BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1420816	102 (0.740)	13 (0.100)	12/212	NT	11.6%	coding (133/423 nt)	ydaT	Rac prophage; uncharacterized protein
*	?	NC_000913	= 1420823	102 (0.790)	13 (0.100)	12/212	NT	11.6%	coding (140/423 nt)	ydaT	Rac prophage; uncharacterized protein

Only 100 of 164 total aligned reads displayed.

AAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGACTCTGCATCTTCGA  >  NC_000913/1420668‑1420961

    ggCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCaa                                                                                                                                               <  4:730671/149‑1 (MQ=255)

           gATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGActgg                                                                                                                                        >  1:164760‑M2/1‑145 (MQ=255)

             ttCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAATAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGActggaa                                                                                                                                      <  2:1190892‑M2/149‑7 (MQ=255)

             ttCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCGGGCAAGGActggaa                                                                                                                                      >  1:1097473‑M2/1‑143 (MQ=255)

             ttCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGtccttgcctggaa                                                                                                                                      <  1:1261810‑M1/149‑14 (MQ=255)

                 tGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAAt                                                                                                                                  >  3:911582/1‑149 (MQ=255)

                    aaaTCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATcag                                                                                                                               <  4:911582/149‑1 (MQ=255)

                     aaTCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATcagc                                                                                                                              >  3:990230/1‑149 (MQ=255)

                     aaTCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATcagc                                                                                                                              >  1:903590/1‑149 (MQ=255)

                          aGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAat                                                                                                                         <  2:1091492/149‑1 (MQ=255)

                                 gCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAAtatct                                                                                                                     <  1:779541/146‑1 (MQ=255)

                                 gCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAAtatct                                                                                                                     >  2:779541/1‑146 (MQ=255)

                                    caTCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCAcc                                                                                                               >  4:1261390/1‑149 (MQ=255)

                                     aTCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAG                                                                                                                                                   >  3:581686‑M1/1‑112 (MQ=255)

                                     aTCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAG                                                                                                                                                   <  4:581686‑M1/112‑1 (MQ=255)

                                     aTCGAATCAGTGTTGTTTACCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCaa                                                                                                                                               >  2:1132305/1‑116 (MQ=255)

                                      tCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAGTGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCgt                                                                                                             >  1:1078268/1‑149 (MQ=255)

                                        gAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGActgg                                                                                                                                        <  1:1386239‑M2/120‑5 (MQ=255)

                                        gAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGActgg                                                                                                                                        >  2:1386239‑M2/1‑116 (MQ=255)

                                        gAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCgttg                                                                                                           >  3:143372/1‑149 (MQ=255)

                                           tCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCgttggtt                                                                                                        <  2:931165/149‑1 (MQ=255)

                                           tCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAG                                                                                                                                                   >  2:179929‑M1/1‑106 (MQ=255)

                                           tCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAG                                                                                                                                                   <  1:179929‑M1/106‑1 (MQ=255)

                                               tgttgtTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATca                                                                                                                                <  4:1105181/121‑1 (MQ=255)

                                               tgttgtTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATca                                                                                                                                >  3:1105181/1‑121 (MQ=255)

                                               tgttgtTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATc                                                                                                                                 >  1:1410417/1‑120 (MQ=255)

                                               tgttgtTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATc                                                                                                                                 <  2:1410417/120‑1 (MQ=255)

                                               tgttgtTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGaaa                                                                                                    >  2:550556/1‑149 (MQ=255)

                                               tgttgtTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGaaa                                                                                                    >  1:133955/1‑149 (MQ=255)

                                               tgttgtTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGaaa                                                                                                    <  1:550556/149‑1 (MQ=255)

                                               tgttgtTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGaaa                                                                                                    <  1:1190892/149‑1 (MQ=255)

                                                 ttgttTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGaa                                                                                                                          <  3:340230/125‑1 (MQ=255)

                                                 ttgttTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGaa                                                                                                                          >  4:340230/1‑125 (MQ=255)

                                                 ttgttTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAata                                                                                                                        <  4:564075/127‑1 (MQ=255)

                                                   gttTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATcagcag                                                                                                                            <  4:101251/121‑1 (MQ=255)

                                                    tttGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAAt                                                                                                                                  <  2:1067872/114‑1 (MQ=255)

                                                    tttGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAAt                                                                                                                                  >  1:1067872/1‑114 (MQ=255)

                                                      tGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCgtt                                                                                                            >  3:778978/1‑134 (MQ=255)

                                                      tGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGaaa                                                                                             <  4:990230/149‑1 (MQ=255)

                                                                   gAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAag                                                                                >  3:187170/1‑149 (MQ=255)

                                                                     aaaaGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAagag                                                                              >  3:1335673/1‑149 (MQ=255)

                                                                          ggcaggcaTGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGActg                                                                                                                                         >  2:983749‑M2/1‑82 (MQ=255)

                                                                             aggcaTGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTg                                                                                                >  3:639930/1‑123 (MQ=255)

                                                                               gcaTGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCa                                                                    <  4:1335673/149‑1 (MQ=255)

                                                                                     gTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCt                                                              <  2:903590/149‑1 (MQ=255)

                                                                                      tAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTg                                                             <  2:133955/149‑1 (MQ=255)

                                                                                          cAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAat                                                                                                                         >  3:541451/1‑85 (MQ=255)

                                                                                          cAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAat                                                                                                                         >  3:655272/1‑85 (MQ=255)

                                                                                          cAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAat                                                                                                                         <  4:541451/85‑1 (MQ=255)

                                                                                            aTGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGtccttgcctggaac                                                                                                                                     >  4:1092413‑M1/1‑57 (MQ=255)

                                                                                            aTGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGaaa                                                                                             <  2:69911/111‑1 (MQ=255)

                                                                                            aTGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGaaa                                                                                             >  1:69911/1‑111 (MQ=255)

                                                                                                aaTTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGtccttgcctggaacc                                                                                                                                    >  2:1042036‑M1/1‑53 (MQ=255)

                                                                                                aaTTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGtccttgcctggaacc                                                                                                                                    <  1:1042036‑M1/68‑16 (MQ=255)

                                                                                                aaTTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAgga                                                                 <  4:706655/135‑3 (MQ=255)

                                                                                                  ttACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAAtt                                                 >  2:1093802/1‑149 (MQ=255)

                                                                                                      tGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAAtatctat                                                                                                                   >  4:837803/1‑79 (MQ=255)

                                                                                                      tGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAAtatctat                                                                                                                   <  3:837803/79‑1 (MQ=255)

                                                                                                      tGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGaaaa                                                                                       >  4:1435189/1‑107 (MQ=255)

                                                                                                      tGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGaaaa                                                                                       <  3:1435189/107‑1 (MQ=255)

                                                                                                       gaagaaTATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAAc                                                                                      >  1:770477/1‑107 (MQ=255)

                                                                                                       gaagaaTATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAAtt                                                 >  2:734621/1‑144 (MQ=255)

                                                                                                       gaagaaTATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGc                                            <  4:187170/149‑1 (MQ=255)

                                                                                                       gaagaaTATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGc                                            <  2:1347838/149‑1 (MQ=255)

                                                                                                        aagaaTATCTGCGCCAGGTGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGaa                                                                 <  2:567482/127‑1 (MQ=255)

                                                                                                        aagaaTATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAAAGAAAACGCAAAGAGAAAAAATTCAGaa                                                                 >  1:567482/1‑127 (MQ=255)

                                                                                                               tCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTc                                    >  4:1002545/1‑149 (MQ=255)

                                                                                                                 tGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTc                                                                     >  1:390008/1‑114 (MQ=255)

                                                                                                                 tGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCaa                                          >  1:463092/1‑141 (MQ=255)

                                                                                                                 tGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCaa                                          <  2:463092/141‑1 (MQ=255)

                                                                                                                  gcgcCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGtccttgcctgg                                                                                                                                        <  1:444846‑M1/46‑12 (MQ=255)

                                                                                                                  gcgcCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGtccttgcctgg                                                                                                                                        >  2:444846‑M1/1‑35 (MQ=255)

                                                                                                                             gcggcgAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGt                      <  1:1093802/149‑1 (MQ=255)

                                                                                                                                   aaTTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGaaa                                                                                                    <  4:651339/65‑1 (MQ=255)

                                                                                                                                           cTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATc                                        >  3:1447082/1‑117 (MQ=255)

                                                                                                                                           cTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATc                                        <  4:1447082/117‑1 (MQ=255)

                                                                                                                                             ggTTCCAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaatt                                                                                       >  2:1042036‑M2/1‑15 (MQ=255)

                                                                                                                                             ggTTCCAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaatt                                                                                       <  1:1042036‑M2/68‑54 (MQ=255)

                                                                                                                                              gTTCCAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgcccttttcggctgctagggcaaacaacactgattcgat                             <  4:863980‑M2/125‑112 (MQ=255)

                                                                                                                                              gTTCCAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgcccttttcggctgctagggcaaacaacactgattcgat                             >  3:863980‑M2/1‑14 (MQ=255)

                                                                                                                                              gTTCCAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcat                                                                                   <  3:1092413‑M2/71‑58 (MQ=255)

                                                                                                                                               ttCCAGtccttgcctggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgccctttttcggctgctagggcaaacaacactgattcgatgtgctcatgcttgattttcatgaa    >  3:1306770‑M1/1‑6 (MQ=255)

                                                                                                                                               ttCCAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgccctttttcggctgctagggcaaacaacactgattcgatgtgctcatgcttgattttcatgaa    <  1:1261810‑M2/149‑137 (MQ=255)

                                                                                                                                               ttCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCa                                                                    >  2:374933/1‑85 (MQ=255)

                                                                                                                                               ttCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAg                            >  2:1242765/1‑125 (MQ=255)

                                                                                                                                               ttCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGACTCTGCATCTTc    <  3:1303514/149‑1 (MQ=255)

                                                                                                                                                tCCAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgccctttttcggctgctagggcaaacaacactgattcgatgtgctcatgcttgatt            >  1:89649‑M2/1‑12 (MQ=255)

                                                                                                                                                tCCAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgccctttttcggctgctagggcaaacaacactgattcgatgtgctcatgcttgatt            <  2:89649‑M2/140‑129 (MQ=255)

                                                                                                                                                 tcaGtccttgcctggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgccctttttcggctgctagggcaaacaacactgattcgatgtgctcatgcttgattttcatgaatc  >  2:4293‑M1/2‑4 (MQ=255)

                                                                                                                                                 ccAGtccttgcctggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgccctttttcggctgctagggcaaacaacactgattc                               <  1:1386239‑M1/120‑117 (MQ=255)

                                                                                                                                                 ccAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgc                                                                                                         <  1:444846‑M2/46‑36 (MQ=255)

                                                                                                                                                 ccAGGCAAGGActggaaccaggggcaattcgccgcccccctggcgc                                                                                                         >  2:444846‑M2/1‑11 (MQ=255)

                                                                                                                                                  cAGtccttgcctggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgcc                                                                 <  1:983749‑M1/85‑83 (MQ=255)

                                                                                                                                                  cAGtccttgcctggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgcc                                                                 >  2:983749‑M1/1‑3 (MQ=255)

                                                                                                                                                  cAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGACTCTGCATCTTCGa  >  1:35682/1‑148 (MQ=255)

                                                                                                                                                  cAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGACTCTGCATCTTCGa  <  2:35682/148‑1 (MQ=255)

                                                                                                                                                   aGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgccctttttcggctgctagggcaaacaacactgattcgatgtgctcatgcttgattttca        <  1:1397496‑M2/141‑133 (MQ=255)

                                                                                                                                                   aGGCAAGGActggaaccaggggcaattcgccgcccccctggcgcagatattcttcagtaattgcattggctacccatgcctgccctttttcggctgctagggcaaacaacactgattcgatgtgctcatgcttgattttca        >  2:1397496‑M2/1‑9 (MQ=255)

                                                                                                                                                   aGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCt                          <  3:1041267/123‑1 (MQ=255)

                                                                                                                                                   aGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGt                      <  1:1104662/127‑1 (MQ=255)

AAGAGGCAAATGATTCATGAAAATCAAGCATGAGCACATCGAATCAGTGTTGTTTGCCCTAGCAGCCGAAAAAGGGCAGGCATGGGTAGCCAATGCAATTACTGAAGAATATCTGCGCCAGGGGGGCGGCGAATTGCCCCTGGTTCCAGGCAAGGACTGGAACAATCAGCAGAATATCTATCACCGTTGGTTGAAAGGTGAAACGAAAACGCAAAGAGAAAAAATTCAGAAGCTGATCCCAGCAATTCTGGCAATCCTTCCGCGCGAGCTGCGTCACCGACTCTGCATCTTCGA  >  NC_000913/1420668‑1420961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.