| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3148949 = | 88 (0.890) | 6 (0.060) | 5/248 | NT | 6.7% | intergenic (+12/+28) | gpr/yqhA | L‑glyceraldehyde 3‑phosphate reductase/UPF0114 family putative inner membrane protein |
| ? | NC_000913 | 3148970 = | 84 (0.900) | intergenic (+33/+7) | gpr/yqhA | L‑glyceraldehyde 3‑phosphate reductase/UPF0114 family putative inner membrane protein | |||||
GCGTCTTTATGGATGCGAAAAATGTCCCGGATAACAAACTGATGTGGTACGTCATTATCCATCTGACGTTTGTGCTTTCTGCATTTGTGATGGGCTATCTTGACCGACTGACTCGTCATAATCACTGATCTGATTCGGGCGCGGTTCGCGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3149104‑3148949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcccgAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATCCATAAAGACGCGCAGTAAGTGAA > NC_000913/3148970‑3149116 GCGTCTTTATGGATGCGAAAAATGTCCCGGATAACAAACTGATGTGGTACGTCATTATCCATCTGACGTTTGTGCTTTCTGCATTTGTGATGGGCTATCTTGACCGACTGACTCGTCATAATCACTGATCTGATTCGGGCGCGGTTCGC < 1:725258/149‑1 TCTTTATGGATGCGAAAAATGTCCCGGATAACAAACTGATGTGGTACGTCATTATCCATCTGACGTTTGTGCTTTCTGCATTTGTGATGGGCTATCTTGACCGACTGACTCGTCATAATCACTGATCTGATTCGGGCGCGGTTCGCGCG < 2:302964/149‑1 ATTCGGGCGCGGTTCGCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATG < 1:429052/78‑1 ATTCGGGCGCGGTTCGCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATG > 2:429052/1‑78 TCGGGCGCGGTTCGCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCC > 4:581426/1‑65 TCGGGCGCGGTTCGCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAG < 3:543479/59‑1 TCGGGCGCGGTTCGCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAG > 4:543479/1‑59 TCGGGCGCGGTTCGCGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGATCAAGATAGCC < 3:581426/65‑1 CGCGCCCGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATCCATAAAGACGCGCAGTA > 4:163542/1‑149 CGCCCGAATCAGATCAGTGATTCTGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTACCCGGGACATTTTTCGCATCCATAAAGACGCGCAGTAAG < 4:727250/149‑1 CGAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATCCATAAAGACGCGCAGTAAGTGAA < 4:797369/149‑1 GCGTCTTTATGGATGCGAAAAATGTCCCGGATAACAAACTGATGTGGTACGTCATTATCCATCTGACGTTTGTGCTTTCTGCATTTGTGATGGGCTATCTTGACCGACTGACTCGTCATAATCACTGATCTGATTCGGGCGCGGTTCGCGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3149104‑3148949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcccgAATCAGATCAGTGATTATGACGAGTCAGTCGGTCAAGATAGCCCATCACAAATGCAGAAAGCACAAACGTCAGATGGATAATGACGTACCACATCAGTTTGTTATCCGGGACATTTTTCGCATCCATAAAGACGCGCAGTAAGTGAA > NC_000913/3148970‑3149116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |