| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,568,919 | T→C | 5.8% | intergenic (‑96/+35) | yddW ← / ← gadC | liprotein, glycosyl hydrolase homolog/glutamate:gamma‑aminobutyric acid antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,568,919 | 0 | T | C | 5.8% | 347.7 / 7.6 | 104 | intergenic (‑96/+35) | yddW/gadC | liprotein, glycosyl hydrolase homolog/glutamate:gamma‑aminobutyric acid antiporter |
| Reads supporting (aligned to +/- strand): ref base T (49/49); new base C (3/3); total (52/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.44e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
TATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGACGC > NC_000913/1568773‑1569063 | tATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑At < 2:334043/149‑1 (MQ=255) aTCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATc < 4:196300/149‑1 (MQ=255) cGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGc < 2:284316/149‑1 (MQ=255) cTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGAT‑AATTCATCGCTc < 2:187632/149‑1 (MQ=255) tGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTcc < 3:379832/149‑1 (MQ=255) tcttctAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCTCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGTAGCGATGAATT‑ATCGCTCCCtt < 4:321166/149‑1 (MQ=255) ctAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCt > 1:431337/1‑149 (MQ=255) tAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCTCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCtt > 4:63547/1‑149 (MQ=255) tAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCtt > 2:214088/1‑149 (MQ=255) tAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTc < 3:286322/140‑1 (MQ=255) tAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATAATTC‑ATCGCTc > 4:286322/1‑140 (MQ=255) tCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTtata > 1:625454/1‑149 (MQ=255) gTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAAc < 2:431337/149‑1 (MQ=255) gTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAAc > 3:394695/1‑149 (MQ=255) ttAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAAcc > 2:405844/1‑149 (MQ=255) ttAATTTCTTGTATCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAAcc > 1:604648/1‑149 (MQ=255) tttCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTc > 1:260487/1‑149 (MQ=255) tCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCt > 1:188465/1‑136 (MQ=255) tCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCt < 2:188465/136‑1 (MQ=255) tttCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATg < 1:573629/149‑1 (MQ=255) ttCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATgg > 2:128233/1‑149 (MQ=255) ttCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATgg < 1:128233/149‑1 (MQ=255) cGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGtt > 3:330626/1‑149 (MQ=255) ggAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAg < 4:294803/149‑1 (MQ=255) gAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAgt < 2:625454/149‑1 (MQ=255) gCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAgtgt > 2:541555/1‑149 (MQ=255) aGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGttt > 2:621861/1‑149 (MQ=255) gATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCCATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTc < 4:411033/149‑1 (MQ=255) atatCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCt < 3:93158/149‑1 (MQ=255) tatCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCtt < 2:509085/149‑1 (MQ=255) atCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTg < 1:214088/149‑1 (MQ=255) tCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGt > 4:175821/1‑149 (MQ=255) tCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGt > 2:8292/1‑149 (MQ=255) tCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGt < 4:394695/149‑1 (MQ=255) tCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGt > 4:437833/1‑149 (MQ=255) cATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtca < 3:553863/149‑1 (MQ=255) cATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtca > 4:2220/1‑149 (MQ=255) cATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtca < 3:170930/149‑1 (MQ=255) atatGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTc < 1:407581/124‑1 (MQ=255) atatGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTc > 2:407581/1‑124 (MQ=255) atatGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTAGAACCATTCAGACATGGTTAGTGTTTCTTGtcat > 4:607283/1‑149 (MQ=255) atGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtcattc > 3:32505/1‑149 (MQ=255) tgtgCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtcattca < 4:330626/149‑1 (MQ=255) tGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATcaca > 1:300109/1‑149 (MQ=255) gTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAat > 3:113518/1‑149 (MQ=255) ccGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtcattc > 1:156449/1‑137 (MQ=255) ccGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGtcattc < 2:156449/137‑1 (MQ=255) cGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAgt < 4:375541/149‑1 (MQ=255) aaCAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTgtggt < 3:437833/149‑1 (MQ=255) tgtgCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTCGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGt < 1:201405/149‑1 (MQ=255) tgtgCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGt < 1:621861/149‑1 (MQ=255) tgCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGc > 2:38137/1‑149 (MQ=255) cgcTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCAc > 3:558166/1‑149 (MQ=255) gcTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCAcg > 3:672839/1‑149 (MQ=255) cTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAgtgt > 3:527349/1‑107 (MQ=255) cTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAgtgt < 4:527349/107‑1 (MQ=255) tcGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCa > 4:5732/1‑149 (MQ=255) gTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAgtg > 2:115183/1‑124 (MQ=255) gTACTTATCCCCGTTAAGTAAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAgtg < 1:115183/124‑1 (MQ=255) tACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCa < 2:644320/83‑1 (MQ=255) tACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCa > 1:644320/1‑83 (MQ=255) tATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGgaagaa < 3:5732/149‑1 (MQ=255) tCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGt < 3:456897/149‑1 (MQ=255) ccccGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTg > 3:250467/1‑149 (MQ=255) cccGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGa < 3:155669/149‑1 (MQ=255) gTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTgtggt > 3:34088/1‑116 (MQ=255) gTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTgtggt < 4:34088/116‑1 (MQ=255) gTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCt > 3:466841/1‑149 (MQ=255) aaGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCtttt < 1:38137/149‑1 (MQ=255) gTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTgg > 3:309618/1‑149 (MQ=255) tCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATGGTTCCCTGGTCTTATAGCCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACTTGCGCGCGGGTGCAGGAAGCAGTGACCTTTTAGt > 4:426521/1‑149 (MQ=255) aaTACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGc > 1:300868/1‑149 (MQ=255) aaTACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGc < 4:466841/149‑1 (MQ=255) aTACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCg < 4:32505/149‑1 (MQ=255) tACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGt > 1:356520/1‑149 (MQ=255) aCGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGtt < 3:2220/149‑1 (MQ=255) gACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCt > 3:371380/1‑149 (MQ=255) gACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCt < 4:12937/149‑1 (MQ=255) cAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGa < 4:672839/149‑1 (MQ=255) agcaCGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGtt < 1:94325/149‑1 (MQ=255) caCGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGa < 1:541555/149‑1 (MQ=255) caCGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACAGTTGa < 2:260487/149‑1 (MQ=255) aCGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGAt < 1:8292/149‑1 (MQ=255) aCGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGAt < 4:371380/149‑1 (MQ=255) cGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGAtt < 3:691184/149‑1 (MQ=255) gacaaGGGAGCGATAATTC‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTgg > 4:188792/4‑149 (MQ=255) aaaaaGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTgg < 3:63547/149‑1 (MQ=255) aaaaaGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTgg > 1:81949/1‑149 (MQ=255) aaGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTc < 2:604648/149‑1 (MQ=255) gggAGCGATAATTC‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCa > 4:170853/1‑149 (MQ=255) ggAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCag > 1:383014/1‑149 (MQ=255) gAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCaga > 1:633239/1‑149 (MQ=255) gAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCaga > 1:540166/1‑149 (MQ=255) gATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGa > 2:179125/1‑149 (MQ=255) gATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGa < 2:300868/149‑1 (MQ=255) aTGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGAc > 2:427967/1‑149 (MQ=255) aTGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTCGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGAc > 1:495593/1‑149 (MQ=255) gAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGACGc < 4:309618/149‑1 (MQ=255) aTT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGAc > 4:368846/1‑123 (MQ=255) aTT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGAc < 3:368846/123‑1 (MQ=255) | TATCGCTGGTCTTCTAATCGTTAATTTCTTGTTTCGGGAGCAGATATCCATATGTGCTGGTTTCCGGTAAACAGATGTGCGCTCATTCTCGTACTTATCCCCGTTAAGTCAATACGACAGCAAGCACGAAAAAGGGAGCGATGAATT‑ATCGCTCCCTTGTCTTATAACCATTCAGACATGGTTAGTGTTTCTTGTCATTCATCACAATATAGTGTGGTGAACGTGCACGCGGGTGCAGGAAGAAGTGACCTTTTGGTGCGTTCTGACTGTTGATTGGCTCCAGAGTGACGC > NC_000913/1568773‑1569063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |