| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2775217 | 97 (0.700) | 5 (0.040) | 4/214 | NT | 5.0% | intergenic (+196/‑328) | yfjW/ypjI | CP4‑57 prophage; putative inner membrane protein/pseudogene, CP4‑57 putative prophage remnant;Phage or Prophage Related |
| ? | NC_000913 | = 2775223 | 97 (0.740) | intergenic (+202/‑322) | yfjW/ypjI | CP4‑57 prophage; putative inner membrane protein/pseudogene, CP4‑57 putative prophage remnant;Phage or Prophage Related | |||||
Only 100 of 123 total aligned reads displayed.
TCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTTGTGAATAGCTACTGTAAATGCCC > NC_000913/2775069‑2775365 | tttgtaggggcatttacagtagctattcacaactaaatgttagatacaagagaagggatgggatagacagaacctttcagtacgaaagccggttacggcaccatttgcctacagtactccattcaacagctgctggcgcttccATGCCg < 2:441487‑M1/6‑1 (MQ=255) aaGCCTGCTTTAAAAACAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGcgg < 3:735979‑M2/149‑4 (MQ=255) tttAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGctggctcggcatatttct < 4:719362‑M1/149‑19 (MQ=255) ttaaaaaCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAgc < 4:735979/146‑1 (MQ=255) aGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCcag > 3:618624/1‑149 (MQ=255) gTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATg > 2:1328636/1‑149 (MQ=255) gAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGcc < 2:130143/132‑1 (MQ=255) gAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGcc > 1:130143/1‑132 (MQ=255) gCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAAt > 3:1136879/1‑143 (MQ=255) gCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAAt < 2:1269454/143‑1 (MQ=255) gCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAAt > 1:1269454/1‑143 (MQ=255) gCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAAt < 4:1136879/143‑1 (MQ=255) ggACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACt < 1:1328636/149‑1 (MQ=255) tCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACt > 1:1334677/1‑143 (MQ=255) tCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACt < 2:1334677/143‑1 (MQ=255) aTACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAGGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGtg < 2:1238455/129‑2 (MQ=255) aTACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGtt > 1:1238455/1‑129 (MQ=255) aCCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAAt < 2:971769/149‑1 (MQ=255) aCCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAAt > 2:1458120/1‑149 (MQ=255) tttAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGc > 3:1068146/1‑93 (MQ=255) tttAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGc < 4:1068146/93‑1 (MQ=255) atagacagaacctttcagtacgaaagccggttacggcaccatttgcctacagtactccattcaacagctgctggcgcttccATGCCGAGCCAGCGGCATg < 2:755052‑M1/19‑1 (MQ=255) atagacagaacctttcagtacgaaagccggttacggcaccatttgcctacagtactccattcaacagctgctggcgcttccATGCCGAGCCAGCGGCATg > 1:755052‑M1/82‑100 (MQ=255) tGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAAt < 1:1026494/118‑1 (MQ=255) tGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAAt > 2:1026494/1‑118 (MQ=255) gTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTg < 2:495164/123‑1 (MQ=255) gTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTg > 1:495164/1‑123 (MQ=255) tttttGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGa < 1:899082/116‑1 (MQ=255) tttttGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGa > 2:899082/1‑116 (MQ=255) tCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGtt < 1:172177/103‑1 (MQ=255) tCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGtt > 2:172177/1‑103 (MQ=255) gTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGctggctcggcatatttct > 3:664453‑M1/1‑70 (MQ=255) gTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGctggctcggcatatttct < 4:664453‑M1/88‑19 (MQ=255) cccATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAAt > 1:696983/1‑119 (MQ=255) cccATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAAt < 2:696983/119‑1 (MQ=255) aTACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGtt > 3:386961/1‑148 (MQ=255) aTACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTc < 3:1342075/149‑1 (MQ=255) cTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGc < 3:719032/108‑1 (MQ=255) tataTTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCt > 1:1185429/1‑149 (MQ=255) atatTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAAt < 3:451102/92‑1 (MQ=255) atatTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAAt > 4:451102/1‑92 (MQ=255) tatTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGctggctcggcatat > 2:1287121‑M1/1‑56 (MQ=255) tatTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGctggctcggcatat < 1:1287121‑M1/70‑15 (MQ=255) ttttCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGa < 1:414460/92‑1 (MQ=255) ggcaccatttgcctacagtactccattcaacagctgctggcgcttccATGCCGAGCCAGCGGCATgg > 4:259264‑M1/48‑67 (MQ=255) ggcaccatttgcctacagtactccattcaacagctgctggcgcttccATGCCGAGCCAGCGGCATgg < 3:259264‑M1/20‑1 (MQ=255) ttCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTatccca > 3:1330851/1‑149 (MQ=255) tgttgtTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTc > 1:190164/1‑121 (MQ=255) tgttgtTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTc < 2:190164/121‑1 (MQ=255) ttgttTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGa > 4:5058/1‑85 (MQ=255) ttgcctacagtactccattcaacagctgctggcgcttccATGCCGAGCCAGCGGCATGGa < 3:329847‑M1/21‑1 (MQ=255) ttgcctacagtactccattcaacagctgctggcgcttccATGCCGAGCCAGCGGCATGGa > 4:329847‑M1/40‑60 (MQ=255) gttTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACt < 2:79270/122‑1 (MQ=255) gttTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACt > 1:79270/1‑122 (MQ=255) tttAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATg < 4:658474/80‑1 (MQ=255) tttAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGa > 1:1025690/1‑82 (MQ=255) tttAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGa < 2:1025690/82‑1 (MQ=255) tttAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTa < 2:253400/85‑1 (MQ=255) tttAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTa > 1:253400/1‑85 (MQ=255) tttAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTc < 1:645118/130‑1 (MQ=255) tttAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTtct < 2:415375/149‑1 (MQ=255) tAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACt > 4:705860/1‑119 (MQ=255) tAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACt < 3:705860/119‑1 (MQ=255) aaCTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTc > 4:193949/1‑113 (MQ=255) aaCTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTc < 3:193949/113‑1 (MQ=255) gCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTAt < 4:1330851/149‑1 (MQ=255) aGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTAc > 2:132538/1‑110 (MQ=255) aGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTAc < 1:132538/110‑1 (MQ=255) gAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTaa < 3:960468/149‑1 (MQ=255) tGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCt > 4:59724/1‑116 (MQ=255) tGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCt < 3:59724/116‑1 (MQ=255) aGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGa > 4:600260/1‑65 (MQ=255) aGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGa < 3:600260/65‑1 (MQ=255) aGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTa < 2:670506/149‑1 (MQ=255) cGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTat < 1:1162273/118‑1 (MQ=255) cGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTat > 2:1162273/1‑118 (MQ=255) gTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTtctc > 2:1410598/1‑129 (MQ=255) gTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTtctc < 1:1410598/129‑1 (MQ=255) gTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTtctc > 4:1646/1‑129 (MQ=255) gTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTtg > 2:1411779/1‑149 (MQ=255) gAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTtctc > 1:1445307/1‑126 (MQ=255) gAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTaa > 2:966770/1‑136 (MQ=255) aaaGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTtgt < 3:61461/145‑1 (MQ=255) aaaGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTtgt > 4:61461/1‑145 (MQ=255) gCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTTGTGAATAGc > 3:813298/1‑149 (MQ=255) ccAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTc < 1:90497/86‑1 (MQ=255) cAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTTGTGAATAg < 4:1259170/146‑1 (MQ=255) cAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTTGTGAATAg > 3:1259170/1‑146 (MQ=255) aGAAATATGCCGAGCCAGcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaacgacaaaaacgccactttaaagcaggtatgagtgtccgcttcacgctcaagcctgctttaaa < 4:719362‑M2/149‑132 (MQ=255) aGAAATATGCCGAGCCAGcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaac > 3:664453‑M2/1‑18 (MQ=255) aGAAATATGCCGAGCCAGcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaatataggtatgggtaac < 4:664453‑M2/88‑71 (MQ=255) atatGCCGAGCCAGcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaata < 1:1287121‑M2/70‑57 (MQ=255) atatGCCGAGCCAGcggcatatttctggcttttcaaccgctcagttctggcagttaaacaacagaaaata > 2:1287121‑M2/1‑14 (MQ=255) atatGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACa < 2:534770/126‑1 (MQ=255) atatGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACa > 1:534770/1‑126 (MQ=255) TGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTTGTGAATAGCTACTGTAAAt > 4:813298‑M1/1‑149 (MQ=255) GCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTa < 4:1023197‑M1/96‑1 (MQ=255) GCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTa > 3:1023197‑M1/1‑96 (MQ=255) CGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTTGTGAATAGCTACTGTAAATGcc < 4:1189836‑M1/149‑1 (MQ=255) GAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTTGTGAATAGCTACTGTAAATGccc < 1:441487‑M1/149‑1 (MQ=255) | TCCTAAGTTAAGCCTGTTTTTAAAGCAGGCTTGAGCGTGAAGCGGACACTCATACCTGCTTTAAAGTGGCGTTTTTGTCGTTACCCATACCTATATTTTCTGTTGTTTAACTGCCAGAACTGAGCGGTTGAAAAGCCAGAAATATGCCGAGCCAGCGGCATGGAAGCGCCAGCAGCTGTTGAATGGAGTACTGTAGGCAAATGGTGCCGTAACCGGCTTTCGTACTGAAAGGTTCTGTCTATCCCATCCCTTCTCTTGTATCTAACATTTAGTTGTGAATAGCTACTGTAAATGCCC > NC_000913/2775069‑2775365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |