New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	648718 =	75 (1.160)	4 (0.060)	4/252	NT	5.4%	coding (854/1533 nt)	citF	citrate lyase, citrate‑ACP transferase (alpha) subunit
	?	NC_000913	648741 =	68 (1.080)					coding (831/1533 nt)	citF	citrate lyase, citrate‑ACP transferase (alpha) subunit

CGGCACCGGCGGCGCATCGCTGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/648744‑648718 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtGCCGGTTTGCATGGAGAAACCTTCTTTGAAGTAGCCAGAGTTGACAATCACATCCGCAGCGCTACGGGCAATAAGCAGTTCGCGCGGGTTAGTGGTCATACGGGTCGCGCCAGCGCCGATTTTTGCAGCATCGCCAACGCGGTCAACT  >  NC_000913/648741‑648888                                                                                                                                                                                 CGGCACCGGCGGCGCATCGCTGGCGGTGCCGGTTTGCATGGAGAAACCTTCTTTGAAGTAGCCAGAGTTGACAATCACATCCGCAGCGCTACGGGCAATAAGCA                                                                         >  1:297158/1‑104 CGGCACCGGCGGCGCATCGCTGGCGGTGCCGGTTTGCATGGAGAAACCTTCTTTGAAGTAGCCAGAGTTGACAATCACATCCGCAGCGCTACGGGCAATAAGCA                                                                         <  2:297158/104‑1       CGGCGGCGCATCGCTGGCGGTGCCGGTTTGCATGGAGAAACCTTCTTTGAAGTAGCCAGAGTTGACAATCACATCCGCAGCGCTACGGGCAATAAGCAGTTCGCGCGGGTTAGTGGTCATACG                                                >  1:348003/1‑123       CGGCGGCGCATCGCTGGCGGTGCCGGTTTGCATGGAGAAACCTTCTTTGAAGTAGCCAGAGTTGACAATCACATCCGCAGCGCTACGGGCAATAAGCAGTTCGCGCGGGTTAGTGGTCATACG                                                <  2:348003/123‑1                           TGCCGGTTTGCATGGAGAAACCTTCTTTGAAGTAGCCAGAGTTGACAATCACATCCGCAGCGCTACGGGCAATAAGCAGTTCGCGCGGGTTAGTGGTCATACGGGTCGCGCCAGCGCCGATTTTTGCAGCATCGCCAACGCGGTCAACT  >  1:440133/1‑149                                                                                                                                                                                 CGGCACCGGCGGCGCATCGCTGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/648744‑648718 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtGCCGGTTTGCATGGAGAAACCTTCTTTGAAGTAGCCAGAGTTGACAATCACATCCGCAGCGCTACGGGCAATAAGCAGTTCGCGCGGGTTAGTGGTCATACGGGTCGCGCCAGCGCCGATTTTTGCAGCATCGCCAACGCGGTCAACT  >  NC_000913/648741‑648888

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.