New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 668251108 (0.780)18 (0.140) 14/208 NT 14.8% coding (465/468 nt) rlmH 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM‑dependent
?NC_000913 = 668256 108 (0.850)coding (460/468 nt) rlmH 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM‑dependent

Only 100 of 168 total aligned reads displayed.

AGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAA  >  NC_000913/668114‑668394
                                                                                                                                         |                                                                                                                                               
aGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgata                                                                                                                                      >  3:453725‑M1/1‑138 (MQ=255)
 gCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataa                                                                                                                                     <  4:453725‑M1/149‑13 (MQ=255)
 gCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataa                                                                                                                                     >  3:732596‑M1/1‑137 (MQ=255)
 gCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataa                                                                                                                                     >  1:542911‑M2/1‑142 (MQ=255)
 gCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataa                                                                                                                                     >  2:244630‑M2/1‑142 (MQ=255)
  cACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACCgtgataag                                                                                                                                    >  3:1350284‑M2/1‑141 (MQ=255)
                gcaAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGgtggtg                                                                                                                      >  2:488743/1‑149 (MQ=255)
                   aaaTCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataag                                                                                                                                    <  3:179754‑M1/132‑14 (MQ=255)
                   aaaTCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataag                                                                                                                                    >  4:179754‑M1/1‑119 (MQ=255)
                        cccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataag                                                                                                                                    <  1:847221‑M1/127‑14 (MQ=255)
                        cccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCa                                                                                                              >  4:237944/1‑149 (MQ=255)
                         ccAAAAAGGCGACCAGCGCCCGTCGCACAAACAGCGCGGACTCTGCGGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGttggtg                                                                                                                      <  1:416648/140‑1 (MQ=255)
                         ccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCTCTTTCTACTCAAAGCTCCCTTATCACTCCCGGTGATAAGGATGGTTGGTGGTGATGTTCCAc                                                                                                             <  4:1250115/149‑1 (MQ=255)
                         ccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataaggg                                                                                                                                  <  4:715228‑M1/128‑16 (MQ=255)
                         ccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataaggg                                                                                                                                  >  3:715228‑M1/1‑113 (MQ=255)
                         ccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGc                                                                                                                  <  4:1134629/144‑1 (MQ=255)
                         ccAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGc                                                                                                                  >  3:1134629/1‑144 (MQ=255)
                          cAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGc                                                                                                                  <  1:944079/143‑1 (MQ=255)
                          cAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGc                                                                                                                  >  2:944079/1‑143 (MQ=255)
                            aaaaGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGa                                                                                                                     >  2:267207/1‑138 (MQ=255)
                            aaaaGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGcc                                                                                                          >  1:249428/1‑149 (MQ=255)
                               aGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggttggt                                                                                                                          >  2:915474/1‑130 (MQ=255)
                               aGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCgg                                                                                                       <  2:249428/149‑1 (MQ=255)
                                     ccAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGccc                                                                                                         <  1:690053/141‑1 (MQ=255)
                                       aGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTGACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGAct                                                                                               >  3:1208579/1‑149 (MQ=255)
                                                  cacaAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCa                                                                                    <  4:1208579/149‑1 (MQ=255)
                                                    caAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACg                                                                                                                                            <  4:1072917/91‑1 (MQ=255)
                                                     aaaCAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataagg                                                                                                                                   <  2:546408‑M1/99‑15 (MQ=255)
                                                       aCAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataa                                                                                                                                     >  1:295616‑M1/1‑83 (MQ=255)
                                                          gcgcGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGa                                                                            >  4:102290/1‑149 (MQ=255)
                                                                   ctGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataagg                                                                                                                                   <  1:875990‑M2/85‑10 (MQ=255)
                                                                   ctGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGgtgataagg                                                                                                                                   >  2:875990‑M2/1‑76 (MQ=255)
                                                                   ctGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGc                                                                      >  1:264186/1‑146 (MQ=255)
                                                                    tGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGa                                                                                                                     <  2:764532/98‑1 (MQ=255)
                                                                    tGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGa                                                                                                                     >  1:764532/1‑98 (MQ=255)
                                                                    tGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGt                                                                                                      >  3:88612/1‑113 (MQ=255)
                                                                    tGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGt                                                                                                      <  4:88612/113‑1 (MQ=255)
                                                                              tCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGAtggtt                                                                                                                             <  1:611901/80‑1 (MQ=255)
                                                                              tCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGccc                                                                                                         >  3:839857/1‑100 (MQ=255)
                                                                              tCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAgg                                                          >  1:938239/1‑147 (MQ=255)
                                                                                gcgAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataaggga                                                                                                                                 >  1:139114‑M1/1‑58 (MQ=255)
                                                                                   aaaaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAgg                                                          <  4:788209/142‑1 (MQ=255)
                                                                                    aaaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGa                                                                                                                                  <  4:542447/69‑1 (MQ=255)
                                                                                    aaaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGa                                                                                                                                  >  3:542447/1‑69 (MQ=255)
                                                                                    aaaGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAgcgc                                                  <  2:600476/149‑1 (MQ=255)
                                                                                          ttCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGActc                                                                                              <  3:252928/99‑1 (MQ=255)
                                                                                          ttCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGActc                                                                                              >  4:252928/1‑99 (MQ=255)
                                                                                          ttCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGa                                                            <  3:1097411/133‑1 (MQ=255)
                                                                                          ttCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGa                                                            <  2:306493/133‑1 (MQ=255)
                                                                                          ttCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGa                                                            >  1:306493/1‑133 (MQ=255)
                                                                                          ttCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAg                                            >  2:1024165/1‑149 (MQ=255)
                                                                                          ttCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAg                                            >  1:1049308/1‑149 (MQ=255)
                                                                                             tGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACcgtgagtgataag                                                                                                                                    <  4:1409844‑M1/58‑14 (MQ=255)
                                                                                             tGTAGTTTCATCCGCTGCGTTTCCTACTCAAAGCTCCCTTATCACcgtgagtgataag                                                                                                                                    >  3:1409844‑M1/1‑45 (MQ=255)
                                                                                              gTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAgg                                                          <  1:1277673/131‑1 (MQ=255)
                                                                                              gTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAgg                                                          >  2:1277673/1‑131 (MQ=255)
                                                                                                       tCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATgg                                                                <  4:32612/116‑1 (MQ=255)
                                                                                                       tCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATgg                                                                >  3:32612/1‑116 (MQ=255)
                                                                                                       tCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGcc                                                 <  2:1430699/131‑1 (MQ=255)
                                                                                                       tCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGc                                           <  3:743318/137‑1 (MQ=255)
                                                                                                       tCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGc                                           >  4:743318/1‑137 (MQ=255)
                                                                                                               gTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAgccgc                       >  1:1295303/1‑149 (MQ=255)
                                                                                                                   tCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCt                   >  1:1418197/1‑149 (MQ=255)
                                                                                                                     tACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCa                                                                                    <  2:536656/82‑1 (MQ=255)
                                                                                                                     tACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCa                                                                                    >  1:536656/1‑82 (MQ=255)
                                                                                                                      aCTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCa                                                                                    >  3:502131/1‑81 (MQ=255)
                                                                                                                      aCTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTa                >  1:12340/1‑149 (MQ=255)
