| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,399,902 | A→T | 5.1% | I26N (ATT→AAT) | mreC ← | cell wall structural complex MreBCD transmembrane component MreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,399,902 | 0 | A | T | 5.1% | 288.2 / 4.8 | 79 | I26N (ATT→AAT) | mreC | cell wall structural complex MreBCD transmembrane component MreC |
| Reads supporting (aligned to +/- strand): ref base A (38/37); new base T (2/2); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.67e-01 | |||||||||||
TTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCCCTGCCTGCATCCGA > NC_000913/3399757‑3400043 | ttCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataataa < 2:1279961/149‑1 (MQ=255)ttCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataataa > 1:1279961/1‑149 (MQ=255) tCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataataat < 4:930913/149‑1 (MQ=255) tAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCATTATTATTGc > 2:571719/1‑149 (MQ=255) ttGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCATTATTATTGCCGa < 1:571719/149‑1 (MQ=255) ttGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGa < 3:77108/149‑1 (MQ=255) ttGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGa > 4:77108/1‑149 (MQ=255) aCGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataat > 4:803925/1‑135 (MQ=255) aCGCGAGGCCAGCGACTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaacaat < 3:803925/135‑1 (MQ=255) gcgAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataataa > 3:417984/1‑135 (MQ=255) gcgAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataataa < 4:417984/135‑1 (MQ=255) cAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataa < 2:557526/125‑1 (MQ=255) cAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataa > 1:557526/1‑125 (MQ=255) tACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGc > 1:931614/1‑149 (MQ=255) gCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGaa > 1:919807/1‑149 (MQ=255) ccATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGaa > 2:1215482/1‑139 (MQ=255) ccATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGaa < 1:1215482/139‑1 (MQ=255) aTCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCt < 3:1435564/149‑1 (MQ=255) cAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGc > 1:1256929/1‑110 (MQ=255) cAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGc < 2:1256929/110‑1 (MQ=255) aGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAg > 2:848792/1‑149 (MQ=255) tCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACgg < 2:931614/149‑1 (MQ=255) tCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACgg < 1:848792/149‑1 (MQ=255) ggagCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataat < 1:1327939/92‑1 (MQ=255) ggagCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataat > 2:1327939/1‑92 (MQ=255) gagCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATaa > 3:192867/1‑123 (MQ=255) gagCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATaa < 4:192867/123‑1 (MQ=255) gCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataataat > 1:458567/1‑92 (MQ=255) gCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCaataataat < 2:458567/92‑1 (MQ=255) cATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGaa > 1:596949/1‑117 (MQ=255) cATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGaa < 2:596949/117‑1 (MQ=255) ttGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGc < 3:657596/91‑1 (MQ=255) ttGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGc > 4:657596/1‑91 (MQ=255) ttGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAgcgc > 2:1335037/1‑98 (MQ=255) ttGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAgcgc < 1:1335037/98‑1 (MQ=255) ttGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTATCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGAGACGGGCCACGGCTaaa > 2:236831/1‑149 (MQ=255) tGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTaaaa > 1:907841/1‑149 (MQ=255) gAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGaa < 3:1344264/112‑1 (MQ=255) gAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGaa > 4:1344264/1‑112 (MQ=255) aCAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTgg < 2:907841/149‑1 (MQ=255) tAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACgg < 4:178019/132‑1 (MQ=255) tAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACgg > 3:178019/1‑132 (MQ=255) aGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATa > 4:852877/1‑149 (MQ=255) aGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATa > 2:1348013/1‑149 (MQ=255) aGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATa > 3:671856/1‑149 (MQ=255) gAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATaa > 4:1138637/1‑149 (MQ=255) gACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTAt < 3:852877/149‑1 (MQ=255) gACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTAt < 1:1348013/149‑1 (MQ=255) cTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGc < 4:671856/149‑1 (MQ=255) cTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGc < 3:1138637/149‑1 (MQ=255) cggcggTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTgg < 4:332917/130‑1 (MQ=255) cggcggTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTgg > 3:332917/1‑130 (MQ=255) tCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCAc < 1:1229912/109‑1 (MQ=255) tCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCAc > 2:1229912/1‑109 (MQ=255) atatAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATaa < 3:1109006/127‑1 (MQ=255) atatAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATaa > 4:1109006/1‑127 (MQ=255) atatAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGc < 4:1125863/134‑1 (MQ=255) atatAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGc > 3:1125863/1‑134 (MQ=255) atatAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGt < 2:903150/144‑1 (MQ=255) atatAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGt > 1:903150/1‑144 (MQ=255) ataAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGAc > 4:1082322/1‑149 (MQ=255) taAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATtc < 2:1066462/137‑1 (MQ=255) taAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATtc > 1:1066462/1‑137 (MQ=255) tACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTAt > 3:144431/1‑125 (MQ=255) tACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTAt < 4:144431/125‑1 (MQ=255) cGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACcaggcag < 2:919807/149‑1 (MQ=255) gATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACg < 4:1065573/96‑1 (MQ=255) gATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACg > 3:1065573/1‑96 (MQ=255) aCTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGt < 1:1338533/127‑1 (MQ=255) aCTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGt > 2:1338533/1‑127 (MQ=255) tGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACcaggc < 1:1225830/137‑1 (MQ=255) tGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACcaggc > 2:1225830/1‑137 (MQ=255) aaCGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGaca < 1:236831/149‑1 (MQ=255) aCGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAgg > 3:1376384/1‑62 (MQ=255) aCGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAgg < 4:1376384/62‑1 (MQ=255) cccAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTccc > 1:519166/1‑149 (MQ=255) cAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCcct > 3:910844/1‑149 (MQ=255) cTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCCCTGCCTGCa < 3:1082322/149‑1 (MQ=255) tGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCCCTGCCTGCAt > 1:1379149/1‑149 (MQ=255) gctCGGCATTATTATTGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATa < 3:375528/87‑1 (MQ=255) gctCGGCATTATTATTGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATa > 4:375528/3‑89 (MQ=255) gTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCCCTGCCTGCATc < 4:910844/149‑1 (MQ=255) ggCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATtc > 4:1382586/1‑99 (MQ=255) ggCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATtc < 3:1382586/99‑1 (MQ=255) gCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATtc < 4:651679/98‑1 (MQ=255) gCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATtc > 3:651679/1‑98 (MQ=255) gCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGaca > 2:469548/1‑128 (MQ=255) gCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGaca < 1:469548/128‑1 (MQ=255) cAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCcctgcc < 1:715137/138‑1 (MQ=255) cAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCcctgcc > 2:715137/1‑138 (MQ=255) cAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCCCTGCCTGCATCCGa > 3:475064/1‑147 (MQ=255) cAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCCCTGCCTGCATCCGa < 4:475064/147‑1 (MQ=255) aataataatGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATtctc > 1:552275/1‑98 (MQ=255) aataataatGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATtctc < 2:552275/98‑1 (MQ=255) taataatGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTc < 3:977156/77‑1 (MQ=255) taataatGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTc > 4:977156/1‑77 (MQ=255) | TTCTAATTGGTCACGCGAGGCCAGCGTCTGCGATACGCCATCCAGCAATTCACGAGGAGCATTGGAAACAAAGTAGAAAGGACTGACGGCGGTATCCATATAAGTACGGATTTGACTGAACGTCCCCAGGCGGCTGTCGGCAATAATAATGCCGAGCGCCACCAGCACCGCCAGAATAAGGCGAATCTGTAGCGACGGGCCACGGCTAAAAATTGGCTTCATAAGTTATGCGTATTCTCGTATCAGACCAGGCAGGGTAAACAGACACTTCCCCTGCCTGCATCCGA > NC_000913/3399757‑3400043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |