BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	209596 =	114 (0.830)	6 (0.050)	6/210	NT	5.8%	intergenic (+16/‑83)	accA/ldcC	acetyl‑CoA carboxylase, carboxytransferase, alpha subunit/lysine decarboxylase 2, constitutive
*	?	NC_000913	209624 =	88 (0.690)	6 (0.050)	6/210	NT	5.8%	intergenic (+44/‑55)	accA/ldcC	acetyl‑CoA carboxylase, carboxytransferase, alpha subunit/lysine decarboxylase 2, constitutive

Only 100 of 136 total aligned reads displayed.

ACCCGGAAGCGATGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCATTATGGGACCGCATGGCGTCTTTTATAAAGATGAGCCCATCAAAGAAC  >  NC_000913/209453‑209742

aCCCGGAAGCGATGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAg                                                                                                                                               <  3:1274197/149‑1 (MQ=255)

 cccGGAAGCGATGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAgg                                                                                                                                              <  2:205591/149‑1 (MQ=255)

 cccGGAAGCGATGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAgg                                                                                                                                              <  2:487980/149‑1 (MQ=255)

 cccGGAAGCGATGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAgg                                                                                                                                              <  3:253096/149‑1 (MQ=255)

            tGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGt                                                                                                                                   <  1:1022219/149‑1 (MQ=255)

              gcggcATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTgg                                                                                                                                 <  1:48177/149‑1 (MQ=255)

                   aTCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCgg                                                                                                                                    >  1:1359178/1‑141 (MQ=255)

                   aTCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCgg                                                                                                                                    <  2:1359178/141‑1 (MQ=255)

                    tCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCttt                                                                                                                           >  4:758369/1‑149 (MQ=255)

                     cGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCtttt                                                                                                                          <  3:508962/149‑1 (MQ=255)

                       ttGAAAGCGCCACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAg                                                                                                                                               <  1:251214/126‑1 (MQ=255)

                       ttGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAgg                                                                                                                                              <  4:308099/127‑1 (MQ=255)

                       ttGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAg                                                                                                                                               >  2:251214/1‑126 (MQ=255)

                       ttGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGt                                                                                                                                            <  3:890375/129‑1 (MQ=255)

                       ttGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCtttttt                                                                                                                        <  3:758369/149‑1 (MQ=255)

                          aaaGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATc                                                                                                                     >  2:1012141/1‑149 (MQ=255)

                                 aaCTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGcc                                                                                                                               <  3:211940/132‑1 (MQ=255)

                                 aaCTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGcc                                                                                                                               >  4:211940/1‑132 (MQ=255)

                                      tcatctttataaaagacgccatgcggtcccataatggcaatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataaaaaa                                                                                                                                                <  4:1357814‑M1/5‑1 (MQ=255)

                                      tcatctttataaaagacgccatgcggtcccataatggcaatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataaaaaa                                                                                                                                                >  3:1357814‑M1/106‑110 (MQ=255)

                                      ctgGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGa                                                                                                         <  1:1012141/149‑1 (MQ=255)

                                       tgGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGt                                                                                                                                            >  4:585142/1‑113 (MQ=255)

                                        ggCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCgg                                                                                                                                    >  2:742692/1‑120 (MQ=255)

                                        ggCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCgg                                                                                                                                    <  1:742692/120‑1 (MQ=255)

                                           ggATCTGGCCGATCTCGACGTGTTAAGCACTAAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGt                                                                                                                                            >  4:206287/1‑109 (MQ=255)

                                           ggATCTGGCCGATCTCGACGTGTTAAGCACTAAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGt                                                                                                                                            <  3:206287/109‑1 (MQ=255)

                                            ttataaaagacgccatgcggtcccataatggcaatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataAAAAAgg                                                                                                                                              <  1:1027880‑M1/7‑1 (MQ=255)

                                            ttataaaagacgccatgcggtcccataatggcaatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataAAAAAgg                                                                                                                                              >  2:1027880‑M1/100‑106 (MQ=255)

                                                 ggCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATg                                                                                               >  4:346206/1‑148 (MQ=255)

                                                 ggCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATg                                                                                               <  3:346206/148‑1 (MQ=255)

                                                    cGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCgg                                                                                                                                    <  4:505848/108‑1 (MQ=255)

                                                    cGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTa                                                                                           >  4:295380/1‑149 (MQ=255)

