:1299813/145‑1 TATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCT > 3:1299813/1‑145 GTTGATATAGAAGTCGATGATTTCTTTACTGATGCGTGCCAGATCGATATCCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGCGCGCAGGGCGGGCGTGGGTTTGCCGACAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3221978‑3221823‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgacaatATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCTGGC > NC_000913/3221880‑3222026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |