New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3721045 =126 (1.480)234 (2.770) 130/262 NT 68.0% noncoding (413/1443 nt) IS150 repeat region
?NC_000913 = 3839774 95 (1.120)coding (220/819 nt) nlpA cytoplasmic membrane lipoprotein‑28

Only 100 of 366 total aligned reads displayed.

TGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTC  >  NC_000913/3839627‑3839921
                                                                                                                                                   |                                                                                                                                                   
  aTTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcat                                                                                                                                                  <  3:652720‑M2/149‑4 (MQ=255)
  aTTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcat                                                                                                                                                  <  4:149515‑M2/149‑4 (MQ=255)
   tttttttGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcatt                                                                                                                                                 >  2:133405‑M2/1‑145 (MQ=255)
   tttttttGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcatt                                                                                                                                                 >  4:122593‑M2/1‑145 (MQ=255)
   tttttttGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcatt                                                                                                                                                 >  1:241287‑M2/1‑145 (MQ=255)
   tttttttGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcatt                                                                                                                                                 <  1:263220‑M2/149‑5 (MQ=255)
    ttttttGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAAACATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTa                                                                                                                                                <  4:400383/149‑1 (MQ=255)
            aaTAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatca                                                                                                                                        <  1:383678‑M2/149‑14 (MQ=255)
             aTAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcag                                                                                                                                       <  1:339056‑M2/149‑15 (MQ=255)
                 cccGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttga                                                                                                                                   <  3:748876‑M2/149‑19 (MQ=255)
                  ccGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGTGCCTGATTATCTTTTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgat                                                                                                                                  >  1:516533‑M2/1‑130 (MQ=255)
                       aTAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATcc                                                                                                                             >  2:123031/1‑149 (MQ=255)
                        tAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaa                                                                                                                            >  2:725888‑M2/1‑124 (MQ=255)
                               gACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcgg                                                                                                                     <  2:559423‑M2/149‑33 (MQ=255)
                                aCAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTc                                                                                                                    <  4:747089/149‑1 (MQ=255)
                                  aaaCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcat                                                                                                                  <  3:229925‑M2/149‑36 (MQ=255)
                                  aaaCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcat                                                                                                                  <  1:620082‑M2/149‑36 (MQ=255)
                                  aaaCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaa                                                                                                                                             <  4:392214‑M2/122‑9 (MQ=255)
                                  aaaCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaa                                                                                                                                             >  3:392214‑M2/1‑114 (MQ=255)
                                  aaaCGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCaa                                                                                                                  >  1:222621/1‑149 (MQ=255)
                                      gTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagc                                                                                                              <  2:319123‑M2/149‑40 (MQ=255)
                                      gTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagc                                                                                                              <  3:675381‑M2/149‑40 (MQ=255)
                                      gTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagc                                                                                                              <  1:137009‑M2/149‑40 (MQ=255)
                                       tATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagca                                                                                                             <  1:165095‑M2/149‑41 (MQ=255)
                                         tttCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGtt                                                                                                                                                     >  3:109726/1‑107 (MQ=255)
                                         tttCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcatt                                                                                                           <  1:470016‑M2/149‑43 (MQ=255)
                                         tttCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGt                                                                                                                                                 >  3:454958/1‑111 (MQ=255)
                                            cccACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattgga                                                                                                        >  1:363613‑M2/1‑104 (MQ=255)
                                                ccGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctg                                                                                                    <  1:15234‑M2/149‑50 (MQ=255)
                                                 cGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgt                                                                                                   >  3:152851‑M2/1‑99 (MQ=255)
                                                   cTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtca                                                                                                 <  4:660912‑M2/149‑53 (MQ=255)
                                                      ccAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaa                                                                                              >  1:673799‑M2/1‑94 (MQ=255)
                                                         gTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagac                                                                                           <  2:84613‑M2/149‑59 (MQ=255)
                                                            tataACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccga                                                                                        >  1:9116‑M2/1‑88 (MQ=255)
                                                                aCCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgca                                                                                    <  3:432979‑M2/149‑66 (MQ=255)
                                                                aCCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAAcc                                                                                                                                      <  2:590026/99‑1 (MQ=255)
                                                                 ccATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGa                                                                                                            <  4:569690/124‑1 (MQ=255)
                                                                    tGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattga                                                                                <  3:92357‑M2/149‑70 (MQ=255)
                                                                     gcgcCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTa                                                                               <  4:55836/149‑1 (MQ=255)
                                                                       gcCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGc                                                                             >  2:400754/1‑149 (MQ=255)
                                                                        ccTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggat                                                                            >  1:736847‑M2/1‑76 (MQ=255)
                                                                          tGATTATCTTGTTCAAGAAAGGGTCGCTGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatct                                                                          <  2:46537‑M2/149‑76 (MQ=255)
                                                                          tGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatct                                                                          >  4:306851‑M2/1‑74 (MQ=255)
                                                                          tGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgaattgaggatct                                                                          >  3:665870‑M2/1‑74 (MQ=255)
                                                                                tCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaag                                                                    <  2:525902‑M2/149‑82 (MQ=255)
                                                                                  ttGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagactgacgcattgaggatcttgaaaggc                                                                  <  1:643677‑M2/149‑84 (MQ=255)
                                                                                  ttGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggc                                                                  >  1:11258‑M2/1‑66 (MQ=255)
                                                                                  ttGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggc                                                                  <  2:685943‑M2/149‑84 (MQ=255)
                                                                                     ttCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaag                                                               <  3:284624‑M2/149‑87 (MQ=255)
                                                                                     ttCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACAt                                                               >  3:330878/1‑149 (MQ=255)
                                                                                      tCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATc                                                              <  2:279254/149‑1 (MQ=255)
                                                                                        aaGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCtt                                                            >  1:485922/1‑149 (MQ=255)
                                                                                        aaGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCtt                                                            >  3:351182/1‑149 (MQ=255)
                                                                                        aaGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATCAGTTGTCGCATCGTTcattgcaatatcagttgatccagaaagagcggcatcaggattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttc                                                            <  4:466214‑M2/149‑90 (MQ=255)
                                                                                          gAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcga                                                          <  4:249493‑M2/149‑92 (MQ=255)
                                                                                              gggTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttc                                                      >  1:30383‑M2/1‑54 (MQ=255)
                                                                                               ggTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttct                                                     >  1:415568‑M2/1‑53 (MQ=255)
                                                                                               ggTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttct                                                     <  1:600091‑M2/149‑97 (MQ=255)
                                                                                               ggTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGGTCTgc                                                     <  4:440700/149‑1 (MQ=255)
                                                                                                   gATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaa                                                 <  1:190137‑M2/149‑101 (MQ=255)
                                                                                                    aTGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCAt                                                >  2:211340/1‑149 (MQ=255)
                                                                                                       cTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgc                                             >  2:339056‑M2/1‑45 (MQ=255)
                                                                                                        tGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcg                                            <  4:648349‑M2/149‑106 (MQ=255)
                                                                                                        tGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttaatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcg                                            <  2:488335‑M2/149‑106 (MQ=255)
                                                                                                        tGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTtat                                            <  1:203743/149‑1 (MQ=255)
                                                                                                          gAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgtaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggc                                          >  3:403451‑M2/1‑42 (MQ=255)
                                                                                                          gAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggc                                          >  4:329339‑M2/1‑42 (MQ=255)
                                                                                                          gAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATaa                                          >  4:196419/1‑149 (MQ=255)
                                                                                                          gAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATaa                                          >  4:601064/1‑149 (MQ=255)
                                                                                                          gAAGACATTCGCATCAAGTGCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggc                                          <  2:145281‑M2/149‑108 (MQ=255)
                                                                                                                aTTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgt                                    <  4:375779‑M2/149‑114 (MQ=255)
                                                                                                                aTTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCaa                                    <  3:59945/149‑1 (MQ=255)
                                                                                                                 ttCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgta                                   <  3:629198‑M2/149‑115 (MQ=255)
                                                                                                                 ttCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAAc                                   >  4:527157/1‑149 (MQ=255)
                                                                                                                  tCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtat                                  >  2:717393‑M2/1‑34 (MQ=255)
                                                                                                                  tCGCATCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtat                                  >  1:100157‑M2/1‑34 (MQ=255)
                                                                                                                    gCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACttt                                >  2:623515/1‑149 (MQ=255)
                                                                                                                      aTCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgag                                                                               <  4:484533‑M2/100‑71 (MQ=255)
                                                                                                                      aTCAAGTTCGCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgag                                                                               >  3:484533‑M2/1‑30 (MQ=255)
                                                                                                                      aTCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTaa                              >  1:556723/1‑149 (MQ=255)
                                                                                                                      aTCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTaa                              <  4:180100/149‑1 (MQ=255)
                                                                                                                      aTCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTaa                              >  1:404400/1‑149 (MQ=255)
                                                                                                                       tCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAAt                             <  1:332483/149‑1 (MQ=255)
                                                                                                                            ttCGACAAGATTTGTCGCATCGTTcattgcaatatcagttgatccagataaagcggcatcagcattggggctgtcaaaagaccgacgaattgaggaacttgaaaggcaaattcgatttcatgaaacgcggcttatgaatctaaaaaagc                        >  2:61631‑M2/1‑24 (MQ=255)
                                                                                                                               gCCATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctga                     <  4:63533‑M2/149‑129 (MQ=255)
                                                                                                                                ccATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAAt                             <  3:568434/140‑1 (MQ=255)
                                                                                                                                 cATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaa                   >  2:190137‑M2/1‑19 (MQ=255)
                                                                                                                                 cATGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaa                   <  2:413545‑M2/149‑131 (MQ=255)
                                                                                                                                  aTGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaag                  <  2:374333‑M2/149‑132 (MQ=255)
                                                                                                                                  aTGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttct                                                     >  1:567800‑M2/1‑18 (MQ=255)
                                                                                                                                  aTGATTTGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttct                                                     <  2:567800‑M2/114‑97 (MQ=255)
                                                                                                                                   tGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTACCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATc                 <  4:677706/149‑1 (MQ=255)
                                                                                                                                     aTTTGTCGCATCGTGcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagcct               <  3:54205‑M2/149‑135 (MQ=255)
                                                                                                                                       ttGTCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagcctta             >  3:127191‑M2/1‑13 (MQ=255)
                                                                                                                                       ttGTCGCATCGTTcattgcaatatcagttaatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaaggctta             >  2:97090‑M2/1‑13 (MQ=255)
                                                                                                                                        tGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCgctgc            <  3:196419/149‑1 (MQ=255)
                                                                                                                                          tCGCATCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagct          <  4:69074‑M2/149‑140 (MQ=255)
                                                                                                                                              aTCGTTcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatc      >  2:423853‑M2/1‑6 (MQ=255)
                                                                                                                                                 gTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGt   >  1:714963/1‑149 (MQ=255)
                                                                                                                                                  ttcattgcaatatcagttgatccagaaaaagcggcatcagcattggagctgtcaaaagaccgacgcattgaggatcttgaaaggcaagttcgatttcttgaaacgcggcttatgtatctaaaaaagctgaaagccttagctcatcccac  <  3:263328‑M2/149‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TGATTTTTTTGGAATAACCCGCCATAGGGAAGACAAACGTATTTCCCACCGCTACCAGTTTATAACCATGCGCCTGATTATCTTGTTCAAGAAAGGGTCGATGCTGGAAGACATTCGCATCAAGTTCGCCATGATTTGTCGCATCGTTCGGTAGCAACGAACCGCTAAATCCTACCAGTTCAACATCGAGGCCATATTTCTCTTTTGCCACCTTTTTAGCGACTTCCGCGACATCTTGTTCTGCGCCATTTATAACGCCAACTTTAATGTGTTTTGCATCGCTGCTACTCTGGTC  >  NC_000913/3839627‑3839921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.