New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	271054 =	9 (0.070)	4 (0.030) +TTT	4/512	11.6	31.0%	noncoding (514/1221 nt)	IS30	repeat region
	?	NC_000913	4508164 =	NA (NA)					noncoding (516/1221 nt)	IS30	repeat region
Rejected: Coverage evenness skew score above cutoff.

ATCGATATTTCGGGAACGTTCGTGAATTGGTGTTCCGTTCACTATGTTAATCGTACCTCTTTCGCCTTTGCGGGTATGACGCCTGCCATGGCGAAGGCTATGCGACCGTCGCAGATGCTGTATATTCAGGTGGTGTAGCGCTTCACGGCTACGAAAGTACAGCGTTTTATAAATTGTCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAGTAAGCACGGTTTTGGCCTTTTCGCCATTCTGTTGGCTCGGTTATTAGCATCAACAGCTTTGTAATAGCGTCTGCCCCGATTACGCTGAACTTCACGTGAGATCGTCGAAGGACTGCGATTCAGCGCAGTAGCTATCGCACGAATGCTCATTTTGGCTGACAAACCA  >  NC_000913/4507940‑4508411                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                        atggATATTTCTGGAACGTCCGTGAATTGGTGTTCCGTTAACTATTTTAATCTTACCCCTTTCGCCTTTTGGGGTATGACGCCTGCCATGGCGAAGGCTATGCGACCGTCGCAGATGCTGTATATTCAGGTGGTGTAGCGCTTCACGGCTACGAAAGTACAGCGTTTTATAAATTGTCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGaa                                                                                                                                                                                                       <  3:54972/272‑1 (MQ=0)             gggaCGTTGGTGAATGGTGGTTGCGTTGTCTATGTTAATCGTATCTCTTTCGCCTTTACGGGTATGACGCCTGCCATGGCGCAGGCTATGCTACCGTCGCAGATGCTGTATATTCAGGTGGTGTAGCGCTTCACGGCTACGAAAGTACAGCGTTTTATAAATTGTCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCa                                                                                                                                                                                           <  3:477970/272‑1 (MQ=1)                              gttttCCGTTCACTATGTTAAGCGTACCCCTTTCGCCTTTGCGGGTATGACGCCTGCCATGGCGAAGTCTATGCGACCGTCGCAGATGCTGTATATTCAGGTGGTGTAGCGCTTCACGGCTACGAAAGTACAGCGTTTTATAAATTGTCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAg                                                                                                                                                                        <  2:90808/274‑1 (MQ=1)                                      ttaaCTATGTTAATCGTACCTCCTGCGGCTTTGCGGGTATGACGGCTGCCATGGCGAAGGCTATGCGACCGTCGCAGATGCTGTATATTCAGGGGGTGTAGCGCTTCACGGCTACGAAAGTACAGCGTTTTATAAATTGGCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAGTAAGCa                                                                                                                                                                  <  3:425240/272‑1 (MQ=0)                                       tcccTATGTTAATCGTACCTCTTTCGCCTTTGCGGGTATGACGCCTGCCATGGCGAAGGCTATGCGACCGTCGCAGATGCTGTATATTCAGGTGGTGTAGCGCTTCACGGCTACGAAAGTACAGCGTTTTATAAATTGTCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGaa                                                                                                                                                                                                       <  4:130015/234‑1 (MQ=1)                                                                                                 ggtatggtaCCGTCGAGTATGATGTATATTCAGGTGGTGTTGGGTTTCACGGCGACGAAAGTACAGCGTTTTATAAATTGTCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAGTAAGCACGGTTTTGGCCTTTTCGCCATTCTGTTGGCTCGGTTATTAGCATCAACAGCTTTGTAAt                                                                                                       <  3:37389/267‑1 (MQ=1)                                                                                                       cggccGTCGCAGATGCTGTATATTCAGGTGGTGTAGCGCTTCACGGCTACGAAAGTACAGCGTTTTATAAATTGTCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCGTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAGTAAGCACGGTTTTGGCCTTTTCGCCATTCTGTTGGCTCGGTTATTAGCATCAACAGCTTTGTAATAGCGTc                                                                                                 <  3:197692/272‑1 (MQ=1)                                                                                                                                      gtctgggatttaCGGCTACCAAAGTAAAGGAGTTCATAAATTGTCTCAGGGTATTTTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTTATAGTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAGTAAGCACGGTTTTGGCCTTTTCGCCATTCTGTGGGCTCGGTTATTAGCATCAACAGCTTTGTAATAGCGTCTGGCCCGATTACGCTGAACTTCACGTGAGAt                                                                  <  3:580875/264‑1 (MQ=1)                                                                                                                                                     ctacgaagtttgaGCGTTTTTTAAATTGTCTCAGGTGTTATTCTCAGCGTTTTTTGACGTGTTTTTTTTCCCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAGTAAGCACGGTTTTGGCCTTTTCGCCATTCTGTTGGCTCGGTTATTAGCATCAACAGCTTTGTAATAGCGTCTGCCCCGATTACGCTGAACTTCACGTGAGATCGTCGAAGGACTGCGAtt                                                <  4:83653/266‑1 (MQ=1)                                                                                                                                                                               tgttccagtttatatTCGCAGCGTTTTTTGACTTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATTTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAGTAAGCACGGTTTTGGCCTTTTCGCCATTCTGTTGGCTCGGTTATTAGCATCAACAGCTTTGTAATAGCGTCTGCCCCGATTACGCTGAACTTCACGTGAGATCGTCGAAGGACTGCGATTCAGCGCAGTAGCTATCGCACGAATg                       <  2:245248/266‑1 (MQ=0)                                                                                                                                                                                 tcccAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCt                                                                                                                                                                                                 >  3:310194/4‑105 (MQ=1)                                                                                                                                                                                                    agtgttttGACGTGTTTTTTTTCGCCTTAACCATCCTGATAGTTTCTTTGGAGACAATTTCCTCTCCAGCTTTTCCAGTACAATCTTTCGCTAGTGTAAATTTTGATCCAGTAAGCACGGTTTTGGCTGTTTCGCCATTCTGTTGGCTCGGTTATTAGCATCAACAGCTTTGTAATAGCGTCTGCCCCGATTACGCTGAACTTCACGTGAGATCGTCGAAGGACTGCGATTCAGCGCAGTAGCTATCGCACGAATGCTCATTTTGGCTGACAAACCa  <  4:405892/273‑1 (MQ=1)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                        ATCGATATTTCGGGAACGTTCGTGAATTGGTGTTCCGTTCACTATGTTAATCGTACCTCTTTCGCCTTTGCGGGTATGACGCCTGCCATGGCGAAGGCTATGCGACCGTCGCAGATGCTGTATATTCAGGTGGTGTAGCGCTTCACGGCTACGAAAGTACAGCGTTTTATAAATTGTCTCAGGTGATATTCGCAGCGTTTTTTGACGTGGTTTTGTTCGCCTTAACCATCCTGATATTTGCTCTGGAGACCATTTCATCTCCAGCTTTTCCAGAACAAGCTTTCGCAATGGTAAATTTTGATCCAGTAAGCACGGTTTTGGCCTTTTCGCCATTCTGTTGGCTCGGTTATTAGCATCAACAGCTTTGTAATAGCGTCTGCCCCGATTACGCTGAACTTCACGTGAGATCGTCGAAGGACTGCGATTCAGCGCAGTAGCTATCGCACGAATGCTCATTTTGGCTGACAAACCA  >  NC_000913/4507940‑4508411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.