                                                     gATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaa                                                                                          <  3:1184772/149‑1 (MQ=255)

                                                     gATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaa                                                                                          >  4:1184772/1‑149 (MQ=255)

                                                       tctcGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaagg                                                                                        >  2:965058/1‑149 (MQ=255)

                                                       gccatgcggtcccataatggcgatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataAAAAAGGGTCACTTCGGTGGCCCtt                                                                                                                            <  1:60249‑M1/25‑1 (MQ=255)

                                                       gccatgcggtcccataatggcgatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataAAAAAGGGTCACTTCGGTGGCCCtt                                                                                                                            >  2:60249‑M1/89‑113 (MQ=255)

                                                           gACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaaggaagg                                                                                    >  1:392281/1‑149 (MQ=255)

                                                                tcccataatggcaatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataaaaaa                                                                                                                                                >  3:554351‑M1/80‑84 (MQ=255)

                                                                tcccataatggcaatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataaaaaa                                                                                                                                                <  4:554351‑M1/5‑1 (MQ=255)

                                                                   aaGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCa                                                                            <  1:965058/149‑1 (MQ=255)

                                                                    aGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCag                                                                           <  3:295380/149‑1 (MQ=255)

                                                                      cACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCagga                                                                         >  2:1151134/1‑149 (MQ=255)

                                                                       aCTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCaggag                                                                        >  1:658799/1‑149 (MQ=255)

                                                                          gcaatgatgttcatgtgttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataaaaaa                                                                                                                                                >  3:990292‑M1/70‑74 (MQ=255)

                                                                           aaGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTc                                                                                                                                      >  1:328112/1‑83 (MQ=255)

                                                                           aaGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTc                                                                                                                                      <  2:328112/83‑1 (MQ=255)

                                                                           aaGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAac                                                                    <  2:658799/149‑1 (MQ=255)

                                                                               tttAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGt                                                                                                                                   >  2:926914/1‑82 (MQ=255)

                                                                               tttAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGt                                                                                                                                   <  1:926914/82‑1 (MQ=255)

                                                                                ttAAGAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGc                                                                                                                   >  2:1172961/1‑97 (MQ=255)

                                                                                ttAAGAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGc                                                                                                                   <  1:1172961/97‑1 (MQ=255)

                                                                                    aaaaTCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaagg                                                                                        <  2:1120281/120‑1 (MQ=255)

                                                                                    aaaaTCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaagg                                                                                        >  1:1120281/1‑120 (MQ=255)

                                                                                    aaaaTCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCa                                                                            >  1:227140/1‑132 (MQ=255)

                                                                                    aaaaTCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCa                                                                            <  2:227140/132‑1 (MQ=255)

                                                                                      aaTCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCaggagg                                                                       >  2:669352/1‑135 (MQ=255)

                                                                                      aaTCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCaggagg                                                                       <  1:669352/135‑1 (MQ=255)

                                                                                      aaTCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAAcatc                                                         <  1:1151134/149‑1 (MQ=255)

                                                                                           ttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataaaa                                                                                                                                                  <  1:531474‑M1/3‑1 (MQ=255)

                                                                                           ttcctcctggaaaatccttccttaatcatagcctgctcaaaccgtggcgataaaa                                                                                                                                                  >  2:531474‑M1/53‑55 (MQ=255)

                                                                                           tcgtTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGa                                                                                                         >  3:981005/1‑96 (MQ=255)

                                                                                           tcgtTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGa                                                                                                         <  4:981005/96‑1 (MQ=255)

                                                                                              ttATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCAt                                                 >  1:475494/1‑149 (MQ=255)

                                                                                                 tCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCag                                                                           <  1:52264/120‑1 (MQ=255)

                                                                                                 tCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCag                                                                           >  2:52264/1‑120 (MQ=255)

                                                                                                      aaatccttccttaatcatagcctgctcaaaccgtggcgataAAAAAGGGTCACTTCGGTGGCCCttt                                                                                                                           <  4:804909‑M1/26‑1 (MQ=255)

                                                                                                      aaatccttccttaatcatagcctgctcaaaccgtggcgataAAAAAGGGTCACTTCGGTGGCCCttt                                                                                                                           >  3:804909‑M1/42‑67 (MQ=255)

                                                                                                       ccTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaaggaagg                                                                                    >  4:96899/1‑105 (MQ=255)

                                                                                                          gatgaGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaag                                                                                         <  1:1373892/97‑1 (MQ=255)

                                                                                                          gatgaGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaag                                                                                         >  2:1373892/1‑97 (MQ=255)

                                                                                                            tgaGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCATTATGGGACCGCATg                                   >  2:1256084/1‑149 (MQ=255)

                                                                                                             gaGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCgg                                                                                                                                    >  2:945219/1‑51 (MQ=255)

                                                                                                             gaGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCgg                                                                                                                                    <  1:945219/51‑1 (MQ=255)

                                                                                                               gCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAacac                                                                  <  3:1181247/115‑1 (MQ=255)

                                                                                                               gCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTCTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAacac                                                                  >  4:1181247/1‑115 (MQ=255)

                                                                                                                ttaatcatagcctgctcaaaccgtggcgataAAAAAGGGTCACTTCGGTGGCCCt                                                                                                                             <  3:1465302‑M1/24‑1 (MQ=255)

                                                                                                                ttaatcatagcctgctcaaaccgtggcgataAAAAAGGGTCACTTCGGTGGCCCt                                                                                                                             >  4:1465302‑M1/32‑55 (MQ=255)

                                                                                                                 tACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGaa                                                             >  4:1122148/1‑118 (MQ=255)

                                                                                                                   cGGTTACGCGTAATTCGCAAAAATTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCATTATGGGACCGCCTGGCGTCtt                            <  1:1256084/149‑1 (MQ=255)

                                                                                                                          gcgTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAac                                                                    <  4:1391061/102‑1 (MQ=255)

                                                                                                                          gcgTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAac                                                                    >  3:1391061/1‑102 (MQ=255)

                                                                                                                          gcgTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAAcatc                                                         <  4:699651/113‑1 (MQ=255)

                                                                                                                          gcgTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAAcatc                                                         >  3:699651/1‑113 (MQ=255)

                                                                                                                            gTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCATTATGGGACCGCATGGCGTCTTTTATAAAGa                   <  2:392281/149‑1 (MQ=255)

                                                                                                                                ttCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaag                                                                                         <  2:49457/75‑1 (MQ=255)

                                                                                                                                ttCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaag                                                                                         >  1:49457/1‑75 (MQ=255)

                                                                                                                                ttCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCaggag                                                                        >  3:342631/1‑92 (MQ=255)

                                                                                                                                ttCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCaggag                                                                        <  4:342631/92‑1 (MQ=255)

                                                                                                                                   gCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCagga                                                                         <  3:318837/88‑1 (MQ=255)

                                                                                                                                   gCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCATTATGGGa                                          <  3:1116016/119‑1 (MQ=255)

                                                                                                                                    cAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaaggaa                                                                                      >  4:572561/1‑74 (MQ=255)

                                                                                                                                    cAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTaaggaa                                                                                      <  3:572561/74‑1 (MQ=255)

                                                                                                                                    cAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCAtt                                                      <  3:1006976/106‑1 (MQ=255)

                                                                                                                                    cAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCAtt                                                      >  4:1006976/1‑106 (MQ=255)

                                                                                                                                         gTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGGACATCATTGCCATTATGGGACCGCATGGCGTCttt                           <  4:1423866/128‑1 (MQ=255)

                                                                                                                                         gTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGGACATCATTGCCATTATGGGACCGCATGGCGTCttt                           >  3:1423866/1‑128 (MQ=255)

                                                                                                                                         gTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCATTATGGGACCGCATGGCGTCTTTTATAAAGATGAGCCCATCaaa      <  2:475494/149‑1 (MQ=255)

                                                                                                                                             tGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCATTATGGGACCGCATGGCGTCTTTTATAAAGATGAGCCCATCAAAGAAc  >  1:222736/1‑149 (MQ=255)

                                                                                                                                               AAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTcc                                                                             >  3:595150‑M1/1‑72 (MQ=255)

ACCCGGAAGCGATGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAATTCGCAAAAGTTCTGAAAAAGGGTCACTTCGGTGGCCCTTTTTTATCGCCACGGTTTGAGCAGGCTATGATTAAGGAAGGATTTTCCAGGAGGAACACATGAACATCATTGCCATTATGGGACCGCATGGCGTCTTTTATAAAGATGAGCCCATCAAAGAAC  >  NC_000913/209453‑209742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.