New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3736321NA (NA)23 (0.190) 21/198 NT NA noncoding (168/171 nt) REP268 (repetitive extragenic palindromic) element; contains 4 REP sequences REP268 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 3736325 NA (NA)intergenic (+168/+28) xylR/bax xylose divergent operon transcriptional activator/putative glucosaminidase

Only 100 of 236 total aligned reads displayed.

ATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACT  >  NC_000913/3736183‑3736473
                                                                                                                                                |                                                                                                                                                    
aTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCGTGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcgg                                                                                                                                                <  2:1448730‑M2/149‑7 (MQ=255)
        aCGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCagtcggataa                                                                                                                                            <  4:260686‑M2/145‑11 (MQ=255)
         cGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtc                                                                                                                                                  >  4:608298‑M2/1‑134 (MQ=255)
                   ttGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCagtcggataa                                                                                                                                            <  1:30144‑M2/134‑11 (MQ=255)
                         gataaggcgttcacGCCGCATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcggataag                                                                                                                                           >  3:745254‑M2/6‑118 (MQ=255)
                                  tGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAa                                                                                                                                                     >  4:675369‑M2/1‑109 (MQ=255)
                                   gAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAag                                                                                                                                                    <  3:754388‑M2/110‑3 (MQ=255)
                                    aaCGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCaa                                                                                                                                     <  3:66715/124‑1 (MQ=255)
                                       gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCGACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCagtcggataag                                                                                                                                           <  1:425819‑M2/115‑12 (MQ=255)
                                       gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCAgtcggataag                                                                                                                                            >  2:425819‑M2/1‑105 (MQ=255)
                                       gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCagtcggataag                                                                                                                                           >  3:852075‑M2/1‑104 (MQ=255)
                                       gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCagtcggataa                                                                                                                                            <  2:5182‑M2/114‑11 (MQ=255)
                                       gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtc                                                                                                                                                  >  3:920881‑M2/1‑104 (MQ=255)
                                         cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcgg                                                                                                                                                <  3:1016988‑M2/108‑7 (MQ=255)
                                         cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcgg                                                                                                                                                >  4:1016988‑M2/1‑102 (MQ=255)
                                                gACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCagtcggataa                                                                                                                                            >  3:868182‑M2/1‑95 (MQ=255)
                                                    tACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTa                                                                                            <  4:886136/149‑1 (MQ=255)
                                                     aCCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtc                                                                                                                                                  >  1:143055‑M2/1‑90 (MQ=255)
                                                        cGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCt                                                                                        <  3:515541/149‑1 (MQ=255)
                                                                aTGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtc                                                                                                                                                  >  1:878005‑M2/1‑79 (MQ=255)
                                                                  gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTg                                                                                                <  1:101453/131‑1 (MQ=255)
                                                                  gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTg                                                                                                >  2:101453/1‑131 (MQ=255)
                                                                    tAAAACGCACCAACAACGCTTCAGGCTCGTACCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTTGTCagtcggata                                                                                                                                             >  4:921166‑M2/1‑75 (MQ=255)
                                                                      aaaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTgg                                                                                      >  3:1465622/1‑137 (MQ=255)
                                                                      aaaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTgg                                                                                      <  4:1465622/137‑1 (MQ=255)
                                                                       aaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcggataa                                                                                                                                            <  4:500658‑M2/82‑11 (MQ=255)
                                                                            aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcggat                                                                                                                                              <  4:4647‑M2/75‑9 (MQ=255)
                                                                            aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcggat                                                                                                                                              >  3:4647‑M2/1‑67 (MQ=255)
                                                                               aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAa                                                                                                                                                     <  4:333332‑M2/65‑2 (MQ=255)
                                                                               aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGaaa                                                                                                                                <  3:1421762/86‑1 (MQ=255)
                                                                               aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGaaa                                                                                                                                >  4:1421762/1‑86 (MQ=255)
                                                                               aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTCATCCGACTGACAagtcggatga                                                                                                                                            <  2:408302‑M2/74‑11 (MQ=255)
                                                                                   acGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTtat                                                             >  2:1324235/1‑149 (MQ=255)
                                                                                   acGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTtat                                                             <  1:1324235/149‑1 (MQ=255)
                                                                                       ttCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCt                                                                                        <  2:699747/118‑1 (MQ=255)
                                                                                       ttCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAAct                                                         >  4:891831/1‑149 (MQ=255)
                                                                                          aGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcggataa                                                                                                                                            <  4:1348160‑M2/63‑11 (MQ=255)
                                                                                              tCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGcgccgc                                                                                                            >  4:780246/1‑91 (MQ=255)
                                                                                                gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCaa                                                                                                                                     >  1:674290/1‑64 (MQ=255)
                                                                                                gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTa                                                                                                                        >  3:645598/1‑77 (MQ=255)
                                                                                                 tAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg                                               <  3:891831/149‑1 (MQ=255)
                                                                                                   gCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACata                                                                                                                    >  2:621332/1‑78 (MQ=255)
                                                                                                   gCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACata                                                                                                                    <  1:621332/78‑1 (MQ=255)
                                                                                                    cTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAagtcggataag                                                                                                                                           <  3:771611‑M2/54‑12 (MQ=255)
                                                                                                        aCTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGAtt                                                                                                        <  1:103712/85‑1 (MQ=255)
                                                                                                        aCTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGAtt                                                                                                        >  2:103712/1‑85 (MQ=255)
                                                                                                            ccTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGcc                                    >  3:1089230/1‑149 (MQ=255)
                                                                                                             cTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttgtt                                                               <  2:970215/121‑1 (MQ=255)
                                                                                                                   cAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAActct                                                       <  2:1415015/123‑1 (MQ=255)
