| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,318,080 | A→T | 6.1% | intergenic (‑74/+133) | rimP ← / ← metY | ribosome maturation factor for 30S subunits/tRNA‑Met |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,318,080 | 0 | A | T | 6.1% | 433.7 / 12.5 | 127 | intergenic (‑74/+133) | rimP/metY | ribosome maturation factor for 30S subunits/tRNA‑Met |
| Reads supporting (aligned to +/- strand): ref base A (69/50); new base T (5/3); total (74/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.56e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
CCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCC > NC_000913/3317937‑3318226 | ccAGTTCAAACCCCAGGGCCTCAACTCGCGCAGTAATCACCTCTGTTAATTTTCGCTCTAATTTGAACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAATCCCAGTTATTCTGTAATCAGATAAC‑AAAAAACCCCGATAAACCgg < 4:781679/149‑1 (MQ=255) aGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCCTCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCCCCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAACAAAAAAACCCCGATAAATCggg < 3:792912/149‑1 (MQ=255) ttCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCt > 4:526265/1‑149 (MQ=255) ttCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCt < 1:670161/149‑1 (MQ=255) tcgaaaCCTAGGGCGTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGCGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCtt < 4:543558/146‑1 (MQ=255) tCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATTTATCGGGGttt < 2:548715/149‑1 (MQ=255) aaaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTta > 2:158918/1‑149 (MQ=255) aaaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTta < 3:489126/149‑1 (MQ=255) aaaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATTTATCGGGGtttttt < 2:364644/149‑3 (MQ=255) aaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTtata > 3:633123/1‑149 (MQ=255) aaCCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTtata > 2:110994/1‑149 (MQ=255) cAGGGCCCCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAAc < 1:110994/149‑1 (MQ=255) aaCTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATaa > 1:700596/1‑122 (MQ=255) aaCTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCta < 4:699818/149‑1 (MQ=255) aaCTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAAAGTGGACAAGCCCACCCCCAAAACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATaa < 2:700596/122‑1 (MQ=255) cTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCtata > 4:40265/1‑149 (MQ=255) tGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATaa > 2:678790/1‑149 (MQ=255) gcgcAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAAcc < 1:633582/149‑1 (MQ=255) aGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCaa < 2:676922/149‑1 (MQ=255) tAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACt > 3:835158/1‑149 (MQ=255) aaTCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATaa < 2:892788/127‑1 (MQ=255) tcatcTCTGTTAATTTTTTCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCg < 1:51700/149‑1 (MQ=255) taatcTCTGTTAATTTATGCTCTAATGTGGACAAGCCCACCCCCAATACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCTATAAATCGGGGCTTTATATAACTGAACCCTAGAACCGCAACTGCg < 2:434221/147‑1 (MQ=255) atcTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGt > 1:755989/1‑149 (MQ=255) tctcTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTc > 3:843183/1‑149 (MQ=255) ctctGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCt < 3:273812/149‑1 (MQ=255) ctctGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCt < 1:156025/149‑1 (MQ=255) tGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGa < 1:566535/149‑1 (MQ=255) ttAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGc < 3:400792/149‑1 (MQ=255) ttAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGc > 4:289783/1‑149 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATTTATCGGGGttt > 4:799869/1‑98 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATTTATCGGGGttt < 3:799869/98‑1 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa > 1:852692/1‑149 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa > 1:437454/1‑149 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa > 2:306108/1‑149 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa > 2:121828/1‑149 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa < 4:14499/149‑1 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa > 1:74446/1‑149 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGaa < 3:368301/149‑1 (MQ=255) tctAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCGTTATATAACTGAACCCTATAACCGCAACTTCGGTCTGGAGCACTTTCCAGaa > 2:840848/1‑149 (MQ=255) tAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAgg > 4:413478/1‑149 (MQ=255) tgGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGAtttt < 4:471502/149‑1 (MQ=255) tgGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGAtttt < 2:852692/149‑1 (MQ=255) tgGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGAtttt < 3:133055/149‑1 (MQ=255) gACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAAc > 4:308361/1‑116 (MQ=255) gACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAAc < 3:308361/116‑1 (MQ=255) gACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGAtttttt > 2:447017/1‑149 (MQ=255) gCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTGATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAAt > 4:568537/1‑149 (MQ=255) ccACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATcc > 3:258432/1‑149 (MQ=255) ccACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATcc > 3:332591/1‑149 (MQ=255) aCCCACAAGACATACAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCa < 3:247045/149‑1 (MQ=255) cccAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTa > 2:603547/1‑149 (MQ=255) ccAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTAc > 2:793435/1‑149 (MQ=255) aGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTc < 2:138653/134‑1 (MQ=255) gACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAg < 4:130217/149‑1 (MQ=255) aTAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGcc < 2:621362/149‑1 (MQ=255) aTAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGcc > 1:858335/1‑149 (MQ=255) aaaaaaaGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGa > 4:689837/1‑149 (MQ=255) aaaaaaGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGaa < 2:193344/149‑1 (MQ=255) aaaGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTc > 4:279789/1‑149 (MQ=255) gggCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTc > 1:651192/1‑149 (MQ=255) ggCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTca > 4:367700/1‑149 (MQ=255) cTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAg > 4:193123/1‑149 (MQ=255) cTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAg > 1:86385/1‑149 (MQ=255) ctaGTAATTCCGTCGTCAGATGAC‑AGAAAGTTCCGATAAATCTGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGACTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATAttt > 2:168382/3‑149 (MQ=255) ccAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATAttt > 1:272902/1‑149 (MQ=255) ccAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATAttt < 1:133560/149‑1 (MQ=255) cAGGTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATTACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTg > 1:826419/1‑149 (MQ=255) aGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGa < 1:362380/149‑1 (MQ=255) aTTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGaaaaa < 3:689837/149‑1 (MQ=255) ttCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAg < 3:526265/149‑1 (MQ=255) ttCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAg > 2:48825/1‑149 (MQ=255) ttCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTCAAACCTATAACCGCAACTGTGGTCTGGAGCACTTTCCAGAAAGATTTTTTCAAATCCCACTAGGAAGGCCGAAGTGTTCACAGTATATTTGgaatgg > 2:608027/1‑146 (MQ=255) tCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAgg < 2:651192/149‑1 (MQ=255) tGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTca > 1:169592/1‑129 (MQ=255) tGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGAc > 3:464005/1‑149 (MQ=255) gTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGA‑TTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGActc < 4:6528/149‑1 (MQ=255) tCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTaa > 2:202929/1‑149 (MQ=255) tCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTaa > 3:315298/1‑149 (MQ=255) aGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAgg > 3:866770/1‑149 (MQ=255) tAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGaa < 1:121828/149‑1 (MQ=255) ttatataaagCCCCGATTTATCGGGGTTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGaa > 2:677006/7‑149 (MQ=255) gtatataaagCCCCGATTTATCGGGGTTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGaa > 4:761879/7‑149 (MQ=255) aaC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGaaa > 3:306199/1‑149 (MQ=255) aaC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGaaa > 1:16457/1‑149 (MQ=255) aaC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGaaa < 4:315298/149‑1 (MQ=255) aaC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGaaa > 3:808032/1‑149 (MQ=255) aaaaaaCCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTg > 3:394889/1‑149 (MQ=255) aaaaaaCCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTg < 1:48825/149‑1 (MQ=255) aaaaaaCCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTg > 2:244944/1‑149 (MQ=255) aaagCCCCGATTTATCGGGGTTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGt > 2:341265/1‑149 (MQ=255) aagccccGATTTATCGGGGTTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGtt > 3:581582/4‑149 (MQ=255) cccGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTaa < 2:136239/133‑1 (MQ=255) cccGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTaa > 1:136239/1‑133 (MQ=255) cccGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCgg > 2:699778/1‑149 (MQ=255) ccGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCggg < 4:107578/149‑1 (MQ=255) cGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCgggg > 3:712361/1‑149 (MQ=255) gATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCggggg > 1:197622/1‑149 (MQ=255) aTAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGc > 1:99959/1‑149 (MQ=255) tAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGcc < 1:202929/149‑1 (MQ=255) | CCAGTTCAAAACCCAGGGCCTCAACTGGCGCAGTAATCATCTCTGTTAATTTTTGCTCTAATGTGGACAAGCCCACCCCCAAGACATAAAAAAAGGGCCTAAAGCCCAGTTATTCTGTAGTCAGATAAC‑AAAAAACCCCGATAAATCGGGGCTTTATATAACTGAACCCTATAACCGCAACTGCGGTCTGGAGCACTTTCCAGAAGGATTTTTTCAAATCCCACTACGAAGGCCGAAGTCTTCACAGTATATTTGAAAAAGGACTCTAAGGGAAAGTGGTTGCGGGGGCC > NC_000913/3317937‑3318226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |