New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3673203 =	53 (0.820)	3 (0.050)	3/252	NT	5.5%	coding (790/900 nt)	yhjC	LysR family putative transcriptional regulator
	?	NC_000913	3673258 =	51 (0.810)					coding (845/900 nt)	yhjC	LysR family putative transcriptional regulator

AAGTCTGGCGGCATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTAAGAATGACCACGACAGAAG  >  NC_000913/3673056‑3673348                                                                                                                                                    |                                                                                                                                                  ccagatcctggatgggacgtttgatctcgttttcctgcgtcatccgctcttttgtccttctgtcgtggtcattcttaaaaagtatagtcggtcagtccaggtactctttcattacgccagccagccactgcataaacaggtttacacGc                                                                                                                                                  <  2:50157‑M1/2‑1 (MQ=255) aaGTCTGGCGGCATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGc                                                                                                                                                  >  1:126906/1‑149 (MQ=255)  cagatcctggatgggacgtttgatctcgttttcctgcgtcatccgctcttttgtccttctgtcgtggtcattcttaaaaagtatagtcggtcagtccaggtactctttcattacgccagccagccactgcataaacaggtttacacGcc                                                                                                                                                 <  2:50353‑M1/3‑1 (MQ=255)      tGGCGGCATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGTTCTTGCCGGTCTGGGGATTATTCAGACCCCGCGCATTGCCGTGCGGGAAGCCCTGCGTGCCGGGCCGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGc                                                                                                                                             <  2:147908/149‑1 (MQ=255)      tGGCGGCATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGc                                                                                                                                             <  2:180920/149‑1 (MQ=255)            cATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTCTTACCTGGCTACCGTGCCGAGCCGctct                                                                                                                                       <  3:38962/149‑1 (MQ=255)            cATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGctct                                                                                                                                       <  3:222386/149‑1 (MQ=255)              tGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTcc                                                                                                                                     <  1:78409/149‑1 (MQ=255)                ttGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCt                                                                                                                                   >  1:328543/1‑149 (MQ=255)                ttGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCt                                                                                                                                   >  1:129794/1‑149 (MQ=255)                     ggTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGc                                                                                                                              >  4:325409/1‑149 (MQ=255)                        aaaCAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGCGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTgg                                                                                                                           <  4:384977/149‑1 (MQ=255)                             gTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTAt                                                                                                                      >  3:154268/1‑149 (MQ=255)                             gTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTAt                                                                                                                      >  3:174482/1‑149 (MQ=255)                                  gAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATc                                                                                                                     <  4:330816/145‑1 (MQ=255)                                  gAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATc                                                                                                                     >  3:330816/1‑145 (MQ=255)                                  gAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCa                                                                                                                 <  1:146939/149‑1 (MQ=255)                                       cTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTc                                                                                                            <  2:328543/149‑1 (MQ=255)                                         aTCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCgg                                                                                                          <  3:325409/149‑1 (MQ=255)                                            ccgctcttttgtccttctgtcgtggtcattcttaaaaagtatagtcggtcagtccaggtactctttcattacgccagccagccactgcataaacaggtttacacGCCGGGAAAG‑CTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGc                                                                                                      >  1:269498‑M1/105‑149 (MQ=255)                                             cACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGc                                                                                                      >  1:5400/1‑149 (MQ=255)                                              aCCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCt                                                                                                     >  1:301164/1‑149 (MQ=255)                                                cgccgGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGt                                                                                                                          <  1:200985/126‑1 (MQ=255)                                                cgccgGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGt                                                                                                                          >  2:200985/1‑126 (MQ=255)                                                       tccttctgtcgtggtcattcttaaaaagtatagtcggtcagtccaggtactctttcattacgccagccagccactgcataaacaggtttacacGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCg                                                                                            <  4:196667‑M1/56‑1 (MQ=255)                                                        ccttctgtcgtggtcattcttaaaaagtatagtcggtcagtccaggtactctttcattacgccagccagccactgcataaacaggtttacacGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCgt                                                                                           >  3:196667‑M1/93‑149 (MQ=255)                                                              gTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAAc                                                                                     <  3:111661/149‑1 (MQ=255)                                                                   gggATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGtt                                                                                <  2:379744/149‑1 (MQ=255)                                                                      attattCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTAt                                                                             >  2:464275/1‑149 (MQ=255)                                                                         attCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCa                                                                          <  1:393214/149‑1 (MQ=255)                                                                          ttCAGATCCCGCGCATTGCCGTGCGGGAAGCCCTGCGTGGCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAg                                                                         <  3:366844/149‑1 (MQ=255)                                                                          ttCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAg                                                                         <  1:246635/149‑1 (MQ=255)                                                                          ttCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAg                                                                         <  2:450160/149‑1 (MQ=255)                                                                            cAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGtg                                                                       <  4:150344/149‑1 (MQ=255)                                                                             aGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATc                                                                                                                     <  1:318858/102‑1 (MQ=255)                                                                             aGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATc                                                                                                                     >  2:318858/1‑102 (MQ=255)                                                                                tCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGtggctg                                                                   >  4:527406/1‑149 (MQ=255)                                                                                   cgcgCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGtggctggct                                                                <  2:129794/149‑1 (MQ=255)                                                                                    gcgcATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGcc                                                                                                                                            >  3:370611/1‑72 (MQ=255)                                                                                    gcgcATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGcc                                                                                                                                            <  4:370611/72‑1 (MQ=255)                                                                                        acggcaatGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGt                                                           >  3:76795/8‑149 (MQ=255)                                                                                          tGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTaa                                                         <  1:499295/149‑1 (MQ=255)                                                                                             cGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGa                                                      <  4:154268/149‑1 (MQ=255)                                                                                             cGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGa                                                      >  4:134244/1‑149 (MQ=255)                                                                                                   cgAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGc                                                                                                               <  4:80125/86‑1 (MQ=255)                                                                                                   cgAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGc                                                                                                               >  3:80125/1‑86 (MQ=255)                                                                                                    gAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCt                                                                                   >  3:30375/1‑113 (MQ=255)                                                                                                    gAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCt                                                                                   <  4:30375/113‑1 (MQ=255)                                                                                                                         cTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACt                          >  3:163256/1‑149 (MQ=255)                                                                                                                          ttATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAaga                                                  >  4:184897/1‑124 (MQ=255)                                                                                                                          ttATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAaga                                                  <  3:184897/124‑1 (MQ=255)                                                                                                                               gAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTaa                    <  1:8899/149‑1 (MQ=255)                                                                                                                               gAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTaa                    <  1:251777/149‑1 (MQ=255)                                                                                                                                  gTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTAAGaa                 <  2:140050/149‑1 (MQ=255)                                                                                                                                   tATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATAc                           >  3:308838/1‑138 (MQ=255)                                                                                                                                   tATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATAc                           <  4:308838/138‑1 (MQ=255)                                                                                                                                    aTTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTAAGAATg               >  1:50353/1‑149 (MQ=255)                                                                                                                                     ttACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTAAGAATGa              >  4:536034/1‑149 (MQ=255)                                                                                                                                              tACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTAAGAATGACCACGACAg     >  3:290819/1‑149 (MQ=255)                                                                                                                                                 cGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTAAGAATGACCACGACAGAAg  <  3:536034/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  AAGTCTGGCGGCATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGACCGACTATACTTTTTAAGAATGACCACGACAGAAG  >  NC_000913/3673056‑3673348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.