New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1056964	45 (0.690)	4 (0.070)	3/246	NT	8.6%	coding (704/1029 nt)	torT	periplasmic sensory protein associated with the TorRS two‑component regulatory system
	?	NC_000913	= 1056974	42 (0.680)					coding (714/1029 nt)	torT	periplasmic sensory protein associated with the TorRS two‑component regulatory system

GGGTTTTCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAGGGGGAACTG  >  NC_000913/1056818‑1057112                                                                                                                                                   |                                                                                                                                                     gggTTTTCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCgg                                                                                                                                                    >  2:111374/1‑149 (MQ=255)    ttttCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCag                                                                                                                                                 >  2:11400/1‑149 (MQ=255)         gcgcAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAggcg                                                                                                                                            >  3:16635/1‑149 (MQ=255)          cgcAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGg                                                                                                                                           >  3:244297‑M2/1‑148 (MQ=255)             aGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGgcaa                                                                                                                                        >  4:172976‑M2/1‑145 (MQ=255)             aGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGCGATAACGACATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCcgcctctgccgcaa                                                                                                                                        <  3:504787‑M1/149‑15 (MQ=255)               ccATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCcgcctctgccgcaatg                                                                                                                                      <  2:361578‑M1/149‑17 (MQ=255)               ccATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGgcaatg                                                                                                                                      >  1:29078‑M2/1‑143 (MQ=255)               ccATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGgcaatg                                                                                                                                      <  3:555494‑M2/149‑7 (MQ=255)                 aTTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATggg                                                                                                                                    >  2:309264/1‑149 (MQ=255)                 aTTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATggg                                                                                                                                    <  3:29260/149‑1 (MQ=255)                 aTTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATggg                                                                                                                                    >  1:543850/1‑149 (MQ=255)                  ttGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAAGGGCCATTGCGGCAGGGGCGGCACTgggg                                                                                                                                   >  4:119746/1‑149 (MQ=255)                      cGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAg                                                                                                                               >  4:7006/1‑149 (MQ=255)                       ggAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAgg                                                                                                                              <  4:409347/149‑1 (MQ=255)                                gTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCt                                                                                                                     <  1:83211/149‑1 (MQ=255)                                   cGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGaa                                                                                                                  <  3:200300/149‑1 (MQ=255)                                         gttgATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGAAATGGGGGAAGGGCGTAACCTGAAAAcgcc                                                                                                            >  1:99205/1‑149 (MQ=255)                                          ttgATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATggg                                                                                                                                    <  2:414353/124‑1 (MQ=255)                                          ttgATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATggg                                                                                                                                    >  1:414353/1‑124 (MQ=255)                                          ttgATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAAcgccg                                                                                                           <  3:126044/149‑1 (MQ=255)                                            gATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCt                                                                                                         >  3:62058/1‑149 (MQ=255)                                                           gATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGtt                                                                                          >  3:574882/1‑149 (MQ=255)                                                            aTAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGttt                                                                                         >  4:426744/1‑149 (MQ=255)                                                            aTAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGttt                                                                                         <  1:111374/149‑1 (MQ=255)                                                               aCGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTAt                                                                                      >  4:349751/1‑149 (MQ=255)                                                               aCGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTAt                                                                                      <  1:134327/149‑1 (MQ=255)                                                                  atatTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCtt                                                                                   <  1:503713/149‑1 (MQ=255)                                                                     ttGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTca                                                                                >  1:271331/1‑149 (MQ=255)                                                                          aTCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGCAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCa                                                                           <  2:580081/149‑1 (MQ=255)                                                                               gCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGt                                                                                           <  1:389033/128‑1 (MQ=255)                                                                               gCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGACGt                                                                                           >  2:389033/1‑128 (MQ=255)                                                                                             aGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTa                                                                                       >  4:263308/1‑118 (MQ=255)                                                                                             aGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTa                                                                                       <  3:263308/118‑1 (MQ=255)                                                                                                agaTGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCgg                                                     <  1:309264/149‑1 (MQ=255)                                                                                                agaTGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCgg                                                     <  2:271331/149‑1 (MQ=255)                                                                                                 gaTGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCggg                                                    <  4:574882/149‑1 (MQ=255)                                                                                                    gCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGaa                                                 <  2:392555/149‑1 (MQ=255)                                                                                                     cTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCcgcctctgccgcaatg                                                                                                                                      <  2:529861‑M1/63‑17 (MQ=255)                                                                                                     cTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCcgcctctgccgcaatg                                                                                                                                      >  1:529861‑M1/1‑47 (MQ=255)                                                                                                      tGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAaga                                               >  4:84281/1‑149 (MQ=255)                                                                                                      tGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAaga                                               <  3:92119/149‑1 (MQ=255)                                                                                                       ggAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAagag                                              >  2:592571/1‑149 (MQ=255)                                                                                                              cATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTAt                                       >  4:507487/1‑149 (MQ=255)                                                                                                               aTCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAaga                                               >  3:253688/1‑140 (MQ=255)                                                                                                               aTCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAaga                                               <  4:253688/140‑1 (MQ=255)                                                                                                                tCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAAcgc                                                                                                             <  3:464534/77‑1 (MQ=255)                                                                                                                tCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAAcgc                                                                                                             >  4:464534/1‑77 (MQ=255)                                                                                                                   aGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTg                                  >  4:580799/1‑149 (MQ=255)                                                                                                                                    ccGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTc                 <  3:84281/149‑1 (MQ=255)                                                                                                                                     cGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCt                <  2:378941/149‑1 (MQ=255)                                                                                                                                      ggAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTg               >  2:266781/1‑149 (MQ=255)                                                                                                                                        aaCGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGc             <  4:245498/149‑1 (MQ=255)                                                                                                                                            gCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAggg         <  4:3362/149‑1 (MQ=255)                                                                                                                                            gCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAggg         <  1:592571/149‑1 (MQ=255)                                                                                                                                              cATTGCcgcctctgccgcaatggccgttccggcaacgacgtcgatttctggatggcgttccagcatctcctgcaacaggttacgctggatttcaatatcgttatcaccaagcgcaatatcaacaatacgcaccgggcttccggcaatgg       >  1:29078‑M1/1‑6 (MQ=255)                                                                                                                                              cATTGCcgcctctgccgcaatggccgttccggcaacgacgtcgatttctggatggcgttccagcatctcctgcaacaggttacgctggatttcaatatcgttatcaccaagcgcaatatcaacaatacgcaccgggcttccggcaatgg       <  3:555494‑M1/149‑144 (MQ=255)                                                                                                                                              cATTGCGGCAGAGGCGgcaatggccgttccggcaacgacgtcgatttctggatggcgttccagcatctcctgcaacaggttacgctggatttcaatatcgttatcaccaagcgcaatatcaacaatacgcaccgggcttccggcaatgg       <  2:361578‑M2/149‑134 (MQ=255)                                                                                                                                              cATTGCGGCAGAGGCGgcaatggccgttccggcaacgacgtcgatttctggatggcgttccag                                                                                             >  1:529861‑M2/1‑16 (MQ=255)                                                                                                                                              cATTGCGGCAGAGGCGgcaatggccgttccggcaacgacgtcgatttctggatggcgttccag                                                                                             <  2:529861‑M2/63‑48 (MQ=255)                                                                                                                                               aTTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAggg         >  1:500922/1‑146 (MQ=255)                                                                                                                                               aTTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAggg         <  2:500922/146‑1 (MQ=255)                                                                                                                                                ttGCcgcctctgccgcaatggccgttccggcaacgacgtcgatttctggatggcgttccagcatctcctgcaacaggttacgctggatttcaatatcgttatcaccaagcgcaatatcaacaatacgcaccgggcttccggcaatggct     >  4:172976‑M1/1‑4 (MQ=255)                                                                                                                                                ttGCGGCAGAGGCGgcaatggccgttccggcaacgacgtcgatttctggatggcgttccagcatctcctgcaacaggttacgctggatttcaatgtcgttatcgccaagcgcaatatcaacaatacgcaccgggcttccggcaatggct     <  3:504787‑M2/149‑136 (MQ=255)                                                                                                                                                   ccgcctctgccgcaatggccgttccggcaacgacgtcgatttctggatggcgttccagcatctcctgcaacaggttacgctggatttcaatatcgttatcaccaagcgcaatatcaacaatacgcaccgggcttccggcaatggctgcg  >  3:244297‑M1/1‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     GGGTTTTCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAGGGGGAACTG  >  NC_000913/1056818‑1057112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.