New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4591667	71 (0.510)	4 (0.030)	4/214	NT	5.5%	coding (11/1656 nt)	tsr	methyl‑accepting chemotaxis protein I, serine sensor receptor
	?	NC_000913	= 4591703	71 (0.540)					coding (47/1656 nt)	tsr	methyl‑accepting chemotaxis protein I, serine sensor receptor

AATAATTTATGTAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGC  >  NC_000913/4591521‑4591813                                                                                                                                                   |                                                                                                                                                   aataatTTATGTAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTa                                                                                                                                                  >  4:362566/1‑149 (MQ=255) aataatTTATGTAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTa                                                                                                                                                  <  3:362566/149‑1 (MQ=255)               ataatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                                                                                                                                          >  1:1103737/1‑143 (MQ=255)               ataatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                                                                                                                                          <  2:1103737/143‑1 (MQ=255)                   tGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCt                                                                                                                                >  4:469232/1‑149 (MQ=255)                                   gagTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGc                                                                                                                >  4:1424775/1‑149 (MQ=255)                                        tgAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCcgttt                                                                                                           <  1:123028‑M2/149‑6 (MQ=255)                                          aaTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgtta                                                                                                                                      >  1:948427/1‑118 (MQ=255)                                          aaTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGa                                                                                                                                      <  2:948427/120‑1 (MQ=255)                                           aTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgt                                                                                                                                        <  4:671908/117‑1 (MQ=255)                                           aTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgt                                                                                                                                        >  3:671908/1‑117 (MQ=255)                                           aTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActgctg                                                                                                                        <  4:13089/133‑1 (MQ=255)                                           aTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActgctg                                                                                                                        >  3:13089/1‑133 (MQ=255)                                           aTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTg                                                                                                        <  2:123028/149‑1 (MQ=255)                                            tAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg                                                                                                                       <  2:1324305/133‑1 (MQ=255)                                            tAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg                                                                                                                       >  1:1324305/1‑133 (MQ=255)                                                aTTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAct                                                                                                                            >  4:1001011/1‑124 (MQ=255)                                                aTTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAct                                                                                                                            <  3:1001011/124‑1 (MQ=255)                                                aTTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCtt                                                                                                   <  3:469232/149‑1 (MQ=255)                                                     cTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGc                                                                                                      >  3:1078765/1‑141 (MQ=255)                                                     cTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGc                                                                                                      <  4:1078765/141‑1 (MQ=255)                                                                 tcCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAgg                                                                                  >  1:208370/1‑149 (MQ=255)                                                                   cgcgGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                                                                                                                                          <  1:1023299/91‑1 (MQ=255)                                                                   cgcgGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                                                                                                                                          >  2:1023299/1‑91 (MQ=255)                                                                           atTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAc                                                                                                                                     >  1:1140105/1‑88 (MQ=255)                                                                           atTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAc                                                                                                                                     <  2:1140105/88‑1 (MQ=255)                                                                             tCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCtt                                                                      <  2:208370/149‑1 (MQ=255)                                                                               aTAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAGACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTa                                                                    >  4:848721/1‑149 (MQ=255)                                                                               aTAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGt                                                                          <  4:1091858/143‑1 (MQ=255)                                                                               aTAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGt                                                                          >  3:1091858/1‑143 (MQ=255)                                                                                tAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGt                                                                              <  1:567116/138‑1 (MQ=255)                                                                                tAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGt                                                                              >  2:567116/1‑138 (MQ=255)                                                                                tAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTaa                                                                   >  1:788714/1‑149 (MQ=255)                                                                                         tcctttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTaaa                                                          <  3:1424775/149‑1 (MQ=255)                                                                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTTAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGaa                                                       >  1:2559/1‑149 (MQ=255)                                                                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGgccaaaaccagcagtaagctggtcacaattttgatacgt                                                                                                             <  1:290623‑M1/95‑40 (MQ=255)                                                                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGgccaaaaccagcagtaagctggtcacaattttgatacgt                                                                                                             >  2:290623‑M1/1‑56 (MQ=255)                                                                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGcc                                                               <  3:1448253/141‑1 (MQ=255)                                                                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGcc                                                               >  4:1448253/1‑141 (MQ=255)                                                                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGaa                                                       >  1:120907/1‑149 (MQ=255)                                                                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGaa                                                       <  2:2559/149‑1 (MQ=255)                                                                                            tttccAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGaa                                                       <  2:120907/149‑1 (MQ=255)                                                                                                 aGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgt                                                                                                                                        >  4:1332348/1‑63 (MQ=255)                                                                                                 aGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgt                                                                                                                                        <  3:1332348/63‑1 (MQ=255)                                                                                                   gCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgt                                                                                                                                        >  4:1277024/1‑61 (MQ=255)                                                                                                   gCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgt                                                                                                                                        <  3:1277024/61‑1 (MQ=255)                                                                                                   gCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGcc                                                               <  3:241028/134‑1 (MQ=255)                                                                                                   gCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGcc                                                               >  4:241028/1‑134 (MQ=255)                                                                                                        aaaTCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTaaa                                                          >  1:570530/1‑134 (MQ=255)                                                                                                        aaaTCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTaaa                                                          <  2:570530/134‑1 (MQ=255)                                                                                                             ttGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTTCTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTaa                                                                   <  2:764789/120‑1 (MQ=255)                                                                                                             ttGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTaa                                                                   >  1:764789/1‑120 (MQ=255)                                                                                                             ttGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGaa                                                       >  1:1460809/1‑132 (MQ=255)                                                                                                             ttGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGaa                                                       <  2:1460809/132‑1 (MQ=255)                                                                                                             ttGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCa                                      >  3:67744/1‑149 (MQ=255)                                                                                                                 aTCGGTCCACAGGAAAGAGAAACCATGTTAAAACGgccaaaaccagcagtaagctggtcacaattttgatacgtt                                                                                                            <  4:677526‑M1/75‑41 (MQ=255)                                                                                                                 aTCGGTCCACAGGAAAGAGAAACCATGTTAAAACGgccaaaaccagcagtaagctggtcacaattttgatacgtt                                                                                                            >  3:677526‑M1/1‑35 (MQ=255)                                                                                                                 aTCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGt                                  >  3:1196379/1‑149 (MQ=255)                                                                                                                  tCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGtt                                 <  2:788714/149‑1 (MQ=255)                                                                                                                         acaGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGGCCACCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGc                                                                <  2:1364881/111‑1 (MQ=255)                                                                                                                         acaGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGc                                                                >  1:1364881/1‑111 (MQ=255)                                                                                                                          caGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAAc                         <  4:67744/149‑1 (MQ=255)                                                                                                                           aGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGa                                                    <  4:817806/121‑1 (MQ=255)                                                                                                                           aGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGa                                                    >  3:817806/1‑121 (MQ=255)                                                                                                                             gAAAGAGAAACCATGTTAAAACGTATCAAAGTTGTGACCAGCTTACTGCTGGTTTTg                                                                                                                  >  4:906792/1‑57 (MQ=255)                                                                                                                             gAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCAt                      >  2:1330022/1‑149 (MQ=255)                                                                                                                             caaaGAGAAACCATGTTCAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTg                                                                                                                  <  3:906792/56‑1 (MQ=255)                                                                                                                              aaaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTg                                                                                                        <  1:990985/66‑1 (MQ=255)                                                                                                                              aaaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTg                                                                                                        >  2:990985/1‑66 (MQ=255)                                                                                                                              aaaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAAt                                                      >  3:654323/1‑116 (MQ=255)                                                                                                                              aaaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAAt                                                      <  4:654323/116‑1 (MQ=255)                                                                                                                               aaGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTc                    <  3:848721/149‑1 (MQ=255)                                                                                                                                  cgaAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATg                                                                 >  2:1453895/2‑101 (MQ=255)                                                                                                                                  agaAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATg                                                                 <  1:1453895/101‑1 (MQ=255)                                                                                                                                     aaCCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACaa                                                                                             >  2:1332401/1‑70 (MQ=255)                                                                                                                                     aaCCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACaa                                                                                             <  1:1332401/70‑1 (MQ=255)                                                                                                                                         aTGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAgcagca          >  1:1155960/1‑149 (MQ=255)                                                                                                                                            ttAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGCCATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATc       >  4:838339/1‑149 (MQ=255)                                                                                                                                               aaaCGgccaaaaccagcagtaagctggtcacaattttgatacgttttaacatggtttctctttcctgtggaccgatgcaagattttcggcctggaaaggaaaaactttatgaatatcccgcggagattacgccgagtgaattttattca    <  1:123028‑M1/149‑145 (MQ=255)                                                                                                                                               aaaCGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCAc    <  2:1155960/149‑1 (MQ=255)                                                                                                                                                aaCGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCcgttttaacatggtttctctttcctgtggaccgat                                                                             <  4:677526‑M2/75‑36 (MQ=255)                                                                                                                                                aaCGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCcgttttaacatggtttctctttcctgtggaccgat                                                                             >  3:677526‑M2/1‑40 (MQ=255)                                                                                                                                                 aCGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCcgttttaacatggtttctctttcctgtggaccgatgcaagattttcggcctggaaa                                                        >  2:290623‑M2/1‑39 (MQ=255)                                                                                                                                                 aCGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCcgttttaacatggtttctctttcctgtggaccgatgcaagattttcggcctggaaa                                                        <  1:290623‑M2/95‑57 (MQ=255)                                                                                                                                                 aCGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGc  >  3:1457359/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   AATAATTTATGTAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGC  >  NC_000913/4591521‑4591813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.