BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3727884 =	166 (1.200)	21 (0.160)	16/210	NT	11.3%	intergenic (‑136/+33)	yiaB/xylB	YiaAB family inner membrane protein/xylulokinase
*	?	NC_000913	3727914 =	175 (1.370)	21 (0.160)	16/210	NT	11.3%	intergenic (‑166/+3)	yiaB/xylB	YiaAB family inner membrane protein/xylulokinase

Only 100 of 261 total aligned reads displayed.

TGAGGTTTTCATAACGATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCG  >  NC_000913/3727737‑3728032

ccagagaaatcgctcattgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgtt                                                                                                                                                     <  3:190505‑M1/2‑1 (MQ=255)

 gAGGTTTTCATAACGATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTa                                                                                                                                                    <  1:1282537/149‑1 (MQ=255)

 cagagaaatcgctcattgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTa                                                                                                                                                    <  4:763935‑M1/3‑1 (MQ=255)

  agagaaatcgctcattgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTAt                                                                                                                                                   <  2:781605‑M1/4‑1 (MQ=255)

   gagaaatcgctcattgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATc                                                                                                                                                  <  2:88864‑M1/5‑1 (MQ=255)

   gagaaatcgctcattgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATc                                                                                                                                                  <  3:886252‑M1/5‑1 (MQ=255)

    gTTTTCATAACGATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATcc                                                                                                                                                 <  4:614704/149‑1 (MQ=255)

    agaaatcgctcattgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATcc                                                                                                                                                 <  1:702425‑M1/6‑1 (MQ=255)

        tCATAACGATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCa                                                                                                                                             <  4:1313649/149‑1 (MQ=255)

           gctcattgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTa                                                                                                                                                    >  3:1012908‑M1/137‑139 (MQ=255)

           gctcattgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTa                                                                                                                                                    <  4:1012908‑M1/3‑1 (MQ=255)

               gATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTc                                                                                                                                      >  2:1131349/1‑149 (MQ=255)

               attgaattgttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATc                                                                                                                                                  <  2:398999‑M1/5‑1 (MQ=255)

                       tatCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAggg                                                                                                                              <  3:1057596/149‑1 (MQ=255)

                        ttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTCAGGCAgggg                                                                                                                             <  1:258424‑M1/26‑1 (MQ=255)

                        ttgccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTCAGGCAgggg                                                                                                                             >  3:770741‑M1/124‑149 (MQ=255)

                          gccgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTCAGGCAGGGGAt                                                                                                                           >  1:1190017‑M1/122‑149 (MQ=255)

                            cgcaactaccgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTCAGGCAGGGGATaa                                                                                                                         >  2:258424‑M1/120‑149 (MQ=255)

                             ccAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTcaggcagg                                                                                                                               >  3:581363/1‑142 (MQ=255)

                               aGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCAcc                                                                                                                                           <  3:66516/128‑1 (MQ=255)

                               aGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCAcc                                                                                                                                           >  4:66516/1‑128 (MQ=255)

                                   accgttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATccc                                                                                                                                                <  2:832156‑M1/7‑1 (MQ=255)

                                       ttagaacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgtt                                                                                                                                                     <  1:387643‑M1/2‑1 (MQ=255)

                                       aTTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATcc                                                                                                                                                 >  4:1316906/1‑114 (MQ=255)

                                        ttACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCAt                                                                                                             >  2:1218392/1‑149 (MQ=255)

                                           aacagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgt                                                                                                                                                      <  3:520680‑M1/1‑1 (MQ=255)

                                            gAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATc                                                                                                                                                  <  3:1227846/108‑1 (MQ=255)

                                            gAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGtt                                                                                                                     >  4:1251884/1‑137 (MQ=255)

                                             cagtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATcccc                                                                                                                                               <  1:1138561‑M1/8‑1 (MQ=255)

                                              agtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTCAGGCAgggg                                                                                                                             <  1:1454817‑M1/26‑1 (MQ=255)

                                              agtcgcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTCAGGCAgggg                                                                                                                             >  2:1454817‑M1/102‑127 (MQ=255)

                                                aaCCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTcaggcag                                                                                                                                <  3:28275/122‑1 (MQ=255)

                                                  gcatctaccagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTcaggcagg                                                                                                                               >  1:449739‑M1/98‑121 (MQ=255)

                                                    aaCGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAg                                                                                                 <  3:267198/149‑1 (MQ=255)

                                                     aCGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGt                                                                                                >  2:1038330/1‑149 (MQ=255)

                                                       gAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTcagg                                                                                                                                   >  2:876848/1‑112 (MQ=255)

                                                       gAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTcagg                                                                                                                                   <  3:472633/112‑1 (MQ=255)

                                                       gAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTcagg                                                                                                                                   >  4:472633/1‑112 (MQ=255)

                                                        accagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTCAGGCAGGGGATAACGtt                                                                                                                     >  3:381856‑M1/92‑125 (MQ=255)

                                                        accagatgcgcagcgttatgccgcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTCAGGCAGGGGATAACGtt                                                                                                                     <  4:381856‑M1/34‑1 (MQ=255)

                                                        aaaGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGc                                                                                             <  3:506850/149‑1 (MQ=255)

                                                        aaaGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGc                                                                                             <  4:5125/149‑1 (MQ=255)

                                                         aaGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCt                                                                                            <  4:1070303/149‑1 (MQ=255)

                                                              aaaaCTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCt                                                                                            >  4:1409907/1‑144 (MQ=255)

                                                              aaaaCTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATag                                                                                       >  3:143096/1‑149 (MQ=255)

                                                              aaaaCTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATGCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATag                                                                                       <  1:1218392/149‑1 (MQ=255)

                                                                   tGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATcccc                                                                                                                                               <  2:626954/88‑1 (MQ=255)

                                                                         aTGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGaa                                                                            <  2:1333674/149‑1 (MQ=255)

                                                                             cATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGtt                                                                        <  1:1068212/149‑1 (MQ=255)

                                                                              gcttatcagccacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATccc                                                                                                                                                <  1:1112775‑M1/7‑1 (MQ=255)

                                                                                 aaCAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTtctc                                                                    <  4:143096/149‑1 (MQ=255)

                                                                                    aaaTGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTAc                                                                                                                  >  2:680126/1‑100 (MQ=255)

                                                                                       tGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGaa                                                                                                  >  3:1287649/1‑113 (MQ=255)

                                                                                       ccacgacgagaagcgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTAt                                                                                                                                                   >  4:1232449‑M1/61‑64 (MQ=255)

                                                                                        cacgacgagaaacgttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTcaggcagg                                                                                                                               <  4:267757‑M1/24‑1 (MQ=255)

                                                                                                 aaTAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTtctc                                                                    >  4:1207007/1‑133 (MQ=255)

                                                                                                  aTAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGaa                                                                                                  >  4:555592/1‑102 (MQ=255)

                                                                                                   tAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTcaggcagg                                                                                                                               <  1:879790/72‑1 (MQ=255)

                                                                                                     gttccgtcgcctctatcagcaacttctgccattaatggcgtaaacgTTATCCCCCACCCGGTcaggcagg                                                                                                                               >  1:83837‑M1/47‑70 (MQ=255)

                                                                                                       ttCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGaa                                                                                                  <  1:330624/97‑1 (MQ=255)

                                                                                                       ttCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGaa                                                                                                  >  2:330624/1‑97 (MQ=255)

                                                                                                          aTACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGt                                                                                                >  2:761403/1‑96 (MQ=255)

                                                                                                             cTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGTATAACGCTg                                        >  3:1237271/1‑149 (MQ=255)

                                                                                                              tAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGGTAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTgc                                       >  4:478873/1‑149 (MQ=255)

                                                                                                              tAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCt                                         >  2:1259483/1‑147 (MQ=255)

                                                                                                              tAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCt                                         <  1:1259483/147‑1 (MQ=255)

                                                                                                                   attaattaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCgg                                                  >  4:1441433/1‑133 (MQ=255)

                                                                                                                   attaattaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCgg                                                  <  3:1441433/133‑1 (MQ=255)

                                                                                                                   attaattaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATc                                  >  4:29872/1‑149 (MQ=255)

                                                                                                                       attaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATagag                                                                                     <  3:1358348/94‑1 (MQ=255)

                                                                                                                       attaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAAc                                                                           >  1:1337209/1‑104 (MQ=255)

                                                                                                                       attaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCtcgtc                                                                 <  1:29635/114‑1 (MQ=255)

                                                                                                                        ttaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTgc                                       >  4:196562/1‑139 (MQ=255)

                                                                                                                          aattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTATGCCATTTATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGa                           >  2:1382662/1‑149 (MQ=255)

                                                                                                                           attaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTaa                                                                                                          <  3:55498/69‑1 (MQ=255)

                                                                                                                            ttaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGc                                                                                             >  2:433478/1‑81 (MQ=255)

                                                                                                                            ttaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGt                              >  2:1104502/1‑144 (MQ=255)

                                                                                                                                tGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTgg                                                             <  2:262986/109‑1 (MQ=255)

                                                                                                                                    atatatAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCg                                                   <  2:1241991/115‑1 (MQ=255)

                                                                                                                                        ataGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTcgtcgt                                                               >  4:753999/1‑99 (MQ=255)

                                                                                                                                        ataGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTcgtcgt                                                               <  3:753999/99‑1 (MQ=255)

                                                                                                                                         taGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTa                             <  3:1466434/132‑1 (MQ=255)

                                                                                                                                         taGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTa                             >  4:1466434/1‑132 (MQ=255)

                                                                                                                                          aGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACg           >  1:667197/1‑149 (MQ=255)

                                                                                                                                           gATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGc                                                                                   <  1:597741/76‑1 (MQ=255)

                                                                                                                                            aTGTGAATTATCCCCCACCCGGTCAGGCAGGGGATa                                                                                                                          >  1:1235843/1‑36 (MQ=255)

                                                                                                                                             tgtgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGc                                                                                             >  1:400816/1‑64 (MQ=255)

                                                                                                                                             tgtgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGa                      >  4:860818/1‑135 (MQ=255)

                                                                                                                                              gtgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTa                             >  4:542445/1‑127 (MQ=255)

                                                                                                                                              gtgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGc                        >  2:1176761/1‑132 (MQ=255)

                                                                                                                                               tgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCGTTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGt      >  1:1387148/1‑149 (MQ=255)

                                                                                                                                               tgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGt                              >  4:1190468/1‑125 (MQ=255)

                                                                                                                                               tgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGt                              <  3:1190468/125‑1 (MQ=255)

                                                                                                                                                 aaTTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCt                                 <  2:580074/120‑1 (MQ=255)

                                                                                                                                                  aTTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGc   <  1:783091/149‑1 (MQ=255)

                                                                                                                                                  aTTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGc   >  1:1005420/1‑149 (MQ=255)

                                                                                                                                                   TTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAAc                                                                           <  1:242089‑M1/76‑1 (MQ=255)

                                                                                                                                                   TTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTcgtcgt                                                               >  3:712697‑M1/1‑88 (MQ=255)

                                                                                                                                                   TTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTcgtcgt                                                               <  4:712697‑M1/88‑1 (MQ=255)

                                                                                                                                                   TTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCg  >  3:1315580‑M1/1‑149 (MQ=255)

TGAGGTTTTCATAACGATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCG  >  NC_000913/3727737‑3728032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.