New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2044714 =	53 (0.380)	10 (0.080)	10/212	NT	19.3%	intergenic (+90/‑224)	asnT/yeeJ	tRNA‑Asn/putative adhesin
	?	NC_000913	2044741 =	34 (0.260)					intergenic (+117/‑197)	asnT/yeeJ	tRNA‑Asn/putative adhesin

GGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGTTATTAAT  >  NC_000913/2044566‑2044851                                                                                                                                                     |                                                                                                                                          cgaaaaaatgtaaatactgatagcaatatgattgaaaattaataacttttcgttaggcagttttgggtgtgagttgcaagaggggagactactgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaac                                                                                                                                           >  2:1448852‑M1/149‑149 (MQ=255)    aGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGcc                                                                                                                                        <  1:730776/149‑1 (MQ=255)     gAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGccc                                                                                                                                       <  3:87437/149‑1 (MQ=255)      aaCGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGccc                                                                                                                                       <  4:96982/148‑1 (MQ=255)      aaCGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGccc                                                                                                                                       >  3:96982/1‑148 (MQ=255)       aatgtaaatactgatagcaatatgattgaaaattaataacttttcgttaggcagttttgggtgtgagttgcaagaggggagactactgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTc                                                                                                                                     <  4:713377‑M1/7‑1 (MQ=255)        cggcggACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGAACTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAACCGCCCTca                                                                                                                                    <  3:1029134/149‑2 (MQ=255)            ggACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCt                                                                                                                                <  3:1307892/149‑1 (MQ=255)                 gTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATg                                                                                                                           <  3:1173323/149‑1 (MQ=255)                 gTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATg                                                                                                                           <  2:1031929/149‑1 (MQ=255)                  ttAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATgg                                                                                                                          <  2:1406430/149‑1 (MQ=255)                  ttAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATgg                                                                                                                          >  4:1067447/1‑149 (MQ=255)                  ttAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCAAccataaagg                                                                                                                          >  2:25430/1‑142 (MQ=255)                    aaTCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGtt                                                                                                                        <  1:420837/149‑1 (MQ=255)                       gcaatatgattgaaaattaataacttttcgttaggcagttttgggtgtgagttgcaagaggggagactactgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAg                                                                                                                     <  4:825130‑M1/23‑1 (MQ=255)                        cGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCAACCATAAAGGTCGAgg                                                                                                                    <  1:120014/149‑1 (MQ=38)                        cGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCAACCATAAAGGTCGAgg                                                                                                                    <  3:676340/149‑1 (MQ=38)                         aatatgattgaaaattaataacttttcgttaggcagttttgggtgtgagttgcaagaggggagactactgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAggg                                                                                                                   >  3:825130‑M1/125‑149 (MQ=255)                             gTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGtt                                                                                                                        >  3:1421357/1‑140 (MQ=255)                             gTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGtt                                                                                                                        <  4:1421357/140‑1 (MQ=255)                                    gTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCAACCATAAAGGTCGAgg                                                                                                                    <  1:1021692/137‑1 (MQ=255)                                     ttCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCAACCATAAAGGTCGAgg                                                                                                                    >  2:1098257/1‑136 (MQ=255)                                           tCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATg                                                                                                                           <  3:946889/123‑1 (MQ=255)                                           tCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATg                                                                                                                           >  4:946889/1‑123 (MQ=255)                                            aacttttcgttaggcagttttgggtgtgagttgcaagaggggagactactgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAgg                                                                                                                    >  4:1305520‑M1/106‑129 (MQ=255)                                            aacttttcgttaggcagttttgggtgtgagttgcaagaggggagactactgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAgg                                                                                                                    <  3:1305520‑M1/24‑1 (MQ=255)                                                     ggagCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAATATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTAt                                                                                                                            <  1:959246/112‑1 (MQ=255)                                                     ggagCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTAt                                                                                                                            >  2:959246/1‑112 (MQ=255)                                                              ttCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTAt                                                                                                        >  3:19382/1‑123 (MQ=255)                                                              ttCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTAt                                                                                                        <  4:19382/123‑1 (MQ=255)                                                                 tAAAAATTCGCTTTTTTAGCGCAATGTCACTGACGTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGCTTTGCTATGAACGCCATCACCATTTTCCCCTCGATta                                                                           <  1:1195547/149‑1 (MQ=255)                                                                 tAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATg                                                                                                                           <  1:108785/101‑1 (MQ=255)                                                                 tAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATg                                                                                                                           >  2:108785/1‑101 (MQ=255)                                                                            ttttttAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATaaaa                                                                      <  4:1327992/143‑1 (MQ=255)                                                                            ttttttAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATaaaa                                                                      >  3:1327992/1‑143 (MQ=255)                                                                             caagaggggagactactgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAg                                                                                                                     >  2:599975‑M1/73‑95 (MQ=255)                                                                             caagaggggagactactgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAg                                                                                                                     <  1:599975‑M1/23‑1 (MQ=255)                                                                                 tAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTAtt                                                           <  3:1067447/149‑1 (MQ=255)                                                                                          gTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGtct                                                  >  4:591327/1‑149 (MQ=255)                                                                                             tgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAgg                                                                                                                    >  2:1376877‑M1/57‑80 (MQ=255)                                                                                             tgaataactcaagttttataatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAgg                                                                                                                    <  1:1376877‑M1/24‑1 (MQ=255)                                                                                                        ttGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTAt                                                                                                        >  4:927967/1‑81 (MQ=255)                                                                                                        ttGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTAt                                                                                                        <  3:927967/81‑1 (MQ=255)                                                                                                        ttGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACtt                                                                   >  2:507117/1‑118 (MQ=255)                                                                                                        ttGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACtt                                                                   <  1:507117/118‑1 (MQ=255)                                                                                                        ttGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACt                                    >  1:1138737/1‑149 (MQ=255)                                                                                                          gAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTg                                                                                                            <  1:381992/75‑1 (MQ=255)                                                                                                          gAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTg                                                                                                            >  2:381992/1‑75 (MQ=255)                                                                                                          gAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCGTTTTCCCCTCGATTATAAAACTTGa                                                                 <  3:1441106/118‑1 (MQ=255)                                                                                                          gAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCGTTTTCCCCTCGATTATAAAACTTGa                                                                 >  4:1441106/1‑118 (MQ=255)                                                                                                              aTTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACAcc                              >  2:26476/1‑149 (MQ=255)                                                                                                               ttGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTccc                                                                                   <  3:808484/95‑1 (MQ=255)                                                                                                               ttGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTccc                                                                                   >  4:808484/1‑95 (MQ=255)                                                                                                                aatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAg                                                                                                                     >  3:1444400‑M1/38‑60 (MQ=255)                                                                                                                aatcgaggggaaaatggtgatggcgttcatagcaaaaCGCCCTCGACCTTTATGGTTGAg                                                                                                                     <  4:1444400‑M1/23‑1 (MQ=255)                                                                                                                       tAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGc                     <  1:26476/149‑1 (MQ=255)                                                                                                                       tAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGc                     <  2:1138737/149‑1 (MQ=255)                                                                                                                       tAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGc                     <  3:591327/149‑1 (MQ=255)                                                                                                                             aTAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCagta                                                      <  4:332247/110‑1 (MQ=255)                                                                                                                             aTAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCagta                                                      >  3:332247/1‑110 (MQ=255)                                                                                                                                   ggTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGt         >  3:1346862/1‑149 (MQ=255)                                                                                                                                    gTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTcccc                                                                                  >  4:1426811/1‑75 (MQ=255)                                                                                                                                    gTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTcccc                                                                                  <  3:1426811/75‑1 (MQ=255)                                                                                                                                       tttAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGttatt     <  4:1346862/149‑1 (MQ=255)                                                                                                                                          aaCATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGTTATTAAt  >  2:1153232/1‑149 (MQ=255)                                                                                                                                           aCATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAAc                >  1:1344736/1‑134 (MQ=255)                                                                                                                                           aCATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAAc                <  2:1344736/134‑1 (MQ=255)                                                                                                                                               cTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGaaaa           >  1:1137560/1‑135 (MQ=255)                                                                                                                                               cTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGaaaa           <  2:1137560/135‑1 (MQ=255)                                                                                                                                                   aaCGCCCTCAACCATAAAGGTCGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTAtt                                                           >  4:908834‑M1/3‑83 (MQ=255)                                                                                                                                                   aaCGCCCTCAACCATAAAGGTCGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTAtt                                                           <  3:908834‑M1/81‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                          GGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCAAATTCTAAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTATAAAACTTGAGTTATTCAGTAGTCTCCCCTCTTGCAACTCACACCCAAAACTGCCTAACGAAAAGTTATTAAT  >  NC_000913/2044566‑2044851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.