New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 190716449 (0.760)3 (0.050) 3/242 NT 5.8% intergenic (‑104/+62) rlmA/cspC 23S rRNA m(1)G745 methyltransferase, SAM‑dependent/stress protein, member of the CspA‑family
?NC_000913 = 1907171 52 (0.860)intergenic (‑111/+55) rlmA/cspC 23S rRNA m(1)G745 methyltransferase, SAM‑dependent/stress protein, member of the CspA‑family

GCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTT  >  NC_000913/1907021‑1907312
                                                                                                                                               |                                                                                                                                                    
gcgAAAGCGGCTGATGCCAAAGTGGACAGGAAAAAGACATGACAACGCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGGGGCGGGCAAATATCCGAACGCCAGGAGGGAAGATAAAGCATAGTAAAAAGCCTCGCATTc                                                                                                                                                 >  2:354439/1‑149 (MQ=255)
gcgAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGGCAACTCCTGCAGGATACTAAAGGCCGCTAGTGTAACGCGAATCACGCGGCGCGCAAATATCCGAACGCCAGGAGCGGAGATAAAGCATAGTAAAATGCCTCGCATTc                                                                                                                                                 >  4:361803/1‑149 (MQ=255)
    aaGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGAcg                                                                                                                                             <  1:473809‑M2/149‑3 (MQ=255)
       agGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGAcgagg                                                                                                                                          >  1:1985‑M2/1‑144 (MQ=255)
         gCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGAAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGAcgaggct                                                                                                                                        <  3:157396‑M2/149‑8 (MQ=255)
           tGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGtcgaatgcgaggcttt                                                                                                                                      <  4:495227‑M1/149‑17 (MQ=255)
                  aaaGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAACGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCga                                                                                                                               <  4:192187/149‑1 (MQ=255)
                  aaaGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATACGACGAGGCTTTATAGCga                                                                                                                               >  4:399191/1‑149 (MQ=255)
                   aaGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCgag                                                                                                                              <  4:114491/149‑1 (MQ=255)
                        gACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGa                                                                                                                         >  1:52630/1‑149 (MQ=255)
                         aCAGGAAAAAGACAGGACAACTCAGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGaa                                                                                                                        <  3:229844/149‑1 (MQ=255)
                            ggAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCG‑‑‑TCGAatgcgaggctttttactatgctttatctt                                                                                                                  <  4:145154‑M2/149‑30 (MQ=255)
                            ggAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCG‑‑‑TCGAatgcgaggctttttactatgctttatctt                                                                                                                  >  3:145154‑M2/1‑120 (MQ=255)
                              aaaaaGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGGAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTa                                                                                                                   <  4:36131/149‑1 (MQ=255)
                              aaaaaGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTa                                                                                                                   >  3:111769/1‑149 (MQ=255)
                                  aGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTca                                                                                                               <  1:333274/149‑1 (MQ=255)
                                    aCATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTcaca                                                                                                             <  4:69041/149‑1 (MQ=255)
                                     cATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCacac                                                                                                            <  1:584880/149‑1 (MQ=255)
                                        gACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTc                                                                                                         >  2:17955/1‑149 (MQ=255)
                                         aCAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCa                                                                                                        <  3:128440/149‑1 (MQ=255)
                                           aaCTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGa                                                                                                      >  3:500303/1‑149 (MQ=255)
                                           aaCTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGa                                                                                                      >  3:21233/1‑149 (MQ=255)
                                            aCTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGAt                                                                                                     <  2:7976/149‑1 (MQ=255)
                                              tCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCa                                                                                                   <  4:181565/149‑1 (MQ=255)
                                              tCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCa                                                                                                   >  1:442405/1‑149 (MQ=255)
                                                 ggCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTg                                                                                                <  2:473809/149‑1 (MQ=255)
                                                   cAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGa                                                                                              <  3:280800/149‑1 (MQ=255)
                                                    aGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTcaca                                                                                                             >  4:354435/1‑133 (MQ=255)
                                                    aGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTcaca                                                                                                             <  3:354435/133‑1 (MQ=255)
                                                          cTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATc                                                                                       <  4:500303/149‑1 (MQ=255)
                                                           tAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCa                                                                                      >  4:584380/1‑149 (MQ=255)
                                                           tAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCa                                                                                      >  3:433289/1‑149 (MQ=255)
                                                             aaGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGa                                                                                    >  1:474749/1‑149 (MQ=255)
                                                             aaGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGa                                                                                    <  4:425856/149‑1 (MQ=255)
                                                               ggCCGCAATTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTACAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGTTTGCAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATa                                                                                  <  3:361803/149‑1 (MQ=255)
                                                               ggCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATa                                                                                  <  4:111769/149‑1 (MQ=255)
                                                                  cGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGACTCGATCAGATAGCt                                                                               >  2:407820/1‑149 (MQ=255)
                                                                   gCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTg                                                                              >  3:519604/1‑149 (MQ=255)
                                                                    cAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGt                                                                             <  4:354338/149‑1 (MQ=255)
                                                                             cgcgAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAAc                                                                    <  2:52630/149‑1 (MQ=255)
                                                                              gcgAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACa                                                                   <  4:52120/149‑1 (MQ=255)
                                                                                   tCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACTCTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGc                                                              <  3:399191/149‑1 (MQ=255)
                                                                                   tCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGc                                                              >  3:527234/1‑149 (MQ=255)
                                                                                             ggCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCAGACCTTTc                                                    <  3:540171/149‑1 (MQ=255)
                                                                                                 aaTATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGc                                                >  2:504937/1‑149 (MQ=255)
                                                                                                  atatCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGcc                                               <  4:141115/149‑1 (MQ=255)
                                                                                                   tatCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCg                                              >  3:51305/1‑149 (MQ=255)
                                                                                                              cAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTc                                   <  4:51305/149‑1 (MQ=255)
                                                                                                              cAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTc                                   <  2:474749/149‑1 (MQ=255)
                                                                                                               aGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCg                                  >  3:425886/1‑149 (MQ=255)
                                                                                                                 gAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGaa                                <  3:584380/149‑1 (MQ=255)
                                                                                                                     gAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCa                            >  1:47226/1‑149 (MQ=255)
                                                                                                                      aaGATAAAGCATAGTAAAAAGCCTCGcattcgacgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcc                           >  3:145154‑M1/1‑26 (MQ=255)
                                                                                                                      aaGATAAAGCATAGTAAAAAGCCTCGcattcgacgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcc                           <  4:145154‑M1/149‑124 (MQ=255)
                                                                                                                       aGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAAc                          <  3:370320/149‑1 (MQ=255)
                                                                                                                              gCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGa                   >  4:490163/1‑149 (MQ=255)
                                                                                                                                 tAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCt                >  3:78134/1‑149 (MQ=255)
                                                                                                                                      aaaaGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGa                                                                                    >  2:79676/1‑76 (MQ=255)
                                                                                                                                      aaaaGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGa                                                                                    <  1:79676/76‑1 (MQ=255)
                                                                                                                                       aaaGCCTCGCATTCGAcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttgccatca          <  4:495227‑M2/149‑134 (MQ=255)
                                                                                                                                         aGCCTCGtcgaatgcgaggctttttactatgctttatcttcgcttctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttgccatcagc        <  3:157396‑M1/149‑143 (MQ=255)
                                                                                                                                           ccTCGtcgaatgcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttgccatcagcct      >  1:1985‑M1/1‑5 (MQ=255)
                                                                                                                                           ccTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCagag      >  1:5573/1‑149 (MQ=255)
                                                                                                                                            cTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGt     >  3:301125/1‑149 (MQ=255)
                                                                                                                                              cgtcgaatgcgaggctttttactatgctttatcttcgctcctggcgttcggatatttgcccgccgcgtgattcgcgttacacttgcggcctttagtatcctgccggagttgtcatgtctttttcctgtccactttgccatcagcctctt   <  1:473809‑M1/149‑148 (MQ=255)
                                                                                                                                               gCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGtttt  >  2:341758/1‑149 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
GCGAAAGAGGCTGATGGCAAAGTGGACAGGAAAAAGACATGACAACTCCGGCAGGATACTAAAGGCCGCAAGTGTAACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGCCTCGCATTCGACGAGGCTTTATAGCGAGATTGAAGCGTATTCACACTTCAGATCAGTGGATTCGATCAGATAGCTGTTACGTTAACAGCTGCCGGACCTTTCTGGCCGTCCTGAATTTCGAACTCAACGTTCTGACCTTCAGCCAGAGTTTT  >  NC_000913/1907021‑1907312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.