New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1390821	58 (0.890)	3 (0.050)	3/248	NT	5.1%	pseudogene (42/138 nt)	ymjC	pseudogene
	?	NC_000913	= 1390830	56 (0.910)					pseudogene (33/138 nt)	ymjC	pseudogene

CGCTATGTCATCGATCTTGTATCACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTCCTCAAAGAACGGAGCTAATAC  >  NC_000913/1390673‑1390965                                                                                                                                                     |                                                                                                                                                 cGCTATGTCATCGATCTTGTATCACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGG                                                                                                                                                  <  1:327811‑M1/149‑1 (MQ=255)          aTCGATCTTGTATCACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGa                                                                                                                                         <  1:76552/149‑1 (MQ=255)               tCTTGTATCACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATGAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGAccgcc                                                                                                                                    <  3:4863‑M2/149‑6 (MQ=255)                   gTATCACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGtcagatagcccgccatgt                                                                                                                                <  1:343624‑M1/149‑19 (MQ=255)                   gTATCACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCa                                                                                                                                >  3:585559/1‑149 (MQ=255)                     aTCACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGAGGGCTATCTGACCGCCAGCAcc                                                                                                                              >  3:332661/1‑149 (MQ=255)                       cACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCaa                                                                                                                            >  4:273776/1‑149 (MQ=255)                        aCTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAg                                                                                                                           >  4:62912/1‑149 (MQ=255)                        aCTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAg                                                                                                                           >  4:164828/1‑149 (MQ=255)                        aCTTATTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTCTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATAGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAg                                                                                                                           <  4:493017/149‑1 (MQ=255)                               tGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGt                                                                                                                    <  3:459669/149‑1 (MQ=255)                                   ggAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGAc                                                                                                                                        >  4:435316‑M2/1‑124 (MQ=255)                                   ggAAGTTGTTTGCATTTTATCAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGAc                                                                                                                                        <  3:435316‑M2/125‑2 (MQ=255)                                        ttgttTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTc                                                                                                           <  4:178228/149‑1 (MQ=255)                                         tgttTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCa                                                                                                          <  3:15104/149‑1 (MQ=255)                                              gCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGaaa                                                                                                     <  2:305782/149‑1 (MQ=255)                                               cATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGaaaa                                                                                                    <  2:218918/149‑1 (MQ=255)                                                aTTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAAt                                                                                                   >  2:505002/1‑149 (MQ=255)                                                 ttttATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGc                                                                                                                                                >  1:498901/1‑103 (MQ=255)                                                 ttttATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGc                                                                                                                                                <  2:498901/103‑1 (MQ=255)                                                   ttattaGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTACCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTAt                                                                                                <  4:379593/149‑1 (MQ=255)                                                    tattaGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATc                                                                                               <  1:151466/149‑1 (MQ=255)                                                         gTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGa                                                                                          >  1:38650/1‑149 (MQ=255)                                                         gTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGa                                                                                          >  1:44766/1‑149 (MQ=255)                                                             gATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGattat                                                                                      >  1:489522/1‑149 (MQ=255)                                                              aTAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATGAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGattatt                                                                                     <  4:4863/149‑1 (MQ=255)                                                              aTAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTATTGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGattatt                                                                                     <  4:418146/149‑1 (MQ=255)                                                               tAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTg                                                                                    <  3:164828/149‑1 (MQ=255)                                                                   gTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGgcag                                                                                >  1:37068/1‑149 (MQ=255)                                                                   gTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGgcag                                                                                >  3:476257/1‑149 (MQ=255)                                                                        tgGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAata                                                                           >  2:258967/1‑149 (MQ=255)                                                                            tttttGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCActat                                                                          <  1:514062/146‑1 (MQ=255)                                                                            tttttGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAatat                                                                          >  2:514062/1‑146 (MQ=255)                                                                                    ggctgACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCata                                                               <  1:47172/149‑1 (MQ=255)                                                                                       tgACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCa                                                            >  1:372082/1‑149 (MQ=255)                                                                                        gACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCAc                                                           >  1:184122/1‑149 (MQ=255)                                                                                             gCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAg                                                                                                                     >  1:498675/1‑86 (MQ=255)                                                                                             gCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAg                                                                                                                     <  2:498675/86‑1 (MQ=255)                                                                                             gCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTg                                                      >  3:404368/1‑149 (MQ=255)                                                                                              cAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCa                                                                                                          >  1:131522/1‑96 (MQ=255)                                                                                              cAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCa                                                                                                          <  2:131522/96‑1 (MQ=255)                                                                                               aaaTAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCg                                                    >  1:560085/1‑149 (MQ=255)                                                                                                 aTAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGa                                                                                          <  2:70018/109‑1 (MQ=255)                                                                                                 aTAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCAGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGa                                                                                          >  1:70018/1‑109 (MQ=255)                                                                                                  tAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGAc                                                                                                                                        <  3:343571‑M2/62‑2 (MQ=255)                                                                                                  tAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGAc                                                                                                                                        >  4:343571‑M2/1‑61 (MQ=255)                                                                                                    aaGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGAttt                                               <  4:585559/149‑1 (MQ=255)                                                                                                      gtttgtttAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGtcagatagcccgcc                                                                                                                                    >  4:147962‑M1/1‑48 (MQ=255)                                                                                                      gtttgtttAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGtcagatagcccgcc                                                                                                                                    <  3:147962‑M1/62‑15 (MQ=255)                                                                                                      gtttgtttAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCGGCAATATGCCAGTCCATATCACTATTGCGGATTTGa                                             >  3:87756/1‑149 (MQ=255)                                                                                                      gtttgtttAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGa                                             <  1:508961/149‑1 (MQ=255)                                                                                                              aaTGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGa                                                  <  4:385537/136‑1 (MQ=255)                                                                                                              aaTGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGa                                                  >  3:385537/1‑136 (MQ=255)                                                                                                                   tttGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTa                                >  3:40828/1‑149 (MQ=255)                                                                                                                     tGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACa                              <  3:458255/149‑1 (MQ=255)                                                                                                                       cTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACaga                            <  2:372082/149‑1 (MQ=255)                                                                                                                       cTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACaga                            >  4:21021/1‑149 (MQ=255)                                                                                                                         tATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACa                              <  4:351760/145‑1 (MQ=255)                                                                                                                         tATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACa                              >  3:351760/1‑145 (MQ=255)                                                                                                                             tGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTcc                      <  2:246028/149‑1 (MQ=255)                                                                                                                                      aTTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTCCTCAAAGAAc             >  3:127555/1‑149 (MQ=255)                                                                                                                                      aTTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTCCTCAAAGAAc             <  2:212508/149‑1 (MQ=255)                                                                                                                                          aTCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTCCTCAAAGAACGGAg         >  4:254678/1‑149 (MQ=255)                                                                                                                                           tCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCata                                                               <  3:5503/94‑1 (MQ=255)                                                                                                                                           tCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCata                                                               >  4:5503/1‑94 (MQ=255)                                                                                                                                             acaTGGCGGGCTATCTGAccgccatgtgattaatcaactggcagataagcaaaccattaaacaaactttatttgcccgtcagccagcaaaaatccacaaaccctatccaactaataaaatgcaaacaacttccggcaaaaaagtgatac      <  1:343624‑M2/149‑132 (MQ=255)                                                                                                                                             acaTGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTCCTCAAAGAACGGAGCTa      >  4:176684/1‑149 (MQ=255)                                                                                                                                             acaTGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTCCTCAAAGAACGGAGCTa      >  2:45972/1‑149 (MQ=255)                                                                                                                                               aTGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTCCTCAAAGAACGGAGCTAAt    <  3:305365/149‑1 (MQ=255)                                                                                                                                                tGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCGATATGCCAGTCCATATCACTTATGCGGATTTGAATATGTTTCATTACAGAGTTTACTCAAAGAACGGAGCTAATa   <  2:38650/149‑1 (MQ=255)                                                                                                                                                 ggCGGtcagatagcccgccatgtgattaatcaactggcagataagcaaaccattaaacaaacttcatttgcccgtcagccagcaaaaatccacaaaccctatccaactaataaaatgcaaacaacttccggcaaaaaagtgatacaaga  <  3:4863‑M1/149‑145 (MQ=255)                                                                                                                                                 ggCGGGCTATCTGAccgccatgtgattaatcaactggcagataagcaaaccattaaacaaac                                                                                         >  4:147962‑M2/1‑14 (MQ=255)                                                                                                                                                 ggCGGGCTATCTGAccgccatgtgattaatcaactggcagataagcaaaccattaaacaaac                                                                                         <  3:147962‑M2/62‑49 (MQ=255)                                                                                                                                                     gtcagatagcccgccatgtgattaatcaactggcagataagcaaaccattaaacaaactttatttgcccgtcagccagcaaaaatccacaaaccctatccaactgataaaatgcaaacaacttcc                      <  3:435316‑M1/125‑125 (MQ=255)                                                                                                                                                     gtcagatagcccgccatgtgattaatcaactggcagataagcaaaccattaaacaaactttatttgcccgtcagccagcaaaaatccacaaaccctatccaactaataaaatgcaaacaacttcc                      >  4:435316‑M1/1‑1 (MQ=255)                                                                                                                                                     gtcagatagcccgccatgtgattaatcaactggcagataagcaaaccattaaacaaacttta                                                                                     >  4:343571‑M1/1‑1 (MQ=255)                                                                                                                                                     gtcagatagcccgccatgtgattaatcaactggcagataagcaaaccattaaacaaacttta                                                                                     <  3:343571‑M1/62‑62 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CGCTATGTCATCGATCTTGTATCACTTTTTTGCCGGAAGTTGTTTGCATTTTATTAGTTGGATAGGGTTTGTGGATTTTTGCTGGCTGACGGGCAAATAAAGTTTGTTTAATGGTTTGCTTATCTGCCAGTTGATTAATCACATGGCGGGCTATCTGACCGCCAGCACCAAGAATCAGTACATTTTTCATGAAAATTATCCCAGATTATTGGCAGCAATATGCCAGTCCATATCACTATTGCGGATTTGAATATGTTTCATTACAGAGTTTCCTCAAAGAACGGAGCTAATAC  >  NC_000913/1390673‑1390965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.