BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3735295	432 (3.130)	31 (0.240)	17/212	NT	6.8%	coding (317/1179 nt)	xylR	xylose divergent operon transcriptional activator
*	?	NC_000913	= 3735302	451 (3.490)	31 (0.240)	17/212	NT	6.8%	coding (324/1179 nt)	xylR	xylose divergent operon transcriptional activator

Only 100 of 602 total aligned reads displayed.

GGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTG  >  NC_000913/3735147‑3735443

ggAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCT                                                                                                                                                      <  2:1419079‑M1/149‑1 (MQ=255)

   gaTGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGt                                                                                                                                                   >  3:784618/1‑149 (MQ=255)

      ggCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGa                                                                                                                                                >  3:1312489/1‑149 (MQ=255)

        cGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAa                                                                                                                                              >  3:745438‑M2/1‑148 (MQ=255)

         gTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTgg                                                                                                                                                    >  1:1046343/1‑142 (MQ=255)

          tCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAagc                                                                                                                                            >  4:452302‑M2/1‑146 (MQ=255)

            aTTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTttcaaccagcgc                                                                                                                                          <  4:1464325‑M1/149‑13 (MQ=255)

               gCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTttcaaccagcgcata                                                                                                                                       <  1:718231‑M1/149‑16 (MQ=255)

                ccGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTttcaaccagcgcata                                                                                                                                       <  4:1113901‑M1/148‑16 (MQ=255)

                     ttCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCa                                                                                                                                 >  1:1108098/1‑149 (MQ=255)

                     ttCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCa                                                                                                                                 >  3:1422690/1‑149 (MQ=255)

                       cgacgaCAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAa                                                                                                                                              >  1:542624‑M2/1‑133 (MQ=255)

                            acAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAa                                                                                                                                              >  4:282557‑M2/1‑128 (MQ=255)

                            acAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                          <  4:605599/149‑1 (MQ=255)

                              aaaCAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAa                                                                                                                                              <  4:925984‑M2/127‑2 (MQ=255)

                                aCAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTttcaaccagcgcata                                                                                                                                       >  3:204540‑M1/1‑117 (MQ=255)

                                aCAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                          <  4:1416911/145‑1 (MQ=255)

                                    aTCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTttcaaccagcgcata                                                                                                                                       <  1:169482‑M1/128‑16 (MQ=255)

                                    aTCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTgg                                                                                                                                                    >  1:998640/1‑115 (MQ=255)

                                     tCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGc                                                                                                                 <  4:1312489/149‑1 (MQ=255)

                                       gAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAg                                                                                                                   <  2:964688/145‑1 (MQ=255)

                                       gAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGt                                                                                                               <  3:872504/149‑1 (MQ=255)

                                        aGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGtt                                                                                                              >  1:376389/1‑149 (MQ=255)

                                               gctggctgATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                          <  1:656445/130‑1 (MQ=255)

                                                   gctgATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                          >  3:485942/1‑126 (MQ=255)

                                                     tgATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctttgctt                                                                                                 >  2:767396/1‑149 (MQ=255)

                                                         gTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTa                                                                                             <  1:940554/149‑1 (MQ=255)

                                                           cGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGt                                                                                                               <  2:740942/129‑1 (MQ=255)

                                                               gTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATg                                                                                           >  4:221781/1‑145 (MQ=255)

                                                                 ccccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTc                                                                                     <  1:767396/149‑1 (MQ=255)

                                                                  cccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTttcaaccagcgcatag                                                                                                                                      >  1:28109‑M1/1‑83 (MQ=255)

                                                                  cccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAgg                                                                                                                  >  3:1091005/1‑119 (MQ=255)

                                                                  cccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctt                                                                                                      <  1:516028/131‑1 (MQ=255)

                                                                  cccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTcc                                                                                    >  1:1426788/1‑149 (MQ=255)

                                                                  cccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTcc                                                                                    >  2:1466277/1‑149 (MQ=255)

                                                                   ccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTttcaacc                                                                                                                                               <  1:456550‑M1/89‑8 (MQ=255)

                                                                   ccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCAtt                                                                                                                                       <  4:789864/97‑1 (MQ=255)

                                                                   ccATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTg                                                                                                                                   >  3:177840/1‑101 (MQ=255)

                                                                    cATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgct                                                                                                       <  4:1073957/128‑1 (MQ=255)

                                                                                     gcTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGt                                                                 >  2:830330/1‑149 (MQ=255)

                                                                                     gcTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGt                                                                 >  2:51458/1‑149 (MQ=255)

                                                                                       tCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGtt                                                                                                              <  4:1217966/102‑1 (MQ=255)

                                                                                       tCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCtt                                                                                      >  1:119899/1‑126 (MQ=255)

                                                                                       tCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTg                                                               <  4:1170079/149‑1 (MQ=255)

                                                                                         gTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAATGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATc                                                                              >  3:1263801/1‑132 (MQ=255)

                                                                                         gTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATc                                                                              <  4:1263801/132‑1 (MQ=255)

                                                                                          tATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTa                                                                                             >  2:1243225/1‑116 (MQ=255)

                                                                                          tATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTcc                                                                                    <  4:517668/125‑1 (MQ=255)

                                                                                          tATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGc                                                            >  2:541060/1‑149 (MQ=255)

                                                                                           aTCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGcc                                                           >  4:200470/1‑149 (MQ=255)

                                                                                            tCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCgctttgcttt                                                                                                <  1:591325/111‑1 (MQ=255)

                                                                                               ccTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTg                                                       >  3:657097/1‑149 (MQ=255)

                                                                                                cTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCAttt                                                                                                                              >  3:1179096/1‑77 (MQ=255)

                                                                                                cTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTg                                                               >  1:409169/1‑140 (MQ=255)

                                                                                                 ttGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGt                                                                                                                                                   <  2:649991/55‑1 (MQ=255)

                                                                                                 ttGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAg                                                     >  1:870274/1‑149 (MQ=255)

                                                                                                  tGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAgc                                                    <  2:380881/149‑1 (MQ=255)

                                                                                                     aGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATg                                                                                           <  4:770103/107‑1 (MQ=255)

                                                                                                      gAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGa                                                >  2:1180700/1‑149 (MQ=255)

                                                                                                      gAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGa                                                <  2:613548/149‑1 (MQ=255)

                                                                                                       aaaGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGaa                                               <  1:614938/149‑1 (MQ=255)

                                                                                                       aaaGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGaa                                               <  2:1368246/149‑1 (MQ=255)

                                                                                                           ttACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATg                                           <  4:724087/149‑1 (MQ=255)

                                                                                                              cccacccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCAt                                        <  2:870274/149‑1 (MQ=255)

                                                                                                               ccacccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGc                                          <  1:1384292/146‑1 (MQ=255)

                                                                                                                 acccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAAc                                                                                                           <  3:1352810/79‑1 (MQ=255)

                                                                                                                 acccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAAc                                                                                                           >  4:1352810/1‑79 (MQ=255)

                                                                                                                 acccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCtttt                                                                                               <  2:495226/91‑1 (MQ=255)

                                                                                                                 acccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGaa                                               >  1:1350367/1‑139 (MQ=255)

                                                                                                                 acccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTc                                     <  1:1238334/149‑1 (MQ=255)

                                                                                                                   ccGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAAc                                                                   >  4:880198/1‑117 (MQ=255)

                                                                                                                     gTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCa                                 <  1:830330/149‑1 (MQ=255)

                                                                                                                      ttCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaa                                                                                                                            >  4:376364/1‑57 (MQ=255)

                                                                                                                      ttCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAAc                                                                                                           <  2:585139/74‑1 (MQ=255)

                                                                                                                      ttCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCg                                    <  4:828149/145‑1 (MQ=255)

                                                                                                                         aTTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTaaaa                                                                                                                          <  2:130985/56‑1 (MQ=255)

                                                                                                                         aTTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTg                                                               >  3:699996/1‑115 (MQ=255)

                                                                                                                         aTTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCtt                             <  3:984857/149‑1 (MQ=255)

                                                                                                                          ttACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTg                            >  3:820884/1‑149 (MQ=255)

                                                                                                                            aCATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATg                                                                                           >  2:914073/1‑84 (MQ=255)

                                                                                                                            aCATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATg                                                                                           <  1:914073/84‑1 (MQ=255)

                                                                                                                                tGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCg                      >  3:608265/1‑149 (MQ=255)

                                                                                                                                  ccACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGa                                                      >  3:380873/1‑115 (MQ=255)

                                                                                                                                      cGATAACTATGCGCTGGTTGAAAGCGCATTTTTGc                                                                                                                                  <  4:567620/35‑1 (MQ=255)

                                                                                                                                       gATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTggg                                                             <  2:305535/103‑1 (MQ=255)

                                                                                                                                       gATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGaaaa               <  3:1038198/149‑1 (MQ=255)

                                                                                                                                       gATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGaaaa               <  2:1217343/149‑1 (MQ=255)

                                                                                                                                            cTATGCGCTGGTTGAAagcgcatagttatcggtggcaatgtaatgaacgggtgggtaactttctgcaaggtgatacga                                                                                 <  3:1130056‑M2/78‑63 (MQ=255)

                                                                                                                                             tATGCGCTGGTTGAAagcgcatagttatcggtggcaatgtaatgaacgggtgggtaactttctgcaaggtgatacgagccgccaaccccaacaatggggacgtcgacatcagccagcgcttgctcgatctgtttgtcgtcgaagtcggc         <  3:230753‑M2/149‑135 (MQ=255)

                                                                                                                                             tATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGc                                                                                                                 >  3:554263/1‑45 (MQ=255)

                                                                                                                                                gcgcTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGtt                                                                >  2:178165/1‑91 (MQ=255)

                                                                                                                                                 cacTGGTTGAAAGCGTATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCAATGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGa     <  2:423317/147‑1 (MQ=255)

                                                                                                                                                  gcTttcaaccagcgcatagttatcggtggcaatgtactgaacgggtgggtaactttctgcaaggtgatacgagccgccaaccccaacaatggg                                                            >  1:497080‑M1/1‑3 (MQ=255)

                                                                                                                                                  gcTttcaaccagcgcatagttatcggtggcaatgtaatgaacgggtgggtaactttctgcaaggtgatacgagccgccaaccccaacaatggggacgtcgacatcagccagcgcttgctcgatctgtttgtcgtc                  <  4:697760‑M1/135‑133 (MQ=255)

                                                                                                                                                  gcTttcaaccagcgcatagttatcggtggcaatgtaatgaacgggtgggtaactttctgcaaggtgatacgagccgccaaccccaacaatggg                                                            >  1:1283035‑M1/1‑3 (MQ=255)

                                                                                                                                                  gcTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAatat                                            <  3:290728/109‑1 (MQ=255)

                                                                                                                                                  gcTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCACGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAg    >  3:1239364/1‑149 (MQ=255)

                                                                                                                                                    tttcaaccagcgcatagttatcggtggcaatgtaatgaacgggtgggtaactttctgcaaggtgatacgagccgccaaccccaacaatggggacgtcgacatcagccagcgcttgctcgatctgttt                        >  3:925984‑M1/1‑1 (MQ=255)

                                                                                                                                                    tttcaaccagcgcatagttatcggtggcaatgtaatgaacgggtgggtaactttct                                                                                               >  1:32256‑M1/1‑1 (MQ=255)

                                                                                                                                                    tGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAgcgc                                                  <  2:1097638/101‑1 (MQ=255)

GGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTG  >  NC_000913/3735147‑3735443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.