| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,736,325 | A→C | 9.9% | intergenic (+168/+28) | xylR → / ← bax | xylose divergent operon transcriptional activator/putative glucosaminidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,736,325 | 0 | A | C | 9.9% | 757.5 / 54.6 | 229 | intergenic (+168/+28) | xylR/bax | xylose divergent operon transcriptional activator/putative glucosaminidase |
| Reads supporting (aligned to +/- strand): ref base A (109/96); new base C (11/12); total (120/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 236 total aligned reads displayed.
ATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACT > NC_000913/3736183‑3736473 | aTCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCGTGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcgg < 2:1448730‑M2/149‑7 (MQ=255) aCGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑TGTCagtcggataa < 4:260686‑M2/145‑11 (MQ=255) cGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtc > 4:608298‑M2/1‑134 (MQ=255) ttGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑TGTCagtcggataa < 1:30144‑M2/134‑11 (MQ=255) gataaggcgttcacGCCGCATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcggataag > 3:745254‑M2/6‑118 (MQ=255) tGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAa > 4:675369‑M2/1‑109 (MQ=255) gAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAag < 3:754388‑M2/110‑3 (MQ=255) aaCGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCaa < 3:66715/124‑1 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCGACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑TGTCagtcggataag < 1:425819‑M2/115‑12 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑TTGTCAgtcggataag > 2:425819‑M2/1‑105 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑TGTCagtcggataag > 3:852075‑M2/1‑104 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑TGTCagtcggataa < 2:5182‑M2/114‑11 (MQ=255) gCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtc > 3:920881‑M2/1‑104 (MQ=255) cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcgg < 3:1016988‑M2/108‑7 (MQ=255) cTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcgg > 4:1016988‑M2/1‑102 (MQ=255) gACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑TGTCagtcggataa > 3:868182‑M2/1‑95 (MQ=255) tACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTa < 4:886136/149‑1 (MQ=255) aCCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtc > 1:143055‑M2/1‑90 (MQ=255) cGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCt < 3:515541/149‑1 (MQ=255) aTGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtc > 1:878005‑M2/1‑79 (MQ=255) gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTg < 1:101453/131‑1 (MQ=255) gATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTg > 2:101453/1‑131 (MQ=255) tAAAACGCACCAACAACGCTTCAGGCTCGTACCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑TGTCagtcggata > 4:921166‑M2/1‑75 (MQ=255) aaaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTgg > 3:1465622/1‑137 (MQ=255) aaaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTgg < 4:1465622/137‑1 (MQ=255) aaCGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcggataa < 4:500658‑M2/82‑11 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcggat < 4:4647‑M2/75‑9 (MQ=255) aCCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcggat > 3:4647‑M2/1‑67 (MQ=255) aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAa < 4:333332‑M2/65‑2 (MQ=255) aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGaaa < 3:1421762/86‑1 (MQ=255) aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGaaa > 4:1421762/1‑86 (MQ=255) aacaacGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTCATCCGAC‑T‑GACAagtcggatga < 2:408302‑M2/74‑11 (MQ=255) acGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTtat > 2:1324235/1‑149 (MQ=255) acGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTtat < 1:1324235/149‑1 (MQ=255) ttCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCt < 2:699747/118‑1 (MQ=255) ttCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAAct > 4:891831/1‑149 (MQ=255) aGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcggataa < 4:1348160‑M2/63‑11 (MQ=255) tCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGcgccgc > 4:780246/1‑91 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCaa > 1:674290/1‑64 (MQ=255) gTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTa > 3:645598/1‑77 (MQ=255) tAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg < 3:891831/149‑1 (MQ=255) gCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACata > 2:621332/1‑78 (MQ=255) gCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACata < 1:621332/78‑1 (MQ=255) cTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAagtcggataag < 3:771611‑M2/54‑12 (MQ=255) aCTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGAtt < 1:103712/85‑1 (MQ=255) aCTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGAtt > 2:103712/1‑85 (MQ=255) ccTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGcc > 3:1089230/1‑149 (MQ=255) cTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttgtt < 2:970215/121‑1 (MQ=255) cAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAActct < 2:1415015/123‑1 (MQ=255) aaaGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGtt > 1:87479/1‑84 (MQ=255) aaaGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGCTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGCAGCCCTTCAGCt > 4:285401/1‑149 (MQ=255) aGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa > 1:1406812/1‑100 (MQ=255) gTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTta < 3:109974/112‑1 (MQ=255) tAAAAAGGCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTg > 2:796842/1‑126 (MQ=255) aaaaGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtgt > 1:1259038/1‑146 (MQ=255) aaaGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTa > 2:928143/1‑101 (MQ=255) ccTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTgg > 4:666666/1‑71 (MQ=255) ccTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAg < 4:749636/94‑1 (MQ=255) ccTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTACAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatcatc > 2:1311824/1‑149 (MQ=255) cTTATCCGACTT‑GTC‑AGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACa < 1:1205461/92‑1 (MQ=38) cTTATCCGAC‑T‑TGTCAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACa > 2:1205461/1‑92 (MQ=38) cTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgtt > 3:1269219/1‑99 (MQ=255) cTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatc > 3:1250747/1‑145 (MQ=255) ttATCCGAC‑T‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcacgccgcatccgacaaccacgcagcgttacc < 3:354781‑M2/149‑136 (MQ=255) ttATCCGAC‑T‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgtt < 3:946653‑M2/117‑104 (MQ=255) ttATCCGAC‑T‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgtg > 4:946653‑M2/1‑14 (MQ=255) ttATCCGAC‑T‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggta > 4:1188699‑M2/1‑14 (MQ=255) ttATCCGAC‑T‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaa < 1:379184‑M2/66‑53 (MQ=255) ttATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAgttgt > 2:308618/1‑100 (MQ=255) ttATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAg < 4:1384548/134‑1 (MQ=255) ttATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAg > 3:1384548/1‑134 (MQ=255) tATCCGAC‑T‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcac > 2:188088‑M2/1‑13 (MQ=255) tATCCGAC‑T‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcac < 1:188088‑M2/119‑107 (MQ=255) tATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAg > 2:1183823/1‑91 (MQ=255) tATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAg < 1:1183823/91‑1 (MQ=255) aTCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatca > 3:80534/1‑143 (MQ=255) aTCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatca < 4:80534/143‑1 (MQ=255) tCCGAC‑T‑GACAagtcggataaggctttttactttgtctcaggcagttga > 3:305861‑M2/1‑11 (MQ=255) tCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCaa < 4:55746/38‑1 (MQ=255) tCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCaa > 3:55746/1‑38 (MQ=255) tCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGc < 1:469579/83‑1 (MQ=255) tCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAg < 4:855705/93‑1 (MQ=255) tCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTtgt < 3:1166897/136‑1 (MQ=255) tCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCtgt > 3:987237/1‑149 (MQ=255) gAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGa > 4:1232046/1‑82 (MQ=255) gAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAg < 4:1122107/117‑1 (MQ=255) gAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAatcatc < 3:275056/141‑1 (MQ=255) c‑T‑GACAagtcggataaggctttttactttgtctcaggcagttgagctacgagcctgaagcgttgttggtgcgttttatcatgcctggcgggtaggtcggataaggcgttcacgccgcatccgacaaccacgcagcgttacctgatgtga > 1:938289‑M2/1‑6 (MQ=255) c‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAg > 3:168532/1‑149 (MQ=255) t‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGaa > 2:875688/1‑80 (MQ=255) t‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCtt < 4:757930/122‑1 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCtgt < 2:1101646/141‑1 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCtgt > 1:1101646/1‑141 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCa > 3:699130/1‑149 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCa > 2:1285319/1‑149 (MQ=255) aCAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGATTATCCTGGTACATTGc < 3:1226682/75‑1 (MQ=255) cAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATaa > 4:1251452/1‑93 (MQ=255) aaGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAat > 1:725662/1‑130 (MQ=255) aaGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGt < 3:887307/145‑1 (MQ=255) aaGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACt > 4:1096851/1‑149 (MQ=255) | ATCAGGTAACGCTGCGTGGTTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCCGCCAGGCATGATAAAACGCACCAACAACGCTTCAGGCTCGTAGCTCAACTGCCTGAGACAAAGTAAAAAGCCTTATCCGAC‑T‑GACAAGTCGGATAAGGCTCAAGGAAATGCAATTACATATGCGCCGCGATTAACCGTTGGTTATCCTGGTACATTGCGAACAGGTAGTTGTTATAACTCTTCCCTTTGGTCGAGTAGCCCTTCAGCTTGTGAATCATCGCTGTGGCAGTCACT > NC_000913/3736183‑3736473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |