| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,434,097 | T→C | 5.7% | A215A (GCA→GCG) | dedA ← | DedA family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,434,097 | 0 | T | C | 5.7% | 338.0 / 7.5 | 105 | A215A (GCA→GCG) | dedA | DedA family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (41/58); new base C (3/3); total (44/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.16e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
TGGTTCGATGCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCAGTA > NC_000913/2433949‑2434239 | tGGTTCGATGCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGt > 3:371710/1‑149 (MQ=255)tGGTTCGATGCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGt < 1:69419/149‑1 (MQ=255)tGGTTCGATGCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGt > 4:373570/1‑149 (MQ=255) tGCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAgc < 3:757313/149‑1 (MQ=255) gCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAgcg > 3:450101/1‑149 (MQ=255) gCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCACGCGCCGCaaaa < 1:165353/149‑4 (MQ=255) gCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCACGCGCCGCaaaa < 2:460839/149‑4 (MQ=255) aGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGt > 3:144526/1‑149 (MQ=255) ttttATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGttt > 1:619021/1‑149 (MQ=255) ttttATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGttt < 1:329649/149‑1 (MQ=255) aTCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGa < 2:98320/149‑1 (MQ=255) tCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGAc > 2:746367/1‑149 (MQ=255) tCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGAc < 3:701375/149‑1 (MQ=255) ttGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGa < 1:560113/149‑1 (MQ=255) gggtACGCATAATGCCATTTTTGCCCCCAACATACAATTAATGTTGAACATTCAACCATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGATCCGTGGAGTTACTTTTTATTTTGCGGCGTGTGCCGCAGCGCGTTTGTGTCGGatt < 2:563425/149‑1 (MQ=255) gggACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGatta < 3:720966/149‑1 (MQ=255) gACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGattatt < 3:468207/149‑1 (MQ=255) cGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGTGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTc < 4:278209/149‑1 (MQ=255) cGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTc < 1:38037/149‑1 (MQ=255) cATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGa < 1:26328/149‑1 (MQ=255) aTAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGAt < 1:401733/149‑1 (MQ=255) aTAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGAt < 2:457308/149‑1 (MQ=255) aTGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGAc > 1:481479/1‑149 (MQ=255) gCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGc > 3:579277/1‑149 (MQ=255) aTTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCg < 4:451289/149‑1 (MQ=255) gCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCaaaa < 3:618970/149‑1 (MQ=255) gCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCaaaa < 3:14057/149‑1 (MQ=255) ccccAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATa > 1:337486/1‑149 (MQ=255) ccccAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATa < 1:230535/149‑1 (MQ=255) cccAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAg < 2:427205/149‑1 (MQ=255) cccAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAg > 1:92355/1‑149 (MQ=255) ccAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGa < 1:510134/149‑1 (MQ=255) ccAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGa > 2:363925/1‑149 (MQ=255) cAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGTACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTCCGATGACGCCCGGCAAAATAGaa > 4:712036/1‑149 (MQ=255) cAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGaa < 4:164828/149‑1 (MQ=255) aaCAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCACGCGCCGCaaaa < 4:506833/106‑4 (MQ=255) aaCAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCACGCGCCGCaaaa > 3:506833/1‑103 (MQ=255) ccATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACaa < 1:363925/149‑1 (MQ=255) cATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACaat > 3:307413/1‑149 (MQ=255) cATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACaat > 4:577831/1‑149 (MQ=255) aTGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGCCGCCCGGCAAAATAGAAACCACaata > 1:251618/1‑149 (MQ=255) aTGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACaata > 1:698377/1‑149 (MQ=255) aTGAATGTTGCACAATAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACaata > 3:499585/1‑149 (MQ=255) tGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTtgt < 1:83866/104‑1 (MQ=255) tGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTtgt > 2:83866/1‑104 (MQ=255) gAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACaataat > 2:323600/1‑149 (MQ=255) tGTTGCACATTAAAACATAACAGGCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATccc > 2:107665/1‑149 (MQ=255) tGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCcgac < 2:619021/149‑1 (MQ=255) tGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCcgac < 1:457283/149‑1 (MQ=255) tGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCcgac < 3:242963/149‑1 (MQ=255) gCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCcga < 1:112463/147‑1 (MQ=255) gCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCcga > 2:112463/1‑147 (MQ=255) acaTTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGAt > 2:188326/1‑149 (MQ=255) caTTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATc < 4:579277/149‑1 (MQ=255) aTTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATca > 3:211071/1‑149 (MQ=255) aTTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATca > 4:654579/1‑149 (MQ=255) aTTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATca > 4:163673/1‑149 (MQ=255) ttAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATcag > 3:628069/1‑149 (MQ=255) ttAAAACATAACAGCACGAAACTTTGGATAAAAAAGTGGTCGTACCGAAGAGATACTTTTTATTTTGCGGCGCGTGCGGCAGCGCGGCTGTGACGGATTATTTCGATCTCGCTCGGCAAAATAGAAACCAGAATAATCGcgacgagccg > 2:760081/1‑145 (MQ=255) aaaCATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGTGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATa < 2:228809/120‑1 (MQ=255) aaaCATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATa > 1:228809/1‑120 (MQ=255) cATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCtt > 3:69397/1‑149 (MQ=255) tAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTaa < 2:375295/149‑1 (MQ=255) tAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTaa < 4:57514/149‑1 (MQ=255) cccGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTACGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTAt < 3:646665/149‑1 (MQ=255) ccGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATc < 2:510056/149‑1 (MQ=255) ccGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATc < 1:190477/149‑1 (MQ=255) ccGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATc < 2:698377/149‑1 (MQ=255) ccGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATc > 1:534130/1‑149 (MQ=255) tttGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCaaaa > 4:680052/1‑99 (MQ=255) tttGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCaaaa < 3:680052/99‑1 (MQ=255) aTAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCgg > 2:480061/1‑149 (MQ=255) aaaaaaGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGa < 4:324869/149‑1 (MQ=255) aaaaGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGAtt < 2:481479/149‑1 (MQ=255) aGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTa < 2:337486/149‑1 (MQ=255) tCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCgaa < 4:211071/149‑1 (MQ=255) tCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCgaa < 3:539586/149‑1 (MQ=255) cgcgGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATa > 2:522430/1‑149 (MQ=255) gcgGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAg < 4:661855/149‑1 (MQ=255) cgGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGc < 3:73130/149‑1 (MQ=255) ttACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCg > 3:346083/1‑149 (MQ=255) cTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAg < 4:304624/149‑1 (MQ=255) tttttATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGTATTGTACCGAAGAAATAGCCTGCGTAgg > 1:113245/1‑149 (MQ=255) tttttATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAgg > 2:702916/1‑149 (MQ=255) tttttATTTTCCGGCGCGTGCCGCACCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGATTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAgg > 1:410539/1‑149 (MQ=255) ttttATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGt > 3:285157/1‑149 (MQ=255) ttttGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTaaaaa < 4:733121/149‑1 (MQ=255) ttttGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTaaaaa > 4:437050/1‑149 (MQ=255) ttttGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTaaaaa < 3:427159/149‑1 (MQ=255) ttGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGaa > 3:166378/1‑105 (MQ=255) ttGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGaa < 4:166378/105‑1 (MQ=255) ctGCGGCACGCGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGc > 2:538240/2‑149 (MQ=255) tGCGGCGTGTGCCGCAGCGCGATTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCa < 2:251618/149‑1 (MQ=255) tGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAACATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCa < 3:654579/149‑1 (MQ=255) tGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCa < 4:628069/149‑1 (MQ=255) tGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCa < 2:159028/149‑1 (MQ=255) tGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCa < 2:113245/149‑1 (MQ=255) tGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCa < 1:316188/149‑1 (MQ=255) cggcgCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCAGt < 3:327744/149‑1 (MQ=255) ggcgCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCAGTa < 4:371710/149‑1 (MQ=255) | TGGTTCGATGCCAGTTTTATCTTTGGGGACGCATAATGCCATTTTTGCCCCCAACAGACCATGAATGTTGCACATTAAAACATAACAGCCCGAAACTTTGGATAAAAAAGTGGTCGAACCGCGGAGTTACTTTTTATTTTGCGGCGCGTGCCGCAGCGCGTTTGTGACGGATTATTTCGATGACGCCCGGCAAAATAGAAACCACAATAATCCCGACGATCAGCAGCTTAAGGTTATCCTGAACCATCGGGATTGTACCGAAGAAATAGCCTGCGTAGGTAAAAAGCAGTA > NC_000913/2433949‑2434239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |