New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3241202	54 (0.390)	28 (0.220)	15/210	NT	32.3%	coding (543/552 nt)	ygjV	Imp‑YgjV family inner membrane protein
	?	NC_000913	= 3241215	67 (0.520)					coding (530/552 nt)	ygjV	Imp‑YgjV family inner membrane protein

GTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3241048‑3241202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccccttCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCAGCGCGGTTTCGCAAGAGTCCTGCAATACGCCGAT  <  NC_000913/3241215‑3241069                                                                                                                                                                                                                                                                                                                GTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAA                                                                                                                                                           >  3:55372/1‑149         CGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCC                                                                                                                                                   >  4:678759/1‑149           TCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGC                                                                                                                                                 >  3:1157566/1‑149                      ATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAA                                                                                                                                      >  4:631102/1‑149                      ATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAA                                                                                                                                      >  1:928636/1‑149                       TCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAG                                                                                                                                     >  4:989506/1‑149                       TCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAG                                                                                                                                     <  4:1157566/149‑1                         GGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGG                                                                                                                                   <  3:989506/149‑1                         GGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGG                                                                                                                                   <  2:928636/149‑1                          GCGTATTGCAGGACTCTTGTGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  1:256251/149‑1                          GCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  3:631102/149‑1                          GCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  1:1166365/149‑1                          GCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  2:838841/149‑1                          GCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  4:974925/149‑1                          GCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  3:678759/149‑1                             TATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGG                                                                                                                                   >  1:1319862/1‑145                             TATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGG                                                                                                                                   <  2:1319862/145‑1                                   AGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGCCGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTT                                                                                                                                >  4:1461137/1‑142                                   AGGACTCTGGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAAGTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTT                                                                                                                                <  3:1461137/142‑1                                      ACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGG                                                                                                                                    <  2:796776/135‑1                                      ACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGG                                                                                                                                    >  1:796776/1‑135                                          TTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  2:1033153/133‑1                                          TTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  >  1:1033153/1‑133                                          TTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  >  2:208669/1‑133                                          TTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  1:208669/133‑1                                          TTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTT                                                                                                                                                     >  4:1166787/1‑114                                          TTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTT                                                                                                                                                     <  3:1166787/114‑1                                                AACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAAC                                                                                                                                                          >  2:1185849/1‑103                                                AACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAAC                                                                                                                                                          <  1:1185849/103‑1                                                                                                        AAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  <  1:1015383/71‑1                                                                                                        AAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                                                                                  >  2:1015383/1‑71                                                                                                                    TGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGG                                                                                                                                    <  1:1035823/57‑1                                                                                                                    TGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGG                                                                                                                                    >  2:1035823/1‑57                                                                                                                                              TTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCA                                                                <  2:33071/99‑1                                                                                                                                              TTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCA                                                                >  1:33071/1‑99                                                                                                                                                       CCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCAGCGCGGTTTCGCAAGAGTCCT               <  2:735622/139‑1                                                                                                                                                       CCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCAGCGCGGTTTCGCAAGAGTCCT               >  1:735622/1‑139                                                                                                                                                       CCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCA                                    <  2:1032303/118‑1                                                                                                                                                       CCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCA                                    >  1:1032303/1‑118                                                                                                                                                        CCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCAGCGCGGTTTCGC                        <  3:647708/129‑1                                                                                                                                                        CCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCAGCGCGGTTTCGC                        >  4:647708/1‑129                                                                                                                                                          TTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCAGCGCGGTTTCGCAAGAGTCCTGCAATACGCCGAT  <  2:1170189/149‑1                                                                                                                                                                                                                                                                                                                GTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3241048‑3241202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccccttCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCACGTCAGTTGAAGAGTTCAGCGCGGTTTCGCAAGAGTCCTGCAATACGCCGAT  <  NC_000913/3241215‑3241069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.