| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4417665 = | 76 (1.170) | 3 (0.050) | 3/244 | NT | 3.9% | coding (714/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | 4417698 = | 78 (1.280) | coding (747/750 nt) coding (756/756 nt) |
yjfP ulaR |
acyl CoA esterase transcriptional repressor for the L‑ascorbate utilization divergent operon |
|||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAACGCGCGGGAATGCTTTTTAGCCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAAAGATGCTGGCGGAAAAATGTCACGGCAGCATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4417820‑4417665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcatctTTAAACACGCAGAATGCTGACCCCTTGCGCTTCCAGTTGTTGCAGGATTTCCGGGTTAGCATTTTTGCCGGTGATAAGCATATCGATTTGATCGGCACGGCTAAAAAGCATTCCCGCGCGTTCGCCAATCTTACTGCTATCAACCAGT > NC_000913/4417698‑4417845 GAACGCGCGGGAATGCTTTTTAGCCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAAAGATGCTGGCGGAAAAATGTCACGGC > 1:534897/1‑149GAACGCGCGGGAATGCTTTTTAGCCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAAAGATGCTGGCGGAAAAATGTCACGGC > 4:342645/1‑149 GCGGGAATGCTTTTTAGCCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAAAGATGCTGGCGGAAAAATGTCACGGCAGCATC < 2:170466/149‑1 CCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAAAGATGCTGGCGGAAAAATGTCACGGC < 3:101117/126‑1 CCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAAAGATGCTGGCGGAAAAATGTCACGGC > 4:101117/1‑126 GATGCTGGCGGAAAAATGTCACGGCAGCATCTTTAAACACGCAGAATGCTGACCCCTTGCGCTTCCAGTTGTTGCAGGATTTCCGGGTTAGCATTTTTGCCGGTGATAAGCATATCGATTTGATCGGCACGGCTAAAAAGCATTCCCGC > 1:558199/1‑149 TGGCGGAAAAATGTCACGGCAGCATCTTTAAACACGCAGAATGCTGACCCCTTGCGCTTCCAGTTGTTGCAGGATTTCCGGGTTA < 3:73880/85‑1 TGGCGGAAAAATGTCACGGCAGCATCTTTAAACACGCAGAATGCTGACCCCTTGCGCTTCCAGTTGTTGCAGGATTTCCGGGTTA > 4:73880/1‑85 CAGCATCTTTAAACACGCAGAATGCTGACCCCTTGCGCTTCCAGTTGTTGCAGGATTTCCGGGTTAGCATTTTTGCCGGTGATAAGCATATCGATTTGATCGGCACGGCTAAAAAGCATTCCCGCGCGTTCGCCAATCTTACTGCTATC > 1:574408/1‑149 TCTTTAAACACGCAGAATGCTGACCCCTTGCGCTTCCAGTTGTTGCAGGATTTCCGGGTTAGCATTTTTGCCGGTGATAAGCATATCGATTTGATCGGCACGGCTAAAAAGCATTCCCGCGCGTTCGCCAATCTTACTGCTATCAACCA < 2:30102/149‑1 TTTAAACACGCAGAATGCTGACCCCTTGCGCTTCCAGTTGTTGCAGGATTTCCGGGTTAGCATTTTTGCCGGTGATAAGCATATCGATTTGATCGGCACGGCTAAAAAGCATTCCCGCGCGTTCGCCAATCTTACTGCTATCAACCAGT > 2:61841/1‑149 GAACGCGCGGGAATGCTTTTTAGCCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAAAGATGCTGGCGGAAAAATGTCACGGCAGCATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4417820‑4417665‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcatctTTAAACACGCAGAATGCTGACCCCTTGCGCTTCCAGTTGTTGCAGGATTTCCGGGTTAGCATTTTTGCCGGTGATAAGCATATCGATTTGATCGGCACGGCTAAAAAGCATTCCCGCGCGTTCGCCAATCTTACTGCTATCAACCAGT > NC_000913/4417698‑4417845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |