BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	717086 =	165 (1.200)	8 (0.060)	7/212	NT	5.0%	coding (1180/1320 nt)	potE	putrescine/proton symporter: putrescine/ornithine antiporter
*	?	NC_000913	717119 =	147 (1.140)	8 (0.060)	7/212	NT	5.0%	coding (1147/1320 nt)	potE	putrescine/proton symporter: putrescine/ornithine antiporter

Only 100 of 206 total aligned reads displayed.

TTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAG  >  NC_000913/716938‑717233

agtggattggcactgatgaccattagcccgtcgctaaacagtcagttcaacgtgctggttaacctggccgtggtgaccaatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctc                                                                                                                                                     >  3:615416‑M1/149‑149 (MQ=255)

 gtggattggcactgatgaccattagcccgtcgctaaacagtcagttcaacgtgctggttaacctggccgtggtgaccaatatcattccgtatattctgtcaatggcggcattagtcattattcagagggtcgctaatgtgcccccctCa                                                                                                                                                    <  1:1207681‑M1/2‑1 (MQ=255)

    gattggcactgatgaccattagcccgtcgctaaacagtcagttcaacgtgctggttaacctggccgtggtgaccaatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctCaaaa                                                                                                                                                 >  1:436903‑M1/145‑149 (MQ=255)

       attaACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGca                                                                                                                                              <  1:13398/149‑1 (MQ=255)

         gcactgatgaccattagcccgtcgctaaacagtcagttcaacgtgctggttaacctggccgtggtgaccaatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctCaaa                                                                                                                                                  <  4:1091112‑M1/4‑1 (MQ=255)

         gcactgatgaccattagcccgtcgctaaacagtcagttcaacgtgctggttaacctggccgtggtgaccaatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctCaaa                                                                                                                                                  >  3:1091112‑M1/140‑143 (MQ=255)

           aCCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGcaacaa                                                                                                                                          >  3:98315/1‑149 (MQ=255)

                            gTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCTAACAAAAGCAACAAAGTTGGCAACTTTCGCt                                                                                                                         >  2:28276/1‑149 (MQ=255)

                            gTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCt                                                                                                                         <  2:474725/149‑1 (MQ=255)

                            gTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCt                                                                                                                         >  1:474725/1‑149 (MQ=255)

                                 aaGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGttt                                                                                                                                     >  3:1062186/1‑132 (MQ=255)

                                  taaacagtcagttcaacgtgctggttaacctggccgtggtgaccaatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctCAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGa                                                                                                                    <  1:1092736‑M1/34‑1 (MQ=255)

                                   gCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGcaa                                                                                                                                             >  2:1164838/1‑122 (MQ=255)

                                   gCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGcaa                                                                                                                                             <  1:1164838/122‑1 (MQ=255)

                                   gCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAgg                                                                                                                  <  3:1246962/149‑1 (MQ=255)

                                        gtcagttcaacgtgctggttaacctggccgtggtgaccaatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctCaaaa                                                                                                                                                 >  2:901528‑M1/109‑113 (MQ=255)

                                             aCCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGcaac                                                                                                                                            >  4:490967/1‑113 (MQ=255)

                                             aCCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGcaac                                                                                                                                            <  3:490967/113‑1 (MQ=255)

                                             aCCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACAtt                                                                                                        >  2:1076307/1‑149 (MQ=255)

                                              ccAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTa                                                                                                       >  3:419166/1‑149 (MQ=255)

                                              ccAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTa                                                                                                       >  4:784005/1‑149 (MQ=255)

                                                    cATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGAcc                                                                                                 >  3:817653/1‑149 (MQ=255)

                                                     aTACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCt                                                                                                >  4:608536/1‑149 (MQ=255)

                                                      tACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTa                                                                                                       >  4:16571/1‑141 (MQ=255)

                                                         aGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAgggggg                                                                                                              <  1:900293/131‑1 (MQ=255)

                                                              ccaaccaaGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGaataa                                                                                       <  1:1076307/149‑1 (MQ=255)

                                                                 accaaGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCATCTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGa                                                                                    <  3:1298389/149‑1 (MQ=255)

                                                                 accaaGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGa                                                                                    >  1:883646/1‑149 (MQ=255)

                                                                  ccaaGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAgggg                                                                                                                <  1:564818/120‑1 (MQ=255)

                                                                  ccaaGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAgggg                                                                                                                >  2:564818/1‑120 (MQ=255)

                                                                   caaGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGaa                                                                                          <  2:1199378/141‑1 (MQ=255)

                                                                    aaggaaggTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGa                                                                                    <  1:1019512/146‑1 (MQ=255)

                                                                           gTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATgccgc                                                                          >  1:829354/1‑149 (MQ=255)

                                                                           gTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATgccgc                                                                          <  3:166695/149‑1 (MQ=255)

                                                                           gTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATgccgc                                                                          <  3:604372/149‑1 (MQ=255)

                                                                           accaatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctCaaaa                                                                                                                                                 >  2:419110‑M1/74‑78 (MQ=255)

                                                                           accaatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctCaaaa                                                                                                                                                 <  1:419110‑M1/5‑1 (MQ=255)

                                                                            tCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATgccgcc                                                                         >  3:219416/1‑149 (MQ=255)

                                                                            tCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATgccgcc                                                                         >  2:134865/1‑149 (MQ=255)

                                                                              aatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctc                                                                                                                                                     <  3:762285‑M1/1‑1 (MQ=255)

                                                                              aatatcattccgtatattctgtcaatggcggcattagtcattattcagaaggtcgctaatgtgcccccctc                                                                                                                                                     >  4:762285‑M1/71‑71 (MQ=255)

                                                                              aCGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCAt                                                                       >  3:641548/1‑149 (MQ=255)

                                                                              aCGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCAt                                                                       <  3:784005/149‑1 (MQ=255)

                                                                                   ggAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACaaaa                                                                                                                                                 >  4:371407/1‑70 (MQ=255)

                                                                                               cATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGaa                                                      <  2:829354/149‑1 (MQ=255)

                                                                                                  ggCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAgggg                                                                                                                <  1:303882/88‑1 (MQ=255)

                                                                                                  ggCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGTGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGa                                                   >  3:1120031/1‑149 (MQ=255)

                                                                                                    cttcttCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGata                                                 <  4:641548/149‑1 (MQ=255)

                                                                                                     ttcttcCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGaataa                                                                                       >  2:537377/1‑110 (MQ=255)

                                                                                                     ttcttcCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGaataa                                                                                       <  1:537377/110‑1 (MQ=255)

                                                                                                     ttcttcCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGatat                                                <  4:1120031/149‑1 (MQ=255)

                                                                                                        ttcCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTgg                                             >  4:1363726/1‑149 (MQ=255)

                                                                                                           cccGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAg                                                                                                                   >  2:747424/1‑76 (MQ=255)

                                                                                                           cccGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAg                                                                                                                   <  1:747424/76‑1 (MQ=255)

                                                                                                              ggATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGc                                                                                                                          >  1:358333/1‑66 (MQ=255)

                                                                                                              ggATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGc                                                                                                                          <  2:358333/66‑1 (MQ=255)

                                                                                                              ggATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTc                                                                                              <  4:446330/94‑1 (MQ=255)

                                                                                                               gATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAgg                                                                                                                  <  1:1314966/73‑1 (MQ=255)

                                                                                                               gATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAgg                                                                                                                  >  2:1314966/1‑73 (MQ=255)

                                                                                                               gATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTcaccac                                      <  4:814/149‑1 (MQ=255)

                                                                                                                    gTACAGCGCATAAGAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCa                                 >  4:820064/1‑149 (MQ=255)

                                                                                                                    gTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATAc                                                          >  4:1238529/1‑124 (MQ=255)

                                                                                                                     tACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATAc                                                          <  2:886063/123‑1 (MQ=255)

                                                                                                                     tACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAg                                <  4:184304/149‑1 (MQ=255)

                                                                                                                           gcATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAg                                >  4:1317916/1‑143 (MQ=255)

                                                                                                                             aTAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCa                        >  2:107959/1‑149 (MQ=255)

                                                                                                                             aTAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCa                        >  4:1264558/1‑149 (MQ=255)

                                                                                                                               aaaaGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGa                                                                    >  3:1499/1‑103 (MQ=255)

                                                                                                                               aaaaGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAAc                          <  2:366128/145‑1 (MQ=255)

                                                                                                                               aaaaGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAAc                          >  1:366128/1‑145 (MQ=255)

                                                                                                                                aaaGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACt                                                                                  <  2:1025179/88‑1 (MQ=255)

                                                                                                                                aaaGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCa                     >  4:1069501/1‑149 (MQ=255)

                                                                                                                                 aaGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCAc                    >  4:950008/1‑149 (MQ=255)

                                                                                                                                    cTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGc                                                                                                     <  1:928828/65‑1 (MQ=255)

                                                                                                                                    cTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGtt                 >  2:1412033/1‑149 (MQ=255)

                                                                                                                                     tataCATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGa                                                                                    >  3:829636/1‑81 (MQ=255)

                                                                                                                                     tataCATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGa                                                                                    <  4:829636/81‑1 (MQ=255)

                                                                                                                                      ataCATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGa               <  3:1186881/149‑1 (MQ=255)

                                                                                                                                       taCATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTg                                              >  3:1454320/1‑117 (MQ=255)

                                                                                                                                       taCATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTg                                              <  4:1454320/117‑1 (MQ=255)

                                                                                                                                       taCATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGaa              <  3:950008/149‑1 (MQ=255)

                                                                                                                                       taCATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGaa              <  3:1363726/149‑1 (MQ=255)

                                                                                                                                          aTCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTaa                                                                                <  3:652705/80‑1 (MQ=255)

                                                                                                                                          aTCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTaa                                                                                >  4:652705/1‑80 (MQ=255)

                                                                                                                                          aTCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCAtt                                                                      <  4:1325984/90‑1 (MQ=255)

                                                                                                                                          aTCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCAtt                                                                      >  3:1325984/1‑90 (MQ=255)

                                                                                                                                          aTCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATg                                                    <  4:592519/108‑1 (MQ=255)

                                                                                                                                          aTCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTaa                           <  1:181537/133‑1 (MQ=255)

                                                                                                                                          aTCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTaa                           >  2:181537/1‑133 (MQ=255)

                                                                                                                                           tCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAactga          >  1:1274098/1‑149 (MQ=255)

                                                                                                                                            cgcgCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGa                                                   <  4:930669/107‑1 (MQ=255)

                                                                                                                                            cgcgCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAAGGa                                                   >  3:930669/1‑107 (MQ=255)

                                                                                                                                              cgcCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGCCACCACGGCCAGGTTAACCAGCACGTTGAactgactg       >  4:335209/1‑149 (MQ=255)

                                                                                                                                                 caacaaAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCCTTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGtt                 >  3:1412185/1‑136 (MQ=255)

                                                                                                                                                 caacaaAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGt                  <  3:37075/135‑1 (MQ=255)

                                                                                                                                                 caacaaAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGACGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGtt                 <  4:1412185/136‑1 (MQ=255)

                                                                                                                                                   acaaAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCAt                                                                       >  4:787950/1‑80 (MQ=255)

                                                                                                                                                   acaaAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCAt                                                                       <  3:787950/80‑1 (MQ=255)

                                                                                                                                                   acaaAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGAc                                                                   >  2:1246287/1‑84 (MQ=255)

                                                                                                                                                   acaaAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGAc                                                                   <  1:1246287/84‑1 (MQ=255)

TTGTTTTATTAACCGTGTTTATTTTTCAGTTCAAAGCGTGGTGATACCAGACCATACAGTGTCCAACCAAGGAAGGTCACGATGGAACCGTACAGCATGGCTTCTTCCCCGGATGAGTACAGCGCATAAAAGCTATACATCGCGCCAACAAAAGCAACAAAGTTTGCAACTTTCGCTTTTGAGGGGGGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAG  >  NC_000913/716938‑717233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.