                                                                                                                       cTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGa                                                                   >  1:1103278/1‑97 (MQ=255)
                                                                                                                       cTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGa                                                                   <  2:1103278/97‑1 (MQ=255)
                                                                                                                       cTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAc               <  1:1024165/149‑1 (MQ=255)
                                                                                                                        tCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATgggg                                                              <  1:1187533/101‑1 (MQ=255)
                                                                                                                        tCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATgggg                                                              >  2:1187533/1‑101 (MQ=255)
                                                                                                                        tCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAca              >  1:669189/1‑149 (MQ=255)
                                                                                                                          aaaGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGa                                                            >  2:1350833/1‑101 (MQ=255)
                                                                                                                          aaaGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGAc                                        <  1:1391474/121‑1 (MQ=255)
                                                                                                                          aaaGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCtt                  <  1:17951/143‑1 (MQ=255)
                                                                                                                            aGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAcaggca          <  2:1418197/149‑1 (MQ=255)
                                                                                                                               tCCCTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgc                                                                                  <  2:139114‑M2/74‑59 (MQ=255)
                                                                                                                               tCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGctc                                  >  3:91527/1‑122 (MQ=255)
                                                                                                                                cccTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttgg                           <  4:715228‑M2/128‑114 (MQ=255)
                                                                                                                                 ccTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgttt                                                       >  1:546408‑M2/1‑14 (MQ=255)
                                                                                                                                 ccTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGa     >  3:347321/1‑149 (MQ=255)
                                                                                                                                 ccTTACCGCTCACGATGATAAGGGTGGTTGGCGGTGATGATCCAAGCCCGGTACAGACTCGCTGCGACCAGCACGCGAACCACCGCATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGa     <  2:669189/149‑1 (MQ=255)
                                                                                                                                  cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggggattttgctgctgaccggcgtg    <  4:732596‑M2/149‑137 (MQ=255)
                                                                                                                                  cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggggattt                     <  3:179754‑M2/132‑120 (MQ=255)
                                                                                                                                  cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggg                          <  1:847221‑M2/127‑115 (MQ=255)
                                                                                                                                  cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggg                          >  2:847221‑M2/1‑13 (MQ=255)
                                                                                                                                  cTTATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactaca                                                                                               <  4:1409844‑M2/58‑46 (MQ=255)
                                                                                                                                  cTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTa                <  2:746145/137‑1 (MQ=255)
                                                                                                                                  cTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGAc    >  2:1105665/1‑149 (MQ=255)
                                                                                                                                   ttATCACcgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccggtcgctggtcgcctttttggggattttgctgctgaccggcgtgc   >  1:1191133‑M1/1‑7 (MQ=255)
                                                                                                                                   ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggggattttgctgctgaccggcgtgc   <  4:453725‑M2/149‑138 (MQ=255)
                                                                                                                                   ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcgctggtcgcctttttggggattttgctgctgaccggcgtgc   >  3:732596‑M2/1‑12 (MQ=255)
                                                                                                                                   ttATCACTCACGgtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgt                                                         <  2:295616‑M2/95‑84 (MQ=255)
                                                                                                                                   ttATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACa   >  1:544485/1‑149 (MQ=255)
                                                                                                                                    tATCACcgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcg                                           >  3:930020‑M1/1‑6 (MQ=255)
                                                                                                                                    tATCACcgtgagtgataagggagctttgagtagaaaacgcagcggatgaaactacagaactcttttcgcgactatacggcagagtccgcgctgtttgtgcgccgggcg                                           <  4:930020‑M1/108‑103 (MQ=255)
                                                                                                                                    tATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGa     <  2:182442/146‑1 (MQ=255)
                                                                                                                                         ctcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAcaggc           >  4:1392891/1‑135 (MQ=255)
                                                                                                                                         ctcacGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTAcaggc           <  3:1392891/135‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                               
AGCACGCCGGTCAGCAGCAAAATCCCCAAAAAGGCGACCAGCGCCCGGCGCACAAACAGCGCGGACTCTGCCGTATAGTCGCGAAAAGAGTTCTGTAGTTTCATCCGCTGCGTTTTCTACTCAAAGCTCCCTTATCACTCACGGTGATAAGGATGGTTGGTGGTGATGCTCCACGCCCGGTACAGACTCTCTGCGACCAGCACGCGAACCAGCGGATGGGGGAGGGTAAGCGCCGACAGCGACCAGCTCTGCTCAGCCGCCGCTTTACAGGCAGGCGACAA  >  NC_000913/668114‑668394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.