New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2336716 =	75 (0.540)	6 (0.050)	5/216	NT	8.2%	intergenic (‑72/+77)	yfaA/gyrA	DUF2138 family protein, putative host defense protein/DNA gyrase (type II topoisomerase), subunit A
	?	NC_000913	2336746 =	62 (0.470)					intergenic (‑102/+47)	yfaA/gyrA	DUF2138 family protein, putative host defense protein/DNA gyrase (type II topoisomerase), subunit A

CGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCACTTCCGGAGCGATTTCATCGTCCCCTTCCGCGGCACTG  >  NC_000913/2336569‑2336862                                                                                                                                                     |                                                                                                                                                   gtgacgaggaagatctggataccatcgacggcagtgccgcggaaggggacgatgaaatcgctccggaagtggacgttgacgacgagccagaagaagaataattttacttcttcatgccaaaagggagctatctcccttgtttgaattga                                                                                                                                                    >  1:1418666‑M1/149‑149 (MQ=255)  tgacgaggaagatctggataccatcgacggcagtgccgcggaaggggacgatgaaatcgctccggaagtggacgttgacgacgagccagaagaagaataattttacttcttcatgccaaaagggagctatctcccttgtttgaattgaa                                                                                                                                                   >  3:47820‑M1/148‑149 (MQ=255)  ggAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACaaa                                                                                                                                                  <  1:361100/149‑1 (MQ=255)   gAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACaaaa                                                                                                                                                 >  3:363803/1‑149 (MQ=255)   gAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACaaaa                                                                                                                                                 <  4:1182414/149‑1 (MQ=255)       gCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGccc                                                                                                                                             <  2:300428/149‑1 (MQ=255)       gCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGccc                                                                                                                                             <  1:767849/149‑1 (MQ=255)              tATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACttt                                                                                                                                      >  2:198819/1‑149 (MQ=255)              tATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTCGTGTATAGCCAGCCATTTTTTCCGGGCACGGCCAAACTTTACCGTGCCTTAATACGACAAAAGCCCAGCCttt                                                                                                                                      >  2:184723/1‑149 (MQ=255)                     gcAAAAACTTCAAGACCCTAGGACCGCCAACCCTTCGGCCTTTTTTTCCCCCCCCTTTGCAAC‑TTCCCTTTTTTTAGCCCGCCGTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCt                                                                                                                               <  1:184723/148‑1 (MQ=255)                      cAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTg                                                                                                                              <  4:363803/149‑1 (MQ=255)                            cTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTg                                                                                                                                     >  1:1437386/1‑136 (MQ=255)                            cTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTg                                                                                                                                     <  2:1437386/136‑1 (MQ=255)                            cTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACttt                                                                                                                        >  4:383847/1‑149 (MQ=255)                             tACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACtttt                                                                                                                       >  4:845796/1‑149 (MQ=255)                                aaGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTg                                                                                                                              >  1:903628/1‑139 (MQ=255)                                aaGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTg                                                                                                                              <  2:903628/139‑1 (MQ=255)                                aaGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaa                                                                                                                    <  1:198819/149‑1 (MQ=255)                                     cATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACttt                                                                                                                                      >  3:563520/1‑126 (MQ=255)                                     cATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACttt                                                                                                                                      <  4:563520/126‑1 (MQ=255)                                     cATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaattcaa                                                                                                               >  1:1142875/1‑149 (MQ=255)                                      aTAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCaaa                                                                                                              <  3:845796/149‑1 (MQ=255)                                       tAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAAc                                                                                                             >  3:80847/1‑149 (MQ=255)                                          aaCCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAg                                                                                                          >  1:123136/1‑149 (MQ=255)                                              gCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGgag                                                                                                      >  4:1261585/1‑149 (MQ=255)                                              gCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGgag                                                                                                      <  2:1142875/149‑1 (MQ=255)                                                cAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGAt                                                                                                    <  4:80847/149‑1 (MQ=255)                                                   gatgaaatcgctccggaagtggacgttgacgacgagccagaagaagaataattttacttcttcatgccaaaagggagctatctcccttgtttgaattgaaa                                                                                                                                                  <  4:1224610‑M1/3‑1 (MQ=255)                                                   gatgaaatcgctccagaagtggacgttgacgacgagccagaagaagaataattttacttcttcatgccagaagggagctatctcccttgtttgaattgaaa                                                                                                                                                  >  3:1224610‑M1/99‑101 (MQ=255)                                                    cTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCt                                                                                                <  3:1261585/149‑1 (MQ=255)                                                      ttC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTcc                                                                                              <  2:123136/149‑1 (MQ=255)                                                          gCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCtt                                                                                           >  3:150591/1‑149 (MQ=255)                                                             tttttttCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTg                                                                                        >  3:21614/1‑149 (MQ=255)                                                                    caccacTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATgaa                                                                                 <  4:150591/149‑1 (MQ=255)                                                                      ccacTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCt                                                                                                                               <  3:1458268/101‑1 (MQ=255)                                                                      ccacTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCt                                                                                                                               >  4:1458268/1‑101 (MQ=255)                                                                        acTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTcc                                                                                              <  3:1130904/132‑1 (MQ=255)                                                                        acTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTcc                                                                                              >  4:1130904/1‑132 (MQ=255)                                                                         cTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACtttt                                                                                                                       >  2:485632/1‑106 (MQ=255)                                                                         cTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACtttt                                                                                                                       <  1:485632/106‑1 (MQ=255)                                                                          tCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAggg                                                                                                        <  1:1099767/120‑1 (MQ=255)                                                                          tCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAggg                                                                                                        >  2:1099767/1‑120 (MQ=255)                                                                              gacgacgagccagaagaagaataattttacttcttcatgccaaaagggagctatctcccttgtttgaattgAAAAGCCCAGACTTTGCAGCCTGGAc                                                                                                                           >  1:1335353‑M1/72‑97 (MQ=255)                                                                              gacgacgagccagaagaagaataattttacttcttcatgccaaaagggagctatctcccttgtttgaattgAAAAGCCCAGACTTTGCAGCCTGGAc                                                                                                                           <  2:1335353‑M1/26‑1 (MQ=255)                                                                               gCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg                                                                                                         <  4:820533/114‑1 (MQ=255)                                                                               gCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg                                                                                                         >  4:436039/1‑114 (MQ=255)                                                                               gCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg                                                                                                         >  3:820533/1‑114 (MQ=255)                                                                               gCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg                                                                                                         <  3:436039/114‑1 (MQ=255)                                                                                ccACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg                                                                                                         <  2:1062386/113‑1 (MQ=255)                                                                                ccACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg                                                                                                         >  1:1062386/1‑113 (MQ=255)                                                                                 cacaTTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAattat                                                                    <  3:383847/149‑1 (MQ=255)                                                                                  acaTTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAattatt                                                                   <  4:82421/149‑1 (MQ=255)                                                                                  acaTTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAattatt                                                                   >  3:82421/1‑149 (MQ=255)                                                                                        cTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACtt                                                                                                                         <  4:1386957/89‑1 (MQ=255)                                                                                        cTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACtt                                                                                                                         >  3:1386957/1‑89 (MQ=255)                                                                                         ttGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaa                                                                                                                    <  3:1178352/93‑1 (MQ=255)                                                                                         ttGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttcaa                                                                                                                    >  4:1178352/1‑93 (MQ=255)                                                                                             gtATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg                                                                                                         <  1:1460250/100‑1 (MQ=255)                                                                                             gtATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAgg                                                                                                         >  2:1460250/1‑100 (MQ=255)                                                                                              tataGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCt                                                       >  1:791189/1‑149 (MQ=255)                                                                                               ataGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGt                                                                            >  4:1340104/1‑127 (MQ=255)                                                                                               ataGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGt                                                                            <  3:1340104/127‑1 (MQ=255)                                                                                                 agccagccA‑TTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAattat                                                                    >  4:1353107/1‑132 (MQ=255)                                                                                                 agccagccA‑TTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAattat                                                                    <  3:1353107/132‑1 (MQ=255)                                                                                                 aataattttacttcttcatgccaaaagggagctatctcccttgtttgaattgAAAAGCCCAGACTTTGCAGCCTGGAc                                                                                                                           <  3:1362665‑M1/26‑1 (MQ=255)                                                                                                 aataattttacttcttcatgccaaaagggagctatctcccttgtttgaattgAAAAGCCCAGACTTTGCAGCCTGGAc                                                                                                                           >  4:1362665‑M1/53‑78 (MQ=255)                                                                                                  gccagccaTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTgg                                                                                       <  3:1149867/113‑1 (MQ=255)                                                                                                  gccagccaTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTgg                                                                                       >  4:1149867/1‑113 (MQ=255)                                                                                                     agccaTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCgtcgtc                                                >  3:689835/1‑149 (MQ=255)                                                                                                       ccaTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCaa                                              >  1:829669/1‑149 (MQ=255)                                                                                                        caTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTg                                                                                        <  2:165130/106‑1 (MQ=255)                                                                                                        caTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTg                                                                                        >  1:165130/1‑106 (MQ=255)                                                                                                        caTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAAc                                             >  3:1241122/1‑149 (MQ=255)                                                                                                         aTTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTAGTCAACg                                            <  2:791189/149‑1 (MQ=255)                                                                                                            ttttACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTcc                                         <  4:689835/149‑1 (MQ=255)                                                                                                             tttACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCa                                        <  2:829669/149‑1 (MQ=255)                                                                                                               ttcatgccaaaagggagctatctcccttgtttgaattgAAAAGCCCAGACTTTGCAGCCTGGACtttt                                                                                                                       <  1:989068‑M1/30‑1 (MQ=255)                                                                                                               ttcatgccaaaagggagctatctcccttgtttgaattgAAAAGCCCAGACTTTGCAGCCTGGACtttt                                                                                                                       >  2:989068‑M1/39‑68 (MQ=255)                                                                                                                  gggCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttca                                                                                                                     <  1:679899/67‑1 (MQ=255)                                                                                                                  gggCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTttca                                                                                                                     >  2:679899/1‑67 (MQ=255)                                                                                                                         gCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGAc                                                                                                                                         <  3:415220/40‑1 (MQ=255)                                                                                                                         gCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGAc                                                                                                                                         >  4:415220/1‑40 (MQ=255)                                                                                                                                tttACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCACTTCCGGAGCGATTTc                        >  2:22428/1‑146 (MQ=255)                                                                                                                                tttACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCACTTCCGGAGCGATTTc                        <  1:22428/146‑1 (MQ=255)                                                                                                                                   aCCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCACTTCCGGAGCGATTTCATCGTc                  <  4:21614/149‑1 (MQ=255)                                                                                                                                    ccGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATa                                                                                                   <  4:205521/67‑1 (MQ=255)                                                                                                                                    ccGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATa                                                                                                   >  3:205521/1‑67 (MQ=255)                                                                                                                                          ccTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCACTTCCGGAGCGATTTCATCGTCCCCTTcc           >  3:1287361/1‑149 (MQ=255)                                                                                                                                                  gACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCt                                                                                                <  1:118904/56‑1 (MQ=255)                                                                                                                                                  gACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCt                                                                                                >  2:118904/1‑56 (MQ=255)                                                                                                                                                  gACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTgg                                                         >  4:404617/1‑95 (MQ=255)                                                                                                                                                  gACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTgg                                                         <  3:404617/95‑1 (MQ=255)                                                                                                                                                  gACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCAc                                       >  4:1432651/1‑113 (MQ=255)                                                                                                                                                  gACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCAc                                       <  3:1432651/113‑1 (MQ=255)                                                                                                                                                   aCAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCACTTCCGGAGCGATTTCATCGTCCCCTTCCGCGGCACTg  <  4:1287361/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CGGAAAGCAGTGCTATTGCGCCAAAACCTACAAGACCATAGAACCGCCAGCCTTTC‑GCCTTTTTTTCACCACTCATTGCCACATTCCTTGTGTATAGCCAGCCATTTTTTACGGGCACAGCCAAACTTTACCGTGCCCTAATACGACAAAAGCCCAGACTTTGCAGCCTGGACTTTTCAATTCAAACAAGGGAGATAGCTCCCTTTTGGCATGAAGAAGTAAAATTATTCTTCTTCTGGCTCGTCGTCAACGTCCACTTCCGGAGCGATTTCATCGTCCCCTTCCGCGGCACTG  >  NC_000913/2336569‑2336862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.