| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3892902 = | 188 (1.360) | 9 (0.070) | 6/212 | NT | 5.4% | coding (138/960 nt) | yidZ | putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | 3892929 = | 139 (1.070) | coding (165/960 nt) | yidZ | putative DNA‑binding transcriptional regulator | |||||
GCCGCGCGGTGTCTGGTGGTGCGGTTTATCCAGCAGCAGGTTGCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3893052‑3892902‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctcttTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGCGGCCTGAAGTTTGAGCTGGCGGC > NC_000913/3892929‑3893072 GCCGCGCGGTGTCTGGTGGTGCGGTTTATCCAGCAGCAGGTTGCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTC > 3:1295306/1‑149GCCGCGCGGTGTCTGGTGGTGCGGTTTATCCAGCAGCAGGTTGCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTC > 3:509993/1‑149GCCGCGCGGTGTCTGGTGGTGCGGTTTATCCAGCAGCAGGTTGCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGATCGTCAAACCACGCTC < 3:503245/149‑1 CCGCGCGGTGTCTGGTGGTGCGGTTTATCCAGCAGCAGGTTGCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTCT < 3:348977/149‑1 TGGTGCGGTTTATCCAGCAGCAGGTTGCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTC < 1:952120/133‑1 TGGTGCGGTTTATCCAGCAGCAGGTTGCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTC > 2:952120/1‑133 GCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTCT > 3:1070464/1‑108 GCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTCT < 4:1070464/108‑1 TGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTCTT > 3:608019/1‑74 TGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTCTT < 4:608019/74‑1 GCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCAC > 4:688513/1‑56 GCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCAC < 3:688513/56‑1 ACAAAGAGCGGGTCGTCAAACCACGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCA < 3:323170/141‑1 ACAAAGAGCGGGTCGTCAAACCACGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCA > 4:323170/1‑141 ACAAAGAGCGGGTCGTCAAACCACGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAA < 3:359198/106‑1 ACAAAGAGCGGGTCGTCAAACCACGCTCTTTGGGAACTCACCGCTGGGTCTGTCACCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAA > 4:359198/1‑106 AAAGAGCGGGTCGTCAAACCACGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGC > 4:132784/1‑149 AAAGAGCGGGTCGTCAAACCACGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGC > 4:1429643/1‑149 AAAGAGCGGGTCGTCAAACCACGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGA < 4:267841/79‑1 AAAGAGCGGGTCGTCAAACCACGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGA > 3:267841/1‑79 GCGGGTCGTCAAACCACGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGCGGCCT < 3:132784/149‑1 CGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACAC < 4:833749/123‑1 CGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGAGGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACAC > 3:833749/1‑123 GCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGCGGCCTGAAGTTTGAGCTGGCGG > 3:66496/1‑149 CTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGCGGCCTGAAGTTTGAGCTGGCGGC > 4:691522/1‑149 TTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAA > 1:1004872/1‑102 TTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAA < 2:1004872/102‑1 GCCGCGCGGTGTCTGGTGGTGCGGTTTATCCAGCAGCAGGTTGCTCATTTGCATCCACTCCGCCAGATTTTGCTCCATGCTGACCATCAGCGGTGTGGGCGACAGACCCAGCGGTGAGTTCACAAAGAGCGGGTCGTCAAACCACGCTCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3893052‑3892902‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctcttTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGCGGCCTGAAGTTTGAGCTGGCGGC > NC_000913/3892929‑3893072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |