New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40479464 (0.460)4 (0.030) 4/208 NT 6.1% coding (1092/1116 nt) yaiC diguanylate cyclase, cellulose regualtor
?NC_000913 = 404817 65 (0.510)coding (1115/1116 nt) yaiC diguanylate cyclase, cellulose regualtor

AATACATTACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGG  >  NC_000913/404651‑404941
                                                                                                                                               |                                                                                                                                                   
aaTACATTACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCg                                                                                                                                                >  1:430852/1‑149 (MQ=255)
      ttACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGa                                                                                                                                          >  3:1440771/1‑149 (MQ=255)
       tACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGaa                                                                                                                                         <  2:1099853/149‑1 (MQ=255)
       tACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGaa                                                                                                                                         <  4:177685/149‑1 (MQ=255)
       tACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGaa                                                                                                                                         <  1:760513/149‑1 (MQ=255)
        aCGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAg                                                                                                                                        <  4:1440771/149‑1 (MQ=255)
           tttGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTgg                                                                                                                                     <  2:430852/149‑1 (MQ=255)
                  aaTACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTcaggccgccacttcggtgcggtt                                                                                                                              <  4:383407‑M1/149‑24 (MQ=255)
                         cacaGGTAACTTTGCGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTcaggccgccacttcggtgcggttacgtccg                                                                                                                       <  3:1163343‑M1/149‑31 (MQ=255)
                              gTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTCACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGaa                                                                                                                  >  2:890962/1‑149 (MQ=255)
                                          aTTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGt                                                                                                                                       <  3:625306/116‑1 (MQ=255)
                                          aTTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGt                                                                                                                                       >  4:625306/1‑116 (MQ=255)
                                                  gggggTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGGAAGtcatca                                                                                                          >  4:1337201/1‑137 (MQ=255)
                                                  gggggTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGtcatca                                                                                                          <  3:1337201/137‑1 (MQ=255)
                                                   ggggTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTcaggccgccacttcggtgcggttac                                                                                                                            <  4:910569‑M1/118‑26 (MQ=255)
                                                   ggggTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTcaggccgccacttcggtgcggttac                                                                                                                            >  3:910569‑M1/1‑93 (MQ=255)
                                                              gcTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTggcggc                                                                                                                                 >  3:1116989/1‑102 (MQ=255)
                                                              gcTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTggcggc                                                                                                                                 <  4:1116989/102‑1 (MQ=255)
                                                                     ccACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGacgtcc                                                                                                                        <  2:1003803‑M2/104‑7 (MQ=255)
                                                                     ccACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGacgtcc                                                                                                                        >  1:1003803‑M2/1‑98 (MQ=255)
                                                                     ccACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGAt                                                                                                      >  4:974701/1‑122 (MQ=255)
                                                                     ccACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGAt                                                                                                      <  3:974701/122‑1 (MQ=255)
                                                                     ccACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATa                                                                           >  1:123918/1‑149 (MQ=255)
                                                                     ccACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATa                                                                           >  1:458943/1‑149 (MQ=255)
                                                                      cacaAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATac                                                                          >  1:1405931/1‑149 (MQ=255)
                                                                       acaAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATaca                                                                         >  1:1135977/1‑149 (MQ=255)
                                                                           aTGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTc                                                                                        <  4:1324494/130‑1 (MQ=255)
                                                                           aTGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTc                                                                                        >  3:1324494/1‑130 (MQ=255)
                                                                             gAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGt                                                                   <  2:123918/149‑1 (MQ=255)
                                                                               gTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGt                                                                                             <  2:279766/121‑1 (MQ=255)
                                                                               gTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGt                                                                                             >  1:279766/1‑121 (MQ=255)
                                                                                tCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGtcatc                                                                                                           >  4:1062305/1‑106 (MQ=255)
                                                                                tCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGtcatc                                                                                                           <  3:1062305/106‑1 (MQ=255)
                                                                                tCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCAt                                                                >  3:477825/1‑149 (MQ=255)
                                                                                   cTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTTCACAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCAGCAGGATTTGCTGa                                                                                               <  4:946978/115‑1 (MQ=255)
                                                                                   cTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGa                                                                                               >  3:946978/1‑115 (MQ=255)
                                                                                               gTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGttttt                                                                                         >  4:457401/1‑109 (MQ=255)
                                                                                               gTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGttttt                                                                                         <  3:457401/109‑1 (MQ=255)
                                                                                                ttGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGtt                                                                                            >  4:1232938/1‑105 (MQ=255)
                                                                                                ttGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGtt                                                                                            <  3:1232938/105‑1 (MQ=255)
                                                                                                ttGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATc                                                               <  2:462011/134‑1 (MQ=255)
                                                                                                ttGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATc                                                               >  1:462011/1‑134 (MQ=255)
                                                                                                ttGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCAc                                                    <  1:1035423/145‑1 (MQ=255)
                                                                                                ttGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCAc                                                    >  2:1035423/1‑145 (MQ=255)
                                                                                                    aaTCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCAc                                            >  3:319535/1‑149 (MQ=255)
                                                                                                        ggCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGa                                                        >  4:1207389/1‑133 (MQ=255)
                                                                                                        ggCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGa                                                        <  3:1207389/133‑1 (MQ=255)
                                                                                                        ggCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGaa                                        <  4:477825/149‑1 (MQ=255)
                                                                                                         gCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAg                                       >  3:119120/1‑149 (MQ=255)
                                                                                                          cAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGc                                      <  3:548339/149‑1 (MQ=255)
                                                                                                          cAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGc                                      >  4:548339/1‑149 (MQ=255)
                                                                                                           aGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTc                                                                                        <  2:448608/98‑1 (MQ=255)
                                                                                                           aGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTc                                                                                        >  1:448608/1‑98 (MQ=255)
                                                                                                            gATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGacgtccgg                                                                                                                      >  3:1199504‑M2/1‑59 (MQ=255)
                                                                                                            gATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGacgtccgg                                                                                                                      <  4:1199504‑M2/67‑9 (MQ=255)
                                                                                                              tttGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCttt                                  <  2:1405931/149‑1 (MQ=255)
                                                                                                               ttGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTtc                                 <  4:319535/149‑1 (MQ=255)
                                                                                                                 ggCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTtctc                               <  2:458943/149‑1 (MQ=255)
                                                                                                                    gcTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATaca                                                                         >  1:592764/1‑104 (MQ=255)
                                                                                                                    gcTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATaca                                                                         <  2:592764/104‑1 (MQ=255)
                                                                                                                             agcaaagAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAGGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTc                            >  1:941375/1‑140 (MQ=255)
                                                                                                                             agcaaagAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGTTTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCttt                                  >  1:1092634/1‑134 (MQ=255)
                                                                                                                             agcaaagAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCttt                                  <  2:1092634/134‑1 (MQ=255)
                                                                                                                             agcaaagAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTc                            <  2:941375/140‑1 (MQ=255)
                                                                                                                              gcaaagAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTc                                                          <  4:102663/109‑1 (MQ=255)
                                                                                                                              gcaaagAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTc                                                          >  3:102663/1‑109 (MQ=255)
                                                                                                                                aaagaaagCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTAc                >  2:263902/1‑149 (MQ=255)
                                                                                                                                      agCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTc          <  2:1135977/149‑1 (MQ=255)
                                                                                                                                        ccGGACGTcaggccgccacttcggtgcggttacgtccggctttctttgctttgtaaagcgccaaatc                                                                                          >  3:1199504‑M1/1‑8 (MQ=255)
                                                                                                                                        ccGGACGTcaggccgccacttcggtgcggttacgtccggctttctttgctttgtaaagcgccaaatc                                                                                          <  4:1199504‑M1/67‑60 (MQ=255)
                                                                                                                                        ccGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCtt           <  4:1211559/146‑1 (MQ=255)
                                                                                                                                        ccGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCtt           >  3:1211559/1‑146 (MQ=255)
                                                                                                                                         cGGACGTAACCGCACCGAAGTGGCGGCCTGacgtccggctttctttgctttgtaaagcgccaaatctgccgatttcaaccactcacgatagtgactcatttgtgggttcagcggcgcaacccccacactaatccgcaaagttacctgtg       <  3:1163343‑M2/149‑120 (MQ=255)
                                                                                                                                         cGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAAt       >  4:979449/1‑149 (MQ=255)
                                                                                                                                          ggACGTcaggccgccacttcggtgcggttacgtccggctttctttgctttgtaaagcgccaaatctgccgatttcaaccactcacgatagtgactcatttgtgg                                                   <  2:1003803‑M1/104‑99 (MQ=255)
                                                                                                                                          ggACGTcaggccgccacttcggtgcggttacgtccggctttctttgctttgtaaagcgccaaatctgccgatttcaaccactcacgatagtgactcatttgtgg                                                   >  1:1003803‑M1/1‑6 (MQ=255)
                                                                                                                                          ggACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCt                                    >  4:1091143/1‑119 (MQ=255)
                                                                                                                                          ggACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCt                                    <  3:1091143/119‑1 (MQ=255)
                                                                                                                                           gACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTc                                                                                        <  4:366521/66‑1 (MQ=255)
                                                                                                                                           gACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTc                                                                                        >  3:366521/1‑66 (MQ=255)
                                                                                                                                             cGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAAtggtg   <  4:119120/149‑1 (MQ=255)
                                                                                                                                             cGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAAtggtg   <  1:263902/149‑1 (MQ=255)
                                                                                                                                              gTAACCGCACCGAAGTGGCGGCCTGacgtccggctttctttgctttgtaaagcgccaaatctgccgatttcaaccactcacgatagtgactcatttgtgggttcagcggcgcaacccc                                 >  3:910569‑M2/1‑25 (MQ=255)
                                                                                                                                              gTAACCGCACCGAAGTGGCGGCCTGacgtccggctttctttgctttgtaaagcgccaaatctgccgatttcaaccactcacgatagtgactcatttgtgggttcagcggcgcaacccc                                 <  4:910569‑M2/118‑94 (MQ=255)
                                                                                                                                              gTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAAtggtgg  >  4:115326/1‑149 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
AATACATTACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGACGTCCGGCGAAAGTCATCAGGATTTGCTGAGTTTTTCTGATTTTTCCATACACTTCGTCATCGCTTCGATCACTGCAGCACGGAAGCCTTTCTCTTCCAGTACGCGTACCGCTTCAATGGTGG  >  NC_000913/404651‑404941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.