| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,093,463 | A→G | 7.1% | S270S (AGT→AGC) | rhaD ← | rhamnulose‑1‑phosphate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,093,463 | 0 | A | G | 7.1% | 309.9 / 11.0 | 98 | S270S (AGT→AGC) | rhaD | rhamnulose‑1‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base A (41/50); new base G (5/2); total (46/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.34e-01 | |||||||||||
AGTTATGCGCACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCA > NC_000913/4093318‑4093611 | aGTTATGCGCACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTg > 2:653266/1‑149 (MQ=255)aGTTATGCGCACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAAGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTg < 4:378981/149‑1 (MQ=255) ttATGCGCACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGc < 1:510420/149‑1 (MQ=255) aTGCGCACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGa > 3:19514/1‑149 (MQ=255) tGCGCACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAg > 1:391883/1‑149 (MQ=255) gcgcACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGt < 4:545281/149‑1 (MQ=255) cACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGc < 1:98715/149‑1 (MQ=255) aCCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCg > 3:332426/1‑149 (MQ=255) cGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTa > 4:714301/1‑149 (MQ=255) gTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTaa > 2:405667/1‑149 (MQ=255) tttCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGa > 4:243684/1‑149 (MQ=255) tttCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGa > 3:578500/1‑149 (MQ=255) gCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGc > 2:170621/1‑149 (MQ=255) cACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCt < 2:431827/149‑1 (MQ=255) aCTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGGTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACAGGCGAGTGGCGTAACGCCGAAACGCtt < 4:401258/149‑1 (MQ=255) aCTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCtt < 1:231768/149‑1 (MQ=255) cTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGaaa > 4:473430/1‑143 (MQ=255) cTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGaaa < 3:473430/143‑1 (MQ=255) cTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTg > 2:651994/1‑149 (MQ=255) cTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTg < 2:79/149‑1 (MQ=255) tGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGc < 3:564604/149‑1 (MQ=255) gCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGcc < 3:38034/149‑1 (MQ=255) cTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCg > 4:534816/1‑149 (MQ=255) tCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTAt < 1:651994/149‑1 (MQ=255) tGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCa > 4:697231/1‑149 (MQ=255) cAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAActc < 3:603991/149‑1 (MQ=255) tGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCa < 4:182435/149‑1 (MQ=255) gATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACgg > 4:128973/1‑149 (MQ=255) gACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTc < 4:690152/149‑1 (MQ=255) aCGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCt < 2:391883/149‑1 (MQ=255) gCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGt > 2:744848/1‑149 (MQ=255) aTACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCa < 4:172077/149‑1 (MQ=255) tACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCAt < 3:138267/149‑1 (MQ=255) ctctTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATgc > 4:59643/1‑149 (MQ=255) ttCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTc < 1:752547/136‑1 (MQ=255) ttCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTc > 2:752547/1‑136 (MQ=255) cGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGccc < 1:170621/149‑1 (MQ=255) tGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCAt < 1:363504/149‑1 (MQ=255) tGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTCTCATGCCGCCCAt < 3:239047/149‑1 (MQ=255) gggCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATc < 2:404036/149‑1 (MQ=255) gggCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATc < 2:61208/149‑1 (MQ=255) gggCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATc > 4:121618/1‑149 (MQ=255) gggCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATc < 1:43606/149‑1 (MQ=255) gggCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATc < 2:298788/149‑1 (MQ=255) cGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGaa < 3:243684/149‑1 (MQ=255) cGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGaa < 1:310655/149‑1 (MQ=255) gTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGGCGAGCGCTa > 3:654446/1‑104 (MQ=255) gTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTa < 4:654446/104‑1 (MQ=255) ggggTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATaaa > 1:435201/1‑149 (MQ=255) gggTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAAc < 4:91950/149‑1 (MQ=255) gggTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAAc > 4:491569/1‑149 (MQ=255) gTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCt > 2:587950/1‑149 (MQ=255) tttACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCAGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCtt < 1:405667/149‑1 (MQ=255) aCCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGTGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCAc < 4:185421/149‑1 (MQ=255) ccTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCAt < 3:723845/124‑1 (MQ=255) ccTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCAt > 4:723845/1‑124 (MQ=255) tGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTaa < 1:386832/149‑1 (MQ=255) cATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTTTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATa > 3:657786/1‑149 (MQ=255) gACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACtt > 1:620813/1‑149 (MQ=255) aaaGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTtgtg > 4:101572/1‑149 (MQ=255) aaGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGc < 3:705825/149‑1 (MQ=255) aaGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGc < 1:653266/149‑1 (MQ=255) aaGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGc > 2:353828/1‑149 (MQ=255) gCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGa > 4:439277/1‑149 (MQ=255) gCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGAttttt < 2:435201/149‑1 (MQ=255) gATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTg < 4:695452/149‑1 (MQ=255) gATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGCCTGTTTCATGCCGCCCATCGaa < 1:230998/115‑1 (MQ=255) gATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGCCTGTTTCATGCCGCCCATCGaa > 2:230998/1‑115 (MQ=255) aTCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATgccgc > 3:107349/1‑106 (MQ=255) aTCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATgccgc < 4:107349/106‑1 (MQ=255) aTCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTCATACTTGTGCTGAt > 2:27347/1‑141 (MQ=255) aTCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGAt < 1:27347/141‑1 (MQ=255) tGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGa < 3:78141/136‑1 (MQ=255) tGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGa > 4:78141/1‑136 (MQ=255) tGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGgtg > 3:16895/1‑149 (MQ=255) tGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGa < 2:110290/149‑1 (MQ=255) gCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGAt < 3:121618/149‑1 (MQ=255) tCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTa > 2:737224/1‑149 (MQ=255) ccTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTaa > 1:162751/1‑149 (MQ=255) ttACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAAc > 4:145511/1‑149 (MQ=255) ttACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAAc > 3:721628/1‑149 (MQ=255) ttACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAAc > 1:756762/1‑149 (MQ=255) gccactcgccagtgcGCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAAc > 1:344684/7‑149 (MQ=255) tACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAAcc > 3:361745/1‑149 (MQ=255) ccactcgccagtgcGCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAAcc > 2:388078/6‑149 (MQ=255) actcgccagtgcGCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAAc > 2:737627/4‑102 (MQ=255) actcgccagtgcGCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAAc < 1:737627/99‑1 (MQ=255) actcgccagtgcGCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGa < 2:446444/120‑1 (MQ=255) actcgccagtgcGCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGa > 1:446444/4‑123 (MQ=255) ctcgccagtgcGCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGaa > 2:264982/3‑149 (MQ=255) agcgccagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCATGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGaa < 1:507104/149‑1 (MQ=255) agcgccagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTTTGCTGATTTTTCTGCGGTGTCGATTAACCCGaa > 2:380922/1‑149 (MQ=255) agcgccagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGaa < 3:534816/149‑1 (MQ=255) gcgccagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAg < 1:30991/149‑1 (MQ=255) gcgccagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAg < 3:556095/149‑1 (MQ=255) gccagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGt > 1:467572/1‑149 (MQ=255) cagcgcACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGttt < 4:578500/149‑1 (MQ=255) cACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATcc < 4:19514/149‑1 (MQ=255) aCTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCa < 2:467572/149‑1 (MQ=255) | AGTTATGCGCACCGTGAGATTTCAGCACTGCTTCCAGTTCTGGCCAGATGGGATTATGCCGACGCTGATACTCTTCGTGGGCGTCGGGGTTTACCTGCATGACAAAGGCTTTGCGGATCATGTTTGCTCCTTACAGCGCCAGCGCACTGGCGAGTGGCGTAACGCCGAAACGCTTGCCGAGCGCTATCAACTCTTCACGGCTGATGGTCTGTTTCATGCCGCCCATCGAATAAACCTTCACTAATACTTGTGCTGATTTTTCTGCGGTGTCGATTAAACCGAAGGTTTCATCCA > NC_000913/4093318‑4093611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |