New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2818349 =62 (0.450)6 (0.050) 6/210 NT 8.5% intergenic (‑75/+124) argY/argV tRNA‑Arg/tRNA‑Arg
?NC_000913 2818411 = 72 (0.560)intergenic (‑137/+62) argY/argV tRNA‑Arg/tRNA‑Arg

GCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGA  >  NC_000913/2818202‑2818486
                                                                                                                                                   |                                                                                                                                         
gCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCgg                                                                                                                                          <  4:291691/149‑1 (MQ=255)
cgcgatttgcatccgtagctcagctggttagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccagg                                                                                                                                          >  4:1264964‑M1/148‑149 (MQ=255)
   tCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGggag                                                                                                                                       <  4:10760/149‑1 (MQ=255)
   catttgcatccgtagctcagctggatagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGggag                                                                                                                                       >  2:269249‑M1/145‑149 (MQ=255)
   catttgcatccgtagctcagctggatagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGggag                                                                                                                                       >  2:914730‑M1/145‑149 (MQ=255)
      gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGAt                                                                                                                                    <  3:285569/149‑1 (MQ=255)
      gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGAt                                                                                                                                    <  1:161791/149‑1 (MQ=255)
             ttCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCg                                                                                                                                           >  2:1407530/1‑135 (MQ=255)
             ttCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCg                                                                                                                                           <  1:1407530/135‑1 (MQ=255)
               tagctcagctggatagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccag                                                                                                                                           <  2:1399946‑M1/1‑1 (MQ=255)
               tagctcagctggatagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccag                                                                                                                                           >  1:1399946‑M1/133‑133 (MQ=255)
                 aaCCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGgga                                                                                                                                        >  2:660755/1‑134 (MQ=255)
                 aaCCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGgga                                                                                                                                        <  1:660755/134‑1 (MQ=255)
                       cGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTc                                                                                                                   >  2:1021345/1‑149 (MQ=255)
                         ggatagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGggag                                                                                                                                       <  4:780602‑M1/5‑1 (MQ=255)
                         ggatagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGggag                                                                                                                                       >  3:780602‑M1/123‑127 (MQ=255)
                          gatagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGggag                                                                                                                                       <  4:918063‑M1/5‑1 (MQ=255)
                          gatagagtactcggctacgaaccgagcggtcggaggttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGggag                                                                                                                                       >  3:918063‑M1/122‑126 (MQ=255)
                           cGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGccc                                                                                                               <  2:612388/149‑1 (MQ=255)
                                           gAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTg                                                                                                   >  1:469391/1‑145 (MQ=255)
                                           gAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTg                                                                                                   <  2:469391/145‑1 (MQ=255)
                                             gTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAg                                                                                             <  1:1021345/149‑1 (MQ=255)
                                                    aTCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTc                                                                                                                               >  1:426876/1‑108 (MQ=255)
                                                    aTCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTc                                                                                                                               <  2:426876/108‑1 (MQ=255)
                                                     tCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTa                                                                                     <  1:985141/149‑1 (MQ=255)
                                                     tCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTa                                                                                     >  1:50622/1‑149 (MQ=255)
                                                      ccAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTAt                                                                                    <  2:50622/149‑1 (MQ=255)
                                                       cAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTAtc                                                                                   >  4:810601/1‑149 (MQ=255)
                                                        aGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAAc                                                                                         >  3:668098/1‑142 (MQ=255)
                                                        aGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAAc                                                                                         <  4:668098/142‑1 (MQ=255)
                                                         gCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGt                                                                                                     >  4:876736/1‑129 (MQ=255)
                                                         gCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGt                                                                                                     <  3:876736/129‑1 (MQ=255)
                                                            gAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTccc                                                                              <  3:810601/149‑1 (MQ=255)
                                                             gttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGggag                                                                                                                                       <  1:794876‑M1/5‑1 (MQ=255)
                                                             gttcgaatcctcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaacaGggag                                                                                                                                       >  2:794876‑M1/87‑91 (MQ=255)
                                                                 aCGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCg                                                                                                           <  1:971665/115‑1 (MQ=255)
                                                                 aCGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCg                                                                                                           >  2:971665/1‑115 (MQ=255)
                                                                    gATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGggag                                                                                                                                       >  4:399396/1‑84 (MQ=255)
                                                                    gATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGggag                                                                                                                                       <  3:399396/84‑1 (MQ=255)
                                                                    gATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTa                                                                                     >  1:1177361/1‑134 (MQ=255)
                                                                    gATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTa                                                                                     <  2:1177361/134‑1 (MQ=255)
                                                                       tcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGc                                                                    <  3:645794‑M1/72‑1 (MQ=255)
                                                                       tcccggatgcaccatattctacgtactttcagcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGc                                                                    >  4:645794‑M1/77‑148 (MQ=255)
                                                                         aTCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGt                                                                 >  2:549153/1‑149 (MQ=255)
                                                                            gggAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGc                                                                                                                        <  2:274713/91‑1 (MQ=255)
                                                                            gggAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGc                                                                                                                        >  1:274713/1‑91 (MQ=255)
                                                                            gggAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGttat                                                              >  4:218098/1‑149 (MQ=255)
                                                                             ggAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCg                                                                                                                       >  4:566147/1‑91 (MQ=255)
                                                                             ggAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCg                                                                                                                       <  3:566147/91‑1 (MQ=255)
                                                                             ggAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGttatt                                                             >  4:929900/1‑149 (MQ=255)
                                                                                    tactttactGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCa                                                      >  3:1409499/1‑149 (MQ=255)
                                                                                       tttactGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACct                                                   >  2:564042/1‑149 (MQ=255)
                                                                                       tttactGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACct                                                   >  2:687018/1‑149 (MQ=255)
                                                                                         tactGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGTTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACctct                                                 >  4:671853/1‑149 (MQ=255)
                                                                                          actGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCtt                                                <  1:549153/149‑1 (MQ=255)
                                                                                           ctGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTc                                               <  3:671853/149‑1 (MQ=255)
                                                                                             gCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGtt                                                                                                    <  2:475443/94‑1 (MQ=255)
                                                                                             gCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGtt                                                                                                    >  1:475443/1‑94 (MQ=255)
                                                                                              cAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCAt                                            <  1:564042/149‑1 (MQ=255)
                                                                                                      gcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTccc                                                                              >  2:1202924‑M1/46‑107 (MQ=255)
                                                                                                      gcgatgaaggtatggaagaggtggcggtaataaccgcaggcaccaGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTccc                                                                              <  1:1202924‑M1/62‑1 (MQ=255)
                                                                                                       tGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATAc                                          <  4:728413/142‑1 (MQ=255)
                                                                                                       tGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATAc                                          >  3:728413/1‑142 (MQ=255)
                                                                                                       tGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATc                                   <  1:687018/149‑1 (MQ=255)
                                                                                                       tGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATc                                   <  4:1409499/149‑1 (MQ=255)
                                                                                                         aTACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGc                                 <  3:929900/149‑1 (MQ=255)
                                                                                                           aCCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGt                                                                          >  2:929382/1‑106 (MQ=255)
                                                                                                           aCCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGt                                                                          <  1:929382/106‑1 (MQ=255)
                                                                                                             aggtatggaagaggtggcggtaataaccgcaggcacccGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGt                                                                          <  3:1209088‑M1/66‑1 (MQ=255)
                                                                                                             aggtatggaagaggtggcggtaataaccgcaggcacccGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGt                                                                          >  4:1209088‑M1/39‑104 (MQ=255)
                                                                                                                tactaAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAAc                                                                                         >  1:45611/1‑86 (MQ=38)
                                                                                                                tactaAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAAc                                                                                         <  2:45611/86‑1 (MQ=38)
                                                                                                                   taAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTa                                                                                     >  4:276195/1‑87 (MQ=39)
                                                                                                                   taAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTa                                                                                     <  3:276195/87‑1 (MQ=39)
                                                                                                                   taAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACg                       >  4:1469955/1‑149 (MQ=255)
                                                                                                                    aaaGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCt                                                                                                 >  1:729914/1‑74 (MQ=40)
                                                                                                                    aaaGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCt                                                                                                 <  2:729914/74‑1 (MQ=40)
                                                                                                                    aaaGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTc                                               <  4:113571/124‑1 (MQ=255)
                                                                                                                    aaaGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTc                                               >  3:113571/1‑124 (MQ=255)
                                                                                                                           tATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCGCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAatat               >  2:1261499/1‑149 (MQ=255)
                                                                                                                           caTCAAGTAAGAGATAGGGCATCCGGGAGGGTTACACGCCTTGCGGCTCGCCCTTCGGCCCGTTGCTAAGGCAACGTTATCCTCCCTTGTGCCTGCGGTTATTACCGCCACCTCTTCCACACATTCATCGCTGAAAGTACGTAGAataa               >  4:906550/2‑148 (MQ=17)
                                                                                                                            aTCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCGCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATg              <  1:1261499/149‑1 (MQ=255)
                                                                                                                             tCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATgg             <  3:218098/149‑1 (MQ=255)
                                                                                                                                  tAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCAt        >  3:701431/1‑149 (MQ=255)
                                                                                                                                        aTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGgga  <  4:701431/149‑1 (MQ=255)
                                                                                                                                         tGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATa                                           <  2:823753/107‑1 (MQ=255)
                                                                                                                                         tGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATa                                           >  1:823753/1‑107 (MQ=255)
                                                                                                                                              cATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATg              <  3:921519/131‑1 (MQ=255)
                                                                                                                                              cATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATg              >  4:921519/1‑131 (MQ=255)
                                                                                                                                               aTCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCa                                             <  4:744596/99‑1 (MQ=255)
                                                                                                                                               aTCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCa                                             >  3:744596/1‑99 (MQ=255)
                                                                                                                                                   |                                                                                                                                         
GCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCGGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAAAGTACGTAGAATATGGTGCATCCGGGA  >  NC_000913/2818202‑2818486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.