| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,552,185 | G→C | 5.2% | A184P (GCG→CCG) | uxuA → | mannonate hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,552,185 | 0 | G | C | 5.2% | 565.0 / 16.3 | 155 | A184P (GCG→CCG) | uxuA | mannonate hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (73/74); new base C (5/3); total (78/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.16e-01 | |||||||||||
Only 100 of 157 total aligned reads displayed.
TTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGGCGTGCGTATGGCTGTTC > NC_000913/4552041‑4552332 | ttCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGga > 4:49975/1‑149 (MQ=255)ttCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGga > 3:522348/1‑149 (MQ=255) aaaTGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGgaagaa < 3:49975/149‑1 (MQ=255) aTGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAgg < 3:919982/149‑1 (MQ=255) aTGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAgg < 4:522348/149‑1 (MQ=255) gCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCt < 3:1098297/149‑1 (MQ=255) cATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTa < 1:732792/149‑1 (MQ=255) aaaCGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGaagaag < 3:1081350/136‑1 (MQ=255) aCGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGAcc < 1:1411900/149‑1 (MQ=255) gCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAg > 3:277943/1‑149 (MQ=255) ccAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGtt < 3:171746/149‑1 (MQ=255) aGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTcc > 2:584909/1‑149 (MQ=255) ggAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTaaa > 1:1132044/1‑148 (MQ=255) ttACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGc < 2:920551/115‑1 (MQ=255) tACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTg > 1:946564/1‑144 (MQ=255) acCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTa > 4:336587/1‑149 (MQ=255) gaagaaATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGGCCAGTTCCGTAAACACCTGGAGCTGTACAAAGa > 3:443887/1‑149 (MQ=255) gaagaaATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTaaa < 1:161929/129‑1 (MQ=255) gaagaaATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTaaa > 2:161929/1‑129 (MQ=255) gaagaaATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACaaa > 2:240793/1‑147 (MQ=255) gaagaaATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGa < 3:336587/149‑1 (MQ=255) gaagaaATTGCTCAGGCAGATGAGCGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACaaa < 1:240793/147‑1 (MQ=255) gaaATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTc < 2:357299/111‑1 (MQ=255) gaaATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTc > 1:357299/1‑111 (MQ=255) gaaATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGatat < 1:1305502/149‑1 (MQ=255) aaTTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTa > 3:385349/1‑102 (MQ=255) aTTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCt < 4:1442901/100‑1 (MQ=255) aTTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCt > 3:1442901/1‑100 (MQ=255) cTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACaaa > 2:917840/1‑149 (MQ=255) tCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAacac > 2:1178873/1‑121 (MQ=255) tCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAg > 4:548264/1‑149 (MQ=255) tCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGCGCCCGgaagac < 1:255643/91‑2 (MQ=255) ggCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGa > 3:790290/1‑149 (MQ=255) tGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTgc < 1:584909/149‑1 (MQ=255) aaCGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTgcgc > 3:470065/1‑149 (MQ=255) gCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTaaa > 3:682980/1‑104 (MQ=255) gCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACtt < 4:790290/149‑1 (MQ=255) ccACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACttt < 4:470065/149‑1 (MQ=255) aCTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGc < 3:548264/149‑1 (MQ=255) cTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGcc < 4:846086/149‑1 (MQ=255) tATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCg > 3:1403153/1‑149 (MQ=255) tATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCg > 4:860872/1‑149 (MQ=255) gAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCg < 3:294370/124‑1 (MQ=255) gAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCg > 4:294370/1‑124 (MQ=255) cGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCACGAAAACTTTGCCGTCTTcc < 2:781399/149‑1 (MQ=255) gATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGGCCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCt < 4:443887/149‑1 (MQ=255) gATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCt < 2:1064684/149‑1 (MQ=255) aTGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATc < 4:1057563/110‑1 (MQ=255) aTGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATc > 3:1057563/1‑110 (MQ=255) tGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCt > 1:72988/1‑147 (MQ=255) tGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCt < 2:72988/147‑1 (MQ=255) gAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAg > 1:147622/1‑120 (MQ=255) gAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAg < 2:147622/120‑1 (MQ=255) gAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACttt > 4:626047/1‑135 (MQ=255) aGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGc < 1:565994/135‑1 (MQ=255) aGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGc > 2:565994/1‑135 (MQ=255) gACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTaaa < 2:1145255/81‑1 (MQ=255) gACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTaaa > 1:1145255/1‑81 (MQ=255) aCAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACaaa < 3:8011/98‑1 (MQ=255) cAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGa < 4:1403153/149‑1 (MQ=255) cAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGa < 1:917840/149‑1 (MQ=255) aaaGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATc > 3:889853/1‑102 (MQ=255) aaaGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGa < 3:740871/104‑1 (MQ=255) aaaGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGa > 4:740871/1‑104 (MQ=255) aaaGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGaa < 1:1265693/113‑1 (MQ=255) aaaGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGat > 2:446330/1‑149 (MQ=255) aaaGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGat < 1:446330/149‑1 (MQ=255) cgcgTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATc < 4:117131/98‑1 (MQ=255) cgcgTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATc > 3:117131/1‑98 (MQ=255) gcgTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTc < 3:984713/149‑1 (MQ=255) gTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACaaa < 1:1023440/101‑1 (MQ=255) gTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACaaa > 2:1023440/1‑101 (MQ=255) cTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCa < 4:910224/147‑1 (MQ=255) tGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGtt < 2:221268/149‑1 (MQ=255) tGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGtt < 2:966186/149‑1 (MQ=255) cccGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCt < 1:363267/149‑1 (MQ=255) ccGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGt < 3:1020120/56‑1 (MQ=255) ccGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTg > 4:89080/1‑149 (MQ=255) atcatTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCtt > 1:786157/1‑116 (MQ=255) atcatTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTg < 4:1422249/120‑1 (MQ=255) atcatTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGa > 3:1233069/1‑127 (MQ=255) atcatTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGa < 4:1233069/127‑1 (MQ=255) atcatTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGt > 2:1335796/1‑149 (MQ=255) atcatTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTCGCTGAAGAAGt < 3:860872/149‑1 (MQ=255) tcatTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCg > 2:304499/1‑89 (MQ=255) tcatTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTc > 4:1041478/1‑149 (MQ=255) atTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAAc > 4:1367318/1‑102 (MQ=255) atTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAAc < 3:1367318/102‑1 (MQ=255) atTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGaagaag < 1:1350327/145‑1 (MQ=255) atTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGaagaag > 2:1350327/1‑145 (MQ=255) atTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCgg > 4:958550/1‑149 (MQ=255) gCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGgcgt < 4:1093159/149‑1 (MQ=255) tGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGa < 2:1425170/119‑1 (MQ=255) tGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGa > 1:1425170/1‑119 (MQ=255) cttCTTCCGCGCCCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGgcgtgcg > 4:783625/3‑149 (MQ=255) ttCTTCCGCGCCCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAg < 4:565192/125‑1 (MQ=255) ttCTTCCGCGCCCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAg > 3:565192/2‑126 (MQ=255) ttCTTCCGCGCCCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGgcgtgcgt > 3:938680/2‑149 (MQ=255) ttCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGGCGTGCGTATg > 1:106243/1‑149 (MQ=255) cgcgGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGGCGTGCGTATGGCTGTTc < 3:1041478/149‑1 (MQ=255) | TTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGGCGTGCGTATGGCTGTTC > NC_000913/4552041‑4552332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |