New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 60104449 (0.580)3 (0.040) 3/246 NT 6.1% coding (2331/3144 nt) cusA copper/silver efflux system, membrane component
?NC_000913 = 601061 47 (0.590)coding (2348/3144 nt) cusA copper/silver efflux system, membrane component

TTAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGATTTATATCG  >  NC_000913/600896‑601192
                                                                                                                                                    |                                                                                                                                                    
ttAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGC                                                                                                                                                      <  2:386084‑M1/149‑1 (MQ=255)
   aCCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGAt                                                                                                                                                   <  1:395131/149‑1 (MQ=255)
    ccGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATa                                                                                                                                                  <  2:19019/149‑1 (MQ=255)
           aaaGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCa                                                                                                                                           <  3:234512/149‑1 (MQ=255)
               ccGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGTGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTGTCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCa                                                                                                                                       <  1:387514/149‑1 (MQ=255)
                  cACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTg                                                                                                                                    <  1:653248‑M2/149‑2 (MQ=255)
                   aCGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGATGGCGCGATAGTCCGCAGGCACTgc                                                                                                                                   >  1:600780‑M2/1‑147 (MQ=255)
                     gTTACGGTATGGCGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGAGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgc                                                                                                                                 <  4:438005‑M2/149‑5 (MQ=255)
                     gTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgc                                                                                                                                 >  3:695680‑M2/1‑145 (MQ=255)
                             aTGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGcc                                                                                                                         >  3:361917/1‑149 (MQ=255)
                             aTGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGcc                                                                                                                         <  1:53575/149‑1 (MQ=255)
                              tGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTCGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCagtacctgcggactatcgcgccagctttgc                                                                                                                        <  4:647953‑M1/149‑31 (MQ=255)
                               gACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGa                                                                                                                       <  4:88266/149‑1 (MQ=255)
                                 cGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGTATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTTCGCAGGCACTGCGCCAGCTGCCGATc                                                                                                                     <  2:447034/149‑1 (MQ=255)
                                               cAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGaa                                                                                                       >  1:27549/1‑149 (MQ=255)
                                                   tgtttgtGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagcag                                                                                                   <  2:663927/149‑1 (MQ=255)
                                                    gtttgtGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagcagc                                                                                                  >  3:261080/1‑149 (MQ=255)
                                                          gACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCagtgcctgcggactatcgcgcca                                                                                                                               >  2:695185‑M1/1‑91 (MQ=255)
                                                          gACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCagtgcctgcggactatcgcgcca                                                                                                                               <  1:695185‑M1/114‑24 (MQ=255)
                                                          gACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCa                                                                                            <  2:135791/149‑1 (MQ=255)
                                                             ttCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGc                                                                                                              <  1:135345/128‑1 (MQ=255)
                                                             ttCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGc                                                                                                              >  2:135345/1‑128 (MQ=255)
                                                             ttCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCaaa                                                                                               >  2:664217/1‑143 (MQ=255)
                                                             ttCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCaaa                                                                                               <  1:664217/143‑1 (MQ=255)
                                                             ttCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCAccc                                                                                         >  2:97854/1‑149 (MQ=255)
                                                                          ggggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGc                                                                            >  1:339488/1‑149 (MQ=255)
                                                                               gATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACa                                                                       >  1:170823/1‑149 (MQ=255)
                                                                                    ttGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTata                                                                  >  3:618178/1‑147 (MQ=255)
                                                                                    ttGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTaaa                                                                  <  1:706989/149‑1 (MQ=255)
                                                                                         gAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCaaa                                                                                               >  4:753265/1‑115 (MQ=255)
                                                                                         gAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCaaa                                                                                               <  3:753265/115‑1 (MQ=255)
                                                                                         gAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGtctc                                                             >  2:605458/1‑149 (MQ=255)
                                                                                         gAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGtctc                                                             <  2:170823/149‑1 (MQ=255)
                                                                                                     gggATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTc                                                 >  4:576485/1‑149 (MQ=255)
                                                                                                       gATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGa                                               >  4:734466/1‑149 (MQ=255)
                                                                                                        aTTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAgg                                                                                                                                         >  2:313887/1‑58 (MQ=255)
                                                                                                        aTTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAgg                                                                                                                                         <  1:313887/58‑1 (MQ=255)
                                                                                                             ccGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGa                                         >  2:326437/1‑149 (MQ=255)
                                                                                                             ccGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGa                                         >  4:25205/1‑149 (MQ=255)
                                                                                                               gTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGaaa                                       >  1:115179/1‑149 (MQ=255)
                                                                                                                  aTCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAAcc                                    >  1:271100/1‑149 (MQ=255)
                                                                                                                  aTCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAAcc                                    >  1:546093/1‑149 (MQ=255)
                                                                                                                      aaTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAAc                                     >  3:680431/1‑144 (MQ=255)
                                                                                                                      aaTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAAc                                     <  4:680431/144‑1 (MQ=255)
                                                                                                                      aaTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCgaga                                >  2:76256/1‑149 (MQ=255)
                                                                                                                      aaTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCgaga                                <  3:259674/149‑1 (MQ=255)
                                                                                                                       aTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGaa                               >  4:524359/1‑149 (MQ=255)
                                                                                                                          aaTCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATgc                            <  2:127274/149‑1 (MQ=255)
                                                                                                                          aaTCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATgc                            <  4:361917/149‑1 (MQ=255)
                                                                                                                            tCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAAGCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGGATgcgc                          <  2:277060/149‑1 (MQ=255)
                                                                                                                              tGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATgcgcgc                        >  3:627975/1‑149 (MQ=255)
                                                                                                                              tGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATgcgcgc                        >  4:66780/1‑149 (MQ=255)
                                                                                                                                  ttATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCcga                    >  4:57158/1‑149 (MQ=255)
                                                                                                                                     tCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCcgacga                 >  4:474445/1‑149 (MQ=255)
                                                                                                                                        gCAAAGCTGGCGCGATAGTCCGCAGGTACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttcgaccgtttcgccaaccatcgccccgcccaccgcagaagtcacaaacaactgcacatccgccaccgtca              <  4:647953‑M2/149‑120 (MQ=255)
                                                                                                                                        gCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCt              >  4:38808/1‑149 (MQ=255)
                                                                                                                                        gCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCt              >  3:702933/1‑149 (MQ=255)
                                                                                                                                        gCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCt              >  1:381624/1‑149 (MQ=255)
                                                                                                                                         cAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTg             <  4:92904/149‑1 (MQ=255)
                                                                                                                                            aGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAACAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGAt          <  1:605458/149‑1 (MQ=255)
                                                                                                                                               tGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccccgcccaccgcagaagtc                                          >  2:695185‑M2/1‑23 (MQ=255)
                                                                                                                                               tGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccccgcccaccgcagaagtc                                          <  1:695185‑M2/114‑92 (MQ=255)
                                                                                                                                                 gcgcagtgcctgcggactatcgcgccagctttgcggataacgcagattaattggataacgggcaatcccttcctccgtttcgccaaccatcgccccgcccaccgcagaagtcacaaacaactgcacatccgccaccgccataccgtaac     <  4:438005‑M1/149‑146 (MQ=255)
                                                                                                                                                 gcgcagtgcctgcggactatcgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccccgcccaccgcagaagtcacaaacaactgcacatccgccaccgtcataccgtaac     >  3:695680‑M1/1‑4 (MQ=255)
                                                                                                                                                  cgcgATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGATTTatat    <  2:356550/149‑1 (MQ=255)
                                                                                                                                                   gcagtgcctgcggactatcgcgccatctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccccgcccaccgcagaagtcacaaacaactgcacatccgccaccgtcataccgtaacgt   >  1:600780‑M1/1‑2 (MQ=255)
                                                                                                                                                    cagtgcctgcggactatcgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccccgcccaccgcagaagtcacaaacaactgcacatccgccaccgtcataccgtaacgtg  <  1:653248‑M1/149‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TTAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGATTTATATCG  >  NC_000913/600896‑601192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.