New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 113048580 (1.060)5 (0.070) 4/248 NT 6.2% coding (379/660 nt) flgA assembly protein for flagellar basal‑body periplasmic P ring
?NC_000913 = 1130504 75 (1.040)coding (360/660 nt) flgA assembly protein for flagellar basal‑body periplasmic P ring

Only 100 of 103 total aligned reads displayed.

CATCACCGCTGGCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTCGTTACCGCAGCGTGC  >  NC_000913/1130338‑1130632
                                                                                                                                                   |                                                                                                                                                   
cATCACCGCTGGCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGt                                                                                                                                                    <  3:483360/149‑1 (MQ=255)
 aTCACCGCTGGCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTg                                                                                                                                                   <  4:417143/149‑1 (MQ=255)
  tCACCGCTGGCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTGGATTGATATCCAGCACCGTACGCGGTgg                                                                                                                                                  >  3:54312/1‑149 (MQ=255)
    aCCGCTGGCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCa                                                                                                                                                <  1:260625/149‑1 (MQ=255)
      cGCTGGCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAgg                                                                                                                                              <  4:245358/149‑1 (MQ=255)
         tGGCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTa                                                                                                                                           <  3:648545/149‑1 (MQ=255)
           gCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATc                                                                                                                                         <  1:439628/149‑1 (MQ=255)
            cGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATcc                                                                                                                                        <  2:677710/149‑1 (MQ=255)
             gATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCa                                                                                                                                       <  4:351603/149‑1 (MQ=255)
               tCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGc                                                                                                                                     >  2:448271/1‑149 (MQ=255)
                cacaTTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGcc                                                                                                                                    <  3:682313/149‑1 (MQ=255)
                    ttGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTcc                                                                                                                                <  1:123764‑M2/149‑3 (MQ=255)
                    ttGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTcc                                                                                                                                <  3:539967‑M2/149‑3 (MQ=255)
                     tGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTccg                                                                                                                               >  2:18777‑M2/1‑146 (MQ=255)
                      gACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGacggctggataccctgccaccgc                                                                                                                              <  2:380114‑M1/149‑24 (MQ=255)
                              gTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGt                                                                                                                      <  2:659813/149‑1 (MQ=255)
                               tCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGtt                                                                                                                           >  3:498620/1‑143 (MQ=255)
                               tCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGtt                                                                                                                           <  4:498620/143‑1 (MQ=255)
                               tCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGtt                                                                                                                     <  2:360519/149‑1 (MQ=255)
                                 ccGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTg                                                                                                                   >  3:10849/1‑149 (MQ=255)
                                 acGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTg                                                                                                                   >  4:201481/2‑149 (MQ=255)
                                  cGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGa                                                                                                                  >  3:530704/1‑149 (MQ=255)
                                  cGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGa                                                                                                                  <  3:258901/149‑1 (MQ=255)
                                  cGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGa                                                                                                                  >  1:675603/1‑149 (MQ=255)
                                  cGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGa                                                                                                                  <  4:530704/149‑1 (MQ=255)
                                   gCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGAc                                                                                                                 >  3:349797/1‑149 (MQ=255)
                                    cTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAg                                                                                                                       >  3:94354/1‑142 (MQ=255)
                                     ttttACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTAt                                                                                                                                          <  3:638077/122‑1 (MQ=255)
                                     ttttACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTAt                                                                                                                                          >  4:638077/1‑122 (MQ=255)
                                        tACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGc                                                                                                            >  2:485571/1‑149 (MQ=255)
                                        tACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGc                                                                                                            >  4:114757/1‑149 (MQ=255)
                                         aCCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGcc                                                                                                           <  1:513221/149‑1 (MQ=255)
                                          cccGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGcca                                                                                                          <  4:539967/149‑1 (MQ=255)
                                                  gCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGccagcttccag                                                                                                  >  1:338518/1‑149 (MQ=255)
                                                    cTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCATCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGccagcttccagct                                                                                                <  4:554050/149‑1 (MQ=255)
                                                        cGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTtcc                                                                                            <  4:54312/149‑1 (MQ=255)
                                                        cGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTtcc                                                                                            <  4:349797/149‑1 (MQ=255)
                                                         gAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGacggctggataccctgccaccgcgtacg                                                                                                                         <  4:53993‑M1/119‑29 (MQ=255)
                                                         gAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGacggctggataccctgccaccgcgtacg                                                                                                                         >  3:53993‑M1/1‑91 (MQ=255)
                                                           aaCTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTtcctcc                                                                                         <  1:240714/149‑1 (MQ=255)
                                                            aCTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTccc                                                                                        >  1:402670/1‑149 (MQ=255)
                                                                  ttAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCa                                                                                  >  3:597963/1‑149 (MQ=255)
                                                                    aaCTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAAt                                                                                <  3:172638/149‑1 (MQ=255)
                                                                    aaCTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAAt                                                                                >  1:234712/1‑149 (MQ=255)
                                                                     aCTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATg                                                                               <  4:326830/149‑1 (MQ=255)
                                                                     aCTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATg                                                                               >  3:547483/1‑149 (MQ=255)
                                                                          aTAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCAt                                                                          >  4:246067/1‑149 (MQ=255)
                                                                              gTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGacggctggataccctgccaccgc                                                                                                                              >  1:334356‑M1/1‑70 (MQ=255)
                                                                              gTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGacggctggataccctgccaccgc                                                                                                                              <  2:334356‑M1/93‑24 (MQ=255)
                                                                              gTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATcgcg                                                                      >  1:542551/1‑149 (MQ=255)
                                                                               ttGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGccagcttcca                                                                                                   >  4:371999/1‑119 (MQ=255)
                                                                               ttGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGccagcttcca                                                                                                   <  3:371999/119‑1 (MQ=255)
                                                                                   tCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAAc                                                                 <  4:29601/149‑1 (MQ=255)
                                                                                    cGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAg                                                                                                                                               <  1:485167/70‑1 (MQ=255)
                                                                                              aTCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTc                                                      <  4:54229/149‑1 (MQ=255)
                                                                                               tCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTcc                                                     <  1:485571/149‑1 (MQ=255)
                                                                                               tCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTcc                                                     >  4:248924/1‑149 (MQ=255)
                                                                                               tCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTcc                                                     >  4:530255/1‑149 (MQ=255)
                                                                                                 gcgcAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTtcc                                                                                            <  1:616750/108‑1 (MQ=255)
                                                                                                 gcgcAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTtcc                                                                                            >  2:616750/1‑108 (MQ=255)
                                                                                                     aGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGc                                               <  2:402670/149‑1 (MQ=255)
                                                                                                       gCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCt                                             >  4:502429/1‑149 (MQ=255)
                                                                                                        cTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTg                                            <  1:448271/149‑1 (MQ=255)
                                                                                                         tAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGt                                           >  3:125313/1‑149 (MQ=255)
                                                                                                           aTGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTGGAGATTGCCAGCTACCAGCTTTACTCCCCGCGCAATGGGCATCGCGGTAACCACATAATTTCCTGTGGCCTGTag                                         >  2:498301/1‑148 (MQ=255)
                                                                                                                 tCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAAc                                   <  3:114757/149‑1 (MQ=255)
                                                                                                                 tCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAAc                                   >  1:276787/1‑149 (MQ=255)
                                                                                                                 tCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAAc                                   <  1:643533/149‑1 (MQ=255)
                                                                                                                    acaaGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTg                                >  3:200778/1‑149 (MQ=255)
                                                                                                                    acaaGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTg                                >  4:102648/1‑149 (MQ=255)
                                                                                                                    acaaGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTg                                >  1:142918/1‑149 (MQ=255)
                                                                                                                        gTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAAc                                   >  2:288982/1‑142 (MQ=255)
                                                                                                                        gTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAAc                                   <  1:288982/142‑1 (MQ=255)
                                                                                                                        gTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTaaa                            <  2:675603/149‑1 (MQ=255)
                                                                                                                        gTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTaaa                            <  1:371699/149‑1 (MQ=255)
                                                                                                                            attgatATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAAc                                   >  3:465735/1‑138 (MQ=255)
                                                                                                                            attgatATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAAc                                   <  4:465735/138‑1 (MQ=255)
                                                                                                                            attgatATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATc                        >  4:347/1‑149 (MQ=255)
                                                                                                                             ttgatATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCg                       >  4:342836/1‑149 (MQ=255)
                                                                                                                              tgatATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGt                      <  3:347/149‑1 (MQ=255)
                                                                                                                               gatATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGtt                     >  2:629556/1‑149 (MQ=255)
                                                                                                                                   tCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTc                 <  4:200778/149‑1 (MQ=255)
                                                                                                                                   tCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTc                 <  3:102648/149‑1 (MQ=255)
                                                                                                                                   tCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTc                 <  4:10849/149‑1 (MQ=255)
                                                                                                                                      aGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTtc                                                                                             <  2:668297/70‑1 (MQ=255)
                                                                                                                                      aGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTtc                                                                                             >  1:668297/1‑70 (MQ=255)
                                                                                                                                      aGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTCGtt              >  4:251629/1‑149 (MQ=255)
                                                                                                                                        cACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTCGTTAc            <  4:597963/149‑1 (MQ=255)
                                                                                                                                           cGTACGCGGTGGCAGGGTATCCAGCCGTccgcgtacggtgctggatatcaatcaacttgttgatgccattagcctgcgcgatctatcacccgatcaacctatccagttaacccagtttc                                       <  4:53993‑M2/119‑92 (MQ=255)
                                                                                                                                           cGTACGCGGTGGCAGGGTATCCAGCCGTccgcgtacggtgctggatatcaatcaacttgttgatgccattagcctgcgcgatctatcacccgatcaacctatccagttaacccagtttc                                       >  3:53993‑M2/1‑28 (MQ=255)
                                                                                                                                              aCGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTCGTTACCGCAGc      <  2:459098/149‑1 (MQ=255)
                                                                                                                                                gcgGTGGCAGGGTATCCAGCCGTccgcgtacggtgctggatatcaatcaacttgttgatgccattagcctgcgcgatctatcacccgatcaacctatccagttaacccagtttcgccaggcatggcgggtaaaagcgggacaacgcgtc    <  2:380114‑M2/149‑127 (MQ=255)
                                                                                                                                                gcgGTGGCAGGGTATCCAGCCGTccgcgtacggtgctggatatcaatcaacttgttgatgccattagcctgcgcgatctatcacccgatcaac                                                            >  1:334356‑M2/1‑23 (MQ=255)
                                                                                                                                                gcgGTGGCAGGGTATCCAGCCGTccgcgtacggtgctggatatcaatcaacttgttgatgccattagcctgcgcgatctatcacccgatcaac                                                            <  2:334356‑M2/93‑71 (MQ=255)
                                                                                                                                                gcgGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTCGTTACCGCAGCGt    >  4:167294/1‑149 (MQ=255)
                                                                                                                                                gcgGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTCGTTACCGCAGCGt    <  3:248924/149‑1 (MQ=255)
                                                                                                                                                gcgGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTCGTTACCGCAGCGt    <  4:547483/149‑1 (MQ=255)
                                                                                                                                                 cgGacggctggataccctgccaccgcgtacggtgctggatatcaatcaacttgttgatgccattagcctgcgcgatctatcacccgatcaacctatccagttaacccagtttcgccaggcatggcgggtaaaagcgggacaacgcgtca   >  2:18777‑M1/1‑3 (MQ=255)
                                                                                                                                                  ggacggctggataccctgccaccgcgtacggtgctggatatcaatcaacttgttgatgccattagcctgcgcgatctatcacccgatcaacctatccagttaacccagtttcgccaggcatggcgggtaaaagcgggacaacgcgtcaa  <  3:539967‑M1/149‑148 (MQ=255)
                                                                                                                                                  ggacggctggataccctgccaccgcgtacggtgctggatatcaatcaacttgttgatgccattagcctgcgcgatctatcacccgatcaacctatccagttaacccagtttcgccaggcatggcgggtaaaagcgggacaacgcgtcaa  <  1:123764‑M1/149‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CATCACCGCTGGCGATCACATTGACGCGTTGTCCCGCTTTTACCCGCCATGCCTGGCGAAACTGGGTTAACTGGATAGGTTGATCGGGTGATAGATCGCGCAGGCTAATGGCATCAACAAGTTGATTGATATCCAGCACCGTACGCGGTGGCAGGGTATCCAGCCGTCCGCGTTTCAGTTTGACATTGCCAGCTTCCAGCTTTCCTCCCCGCGCAATGGGCATCGCGGCAACCACATAATTTCCTGTGGCCTGTACATTAACCTGTAAATATCGTTTGTCGTTACCGCAGCGTGC  >  NC_000913/1130338‑1130632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.