| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4531319 | 150 (1.090) | 4 (0.030) | 4/220 | NT | 2.8% | coding (333/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| ? | NC_000913 | = 4531360 | 129 (0.960) | coding (292/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGCTCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4531169‑4531319‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGCATTAAGTCCTACCACTTTGCCAAAGGCGACGAGCGCACGCAGTCACCTTCTGTCGACAAACTGTGGATTGATATTGGTGCCAAAGACAAA < NC_000913/4531360‑4531214 AGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGCTCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCA < 3:651272/149‑1 CCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGCTCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGGCTGGTTCCATCGTCACCCTCACC > 4:136032/1‑149 CATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGCTCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCAT > 3:471538/1‑123 CATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGCTCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCAT < 4:471538/123‑1 TTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGCTCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGT < 3:136032/149‑1 GCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGG < 3:501215/90‑1 GCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGG > 4:501215/1‑90 ATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGCATTAAGTCCTACCACTTT < 3:568404/78‑1 ATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGCATTAAGTCCTACCACTTT > 4:568404/1‑78 ATGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGCATTAAGTCCTACCACATTGCCAAAGGCGACGAGCGCACGCAGTCACCTTCTGTCGACAAACTGTGGATTGATATTGGTGCCAAAGACAA < 4:980868/149‑1 TGGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGCATTAAGTCCTACCACTTTGCCAAAGGCGACGAGCGCACGCAGTCACCTTCTGTCGACAAACTGTGGATTGATATTGGTGCCAAAGACAAA < 1:1236714/149‑1 AGTGACAGGCGTACCGACCTGAATGCCCATCCGTATAGCGTCGTCTTTGTCTTTGGCACCAATATCAATCCACAGTTTGTCGACAGAAGGTGACTGCGTGCGCTCGTCGCCTTTGGCAAAGTGGTAGGACTTAATGCCGATACACCCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4531169‑4531319‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgGCTGGTTCCATCGTCACCCTCACCGGGGACAAAGGGCCAGTCATGGGGTGTATCGGCATTAAGTCCTACCACTTTGCCAAAGGCGACGAGCGCACGCAGTCACCTTCTGTCGACAAACTGTGGATTGATATTGGTGCCAAAGACAAA < NC_000913/4531360‑4531214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |