New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2887529 =	52 (0.380)	6 (0.050)	5/212	NT	12.0%	intergenic (+120/+49)	sokX/cysH	sok‑related sRNA, function unknown/phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent
	?	NC_000913	2887561 =	39 (0.300)					intergenic (+152/+17)	sokX/cysH	sok‑related sRNA, function unknown/phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent

GGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGT  >  NC_000913/2887414‑2887708                                                                                                                                                    |                                                                                                                                                    ggAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTaa                                                                                                                                                    <  2:1286618/149‑1 (MQ=255) ggAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTaa                                                                                                                                                    >  1:245193/1‑149 (MQ=255) ggAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTaa                                                                                                                                                    <  2:245193/149‑1 (MQ=255)                    aCGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAc                                                                                                                                 <  3:943387/149‑1 (MQ=255)                          gACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCg                                                                                                                           <  4:847697/149‑1 (MQ=255)                                       aCCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAAt                                                                                                                                                   >  1:1341322/1‑112 (MQ=255)                                       aCCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAAt                                                                                                                                                   <  2:1341322/112‑1 (MQ=255)                                         ccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAc                                                                                                                                 <  3:330192/128‑1 (MQ=255)                                         ccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAc                                                                                                                                 >  4:330192/1‑128 (MQ=255)                                         ccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCgt                                                                                                                          >  4:674431/1‑135 (MQ=255)                                         ccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCgt                                                                                                                          <  3:674431/135‑1 (MQ=255)                                               ccATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCttttt                                                                                                      <  1:724180/149‑1 (MQ=255)                                                 aTTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAAtt                                                                                                                                                  <  2:363719/103‑1 (MQ=255)                                                 aTTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAAtt                                                                                                                                                  >  1:363719/1‑103 (MQ=255)                                                    cTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGTAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGcc                                                                                                 >  3:695411/1‑149 (MQ=255)                                                       taCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTc                                                                                                                                              <  4:537290/101‑1 (MQ=255)                                                       taCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTc                                                                                                                                              >  3:537290/1‑101 (MQ=255)                                                          cTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACAt                                                                                                               >  3:1010789/1‑129 (MQ=255)                                                          cTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACAt                                                                                                               <  4:1010789/129‑1 (MQ=255)                                                          cTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGaa                                                                                           >  4:805526/1‑149 (MQ=255)                                                           tGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGaaa                                                                                          <  4:695411/149‑1 (MQ=255)                                                            gATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAAc                                                                                         >  3:1163428/1‑149 (MQ=255)                                                                aTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTaa                                                                                                    <  1:777204/134‑1 (MQ=255)                                                                aTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTaa                                                                                                    >  2:777204/1‑134 (MQ=255)                                                                 ttcttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAAcc                                                                                                                    <  2:1258162/117‑1 (MQ=255)                                                                 ttcgtcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAAcc                                                                                                                    >  1:1258162/1‑117 (MQ=255)                                                                    ttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCgt                                                                                                                          >  1:521842/1‑108 (MQ=255)                                                                    ttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCgt                                                                                                                          <  2:521842/108‑1 (MQ=255)                                                                      cccGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTttcttt                                                                               <  3:805526/149‑2 (MQ=255)                                                                       aagggaatgtgggttacacgaagggtaaatattgccggacaaattAAACGCCCCCATCATTTCTGACAGAGGCGTTTaa                                                                                                                                                    >  4:1178487‑M1/46‑79 (MQ=255)                                                                       aagggaatgtgggttacacgaagggtaaatattgccggacaaattAAACGCCCCCATCATTTCTGACAGAGGCGTTTaa                                                                                                                                                    <  3:1178487‑M1/34‑1 (MQ=255)                                                                          ggaatgtgggttacacgaagggtaaatattgccggacaaattAAACGCCCCCATCATTTCTGACAGAGGCGTTTaa                                                                                                                                                    <  4:973584‑M1/34‑1 (MQ=255)                                                                          ggaatgtgggttacacgaagggtaaatattgccggacaaattAAACGCCCCCATCATTTCTGACAGAGGCGTTTaa                                                                                                                                                    >  3:973584‑M1/43‑76 (MQ=255)                                                                                     tttAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCggg                                                                >  4:392088/1‑149 (MQ=255)                                                                                            tCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTaa                                                                                                                      <  4:524977/88‑1 (MQ=255)                                                                                            tCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTaa                                                                                                                      >  3:524977/1‑88 (MQ=255)                                                                                                gAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTAc                                                     <  4:1163428/149‑1 (MQ=255)                                                                                                  aTGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACgg                                                   <  3:392088/149‑1 (MQ=255)                                                                                                      tgctCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTttctttgg                                                                             <  4:196204/119‑4 (MQ=255)                                                                                                      tgctCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTttctttgg                                                                             >  3:196204/1‑116 (MQ=255)                                                                                                      tgctCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGtt                                                <  2:468246/148‑1 (MQ=255)                                                                                                      tgctCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGtt                                                >  1:468246/1‑148 (MQ=255)                                                                                                       gctCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACg                                                    <  1:1178176/143‑1 (MQ=255)                                                                                                       gctCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACg                                                    >  2:1178176/1‑143 (MQ=255)                                                                                                                  ttaaacgcctctgtcagaaatgatgggggcgtttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTcc                                                                                                            <  4:973584‑M2/42‑1 (MQ=255)                                                                                                                  ttaaacgcctctgtcagaaatgatgggggcgtttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTcc                                                                                                            >  3:973584‑M2/35‑76 (MQ=255)                                                                                                                  ttaaacgcctctgtcagaaatgatgggggcgtttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCtt                                                                                                         <  3:1178487‑M2/45‑1 (MQ=255)                                                                                                                  ttaaacgcctctgtcagaaatgatgggggcgtttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCtt                                                                                                         >  4:1178487‑M2/35‑79 (MQ=255)                                                                                                                      acgcctctgtcagaaatgatgggggcgtttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACgg                                                   <  1:206385‑M2/99‑1 (MQ=255)                                                                                                                      acgcctctgtcagaaatgatgggggcgtttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACgg                                                   >  2:206385‑M2/31‑129 (MQ=255)                                                                                                                          CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTc                                                             <  1:523409‑M1/115‑1 (MQ=255)                                                                                                                          CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTc                                                             >  2:523409‑M1/1‑115 (MQ=255)                                                                                                                           cccATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATa                          >  1:623101/1‑149 (MQ=255)                                                                                                                              atcatTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTttc                                                                                  >  3:19668/1‑90 (MQ=255)                                                                                                                              atcatTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTttc                                                                                  <  4:19668/90‑1 (MQ=255)                                                                                                                              atcatTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAat                       >  1:637432/1‑149 (MQ=255)                                                                                                                               tcatTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGTGTATCGCCCACCGATAAata                      >  1:542559/1‑149 (MQ=255)                                                                                                                                      tGACAGACGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCG‑CCACCGATAAATATCCTTCAt              >  2:785698/1‑149 (MQ=255)                                                                                                                                        aCAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTccc                                                           <  3:548199/103‑1 (MQ=255)                                                                                                                                        aCAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTccc                                                           >  4:548199/1‑103 (MQ=255)                                                                                                                                         cAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCG‑CCACCGATAAATATCCTTCATccc           <  1:785698/149‑1 (MQ=255)                                                                                                                                          agagGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTccc                                                                                                           >  2:11289/1‑53 (MQ=255)                                                                                                                                          agagGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTccc                                                                                                           <  1:11289/53‑1 (MQ=255)                                                                                                                                          agagGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTa                                       <  2:1217263/121‑1 (MQ=255)                                                                                                                                          agagGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTa                                       >  1:1217263/1‑121 (MQ=255)                                                                                                                                                 tttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATgg                                          >  3:1237060‑M2/4‑111 (MQ=255)                                                                                                                                                 tttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATgg                                          <  4:1237060‑M2/108‑1 (MQ=255)                                                                                                                                                 tttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGt                                        <  4:270031‑M2/110‑1 (MQ=255)                                                                                                                                                 tttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGt                                        >  3:270031‑M2/4‑113 (MQ=255)                                                                                                                                                 tttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATgg    >  1:722486‑M2/4‑149 (MQ=255)                                                                                                                                                 tttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATgg    >  1:844005‑M2/4‑149 (MQ=255)                                                                                                                                                   tAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGt  <  2:844005‑M2/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGT  >  NC_000913/2887414‑2887708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.