                                                                                                                    aaaGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGtt                                                                                             >  1:87479/1‑84 (MQ=255)
                                                                                                                    aaaGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGCTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGCAGCCCTTCAGCt                            >  4:285401/1‑149 (MQ=255)
                                                                                                                      aGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa                                                                           >  1:1406812/1‑100 (MQ=255)
                                                                                                                       gTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTta                                                              <  3:109974/112‑1 (MQ=255)
                                                                                                                        tAAAAAGGCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg                                               >  2:796842/1‑126 (MQ=255)
                                                                                                                          aaaaGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtgt                         >  1:1259038/1‑146 (MQ=255)
                                                                                                                           aaaGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTa                                                                     >  2:928143/1‑101 (MQ=255)
                                                                                                                               ccTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTgg                                                                                               >  4:666666/1‑71 (MQ=255)
                                                                                                                               ccTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAg                                                                        <  4:749636/94‑1 (MQ=255)
                                                                                                                               ccTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTACAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatcatc                 >  2:1311824/1‑149 (MQ=255)
                                                                                                                                cTTATCCGACTTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACa                                                                         <  1:1205461/92‑1 (MQ=38)
                                                                                                                                cTTATCCGACTTGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACa                                                                         >  2:1205461/1‑92 (MQ=38)
                                                                                                                                cTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgtt                                                                  >  3:1269219/1‑99 (MQ=255)
                                                                                                                                cTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatc                    >  3:1250747/1‑145 (MQ=255)
                                                                                                                                 ttATCCGACTGACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcacgccgcatccgacaaccacgcagcgttacc               <  3:354781‑M2/149‑136 (MQ=255)
                                                                                                                                 ttATCCGACTGACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgtt                                               <  3:946653‑M2/117‑104 (MQ=255)
                                                                                                                                 ttATCCGACTGACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgtg                                               >  4:946653‑M2/1‑14 (MQ=255)
                                                                                                                                 ttATCCGACTGACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggta                                                               >  4:1188699‑M2/1‑14 (MQ=255)
                                                                                                                                 ttATCCGACTGACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaa                                                                                                  <  1:379184‑M2/66‑53 (MQ=255)
                                                                                                                                 ttATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttgt                                                                >  2:308618/1‑100 (MQ=255)
                                                                                                                                 ttATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAg                              <  4:1384548/134‑1 (MQ=255)
                                                                                                                                 ttATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAg                              >  3:1384548/1‑134 (MQ=255)
                                                                                                                                  tATCCGACTGACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcac                                            >  2:188088‑M2/1‑13 (MQ=255)
                                                                                                                                  tATCCGACTGACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcac                                            <  1:188088‑M2/119‑107 (MQ=255)
                                                                                                                                  tATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAg                                                                        >  2:1183823/1‑91 (MQ=255)
                                                                                                                                  tATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAg                                                                        <  1:1183823/91‑1 (MQ=255)
                                                                                                                                   aTCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatca                   >  3:80534/1‑143 (MQ=255)
                                                                                                                                   aTCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatca                   <  4:80534/143‑1 (MQ=255)
                                                                                                                                    tCCGACTGACAagtcggataaggctttttactttgtctcaggcagttga                                                                                                                >  3:305861‑M2/1‑11 (MQ=255)
                                                                                                                                    tCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCaa                                                                                                                           <  4:55746/38‑1 (MQ=255)
                                                                                                                                    tCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCaa                                                                                                                           >  3:55746/1‑38 (MQ=255)
                                                                                                                                    tCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGc                                                                              <  1:469579/83‑1 (MQ=255)
                                                                                                                                    tCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAg                                                                    <  4:855705/93‑1 (MQ=255)
                                                                                                                                    tCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtgt                         <  3:1166897/136‑1 (MQ=255)
                                                                                                                                    tCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCtgt            >  3:987237/1‑149 (MQ=255)
                                                                                                                                       gACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGa                                                                            >  4:1232046/1‑82 (MQ=255)
                                                                                                                                       gACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAg                                         <  4:1122107/117‑1 (MQ=255)
                                                                                                                                       gACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatcatc                 <  3:275056/141‑1 (MQ=255)
                                                                                                                                         cTGACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcacgccgcatccgacaaccacgcagcgttacctgatgtga       >  1:938289‑M2/1‑6 (MQ=255)
                                                                                                                                         cTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAg       >  3:168532/1‑149 (MQ=255)
                                                                                                                                           tGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa                                                                           >  2:875688/1‑80 (MQ=255)
                                                                                                                                           tGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCtt                                 <  4:757930/122‑1 (MQ=255)
                                                                                                                                              aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCtgt            <  2:1101646/141‑1 (MQ=255)
                                                                                                                                              aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCtgt            >  1:1101646/1‑141 (MQ=255)
                                                                                                                                              aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCa    >  3:699130/1‑149 (MQ=255)
                                                                                                                                              aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCa    >  2:1285319/1‑149 (MQ=255)
                                                                                                                                              aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGATTATCCTGGTACATTGc                                                                              <  3:1226682/75‑1 (MQ=255)
                                                                                                                                               cAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATaa                                                           >  4:1251452/1‑93 (MQ=255)
                                                                                                                                                aaGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAat                     >  1:725662/1‑130 (MQ=255)
                                                                                                                                                aaGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGt      <  3:887307/145‑1 (MQ=255)
                                                                                                                                                aaGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACt  >  4:1096851/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
ATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGACTGACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACT  >  NC_000913/3736183‑3736473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.