New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 389016578 (1.200)3 (0.050) 3/240 NT 4.0% intergenic (+20/‑71) tnaA/tnaB tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/tryptophan transporter of low affinity
?NC_000913 = 3890174 73 (1.220)intergenic (+29/‑62) tnaA/tnaB tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/tryptophan transporter of low affinity
Rejected: Frequency below/above cutoff threshold.

Only 100 of 110 total aligned reads displayed.

ACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAGGTACAGTAATTGGTGGAGGT  >  NC_000913/3890019‑3890313
                                                                                                                                                  |                                                                                                                                                    
 caTATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATaa                                                                                                                                                   <  4:271059/149‑1 (MQ=255)
 caTATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATaa                                                                                                                                                   <  4:178821/149‑1 (MQ=255)
    atGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGa                                                                                                                                                <  4:569011/149‑1 (MQ=255)
     tGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGAt                                                                                                                                               <  3:514832/149‑1 (MQ=255)
       gACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGt                                                                                                                                             <  4:522666/149‑1 (MQ=255)
       gACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGt                                                                                                                                             >  2:417382/1‑149 (MQ=255)
        aCTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTt                                                                                                                                            >  2:130990‑M2/1‑148 (MQ=255)
        aCTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTt                                                                                                                                            <  2:154582‑M2/149‑2 (MQ=255)
         cTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTta                                                                                                                                           >  4:454981‑M2/1‑147 (MQ=255)
         cTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTta                                                                                                                                           >  4:120400‑M2/1‑147 (MQ=255)
          ttCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTtag                                                                                                                                          <  4:16754‑M2/149‑4 (MQ=255)
           tCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTtagc                                                                                                                                         <  4:217755‑M2/149‑5 (MQ=255)
             attattGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTtagcca                                                                                                                                       <  4:42808‑M2/149‑7 (MQ=255)
              ttattGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTtagccac                                                                                                                                      <  4:259167‑M2/149‑8 (MQ=255)
                  tGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCActctc                                                                                                                                  <  4:382147/149‑1 (MQ=255)
                    aaGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCtt                                                                                                                                >  3:358763/1‑149 (MQ=255)
                     aGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTa                                                                                                                               <  3:259167/149‑1 (MQ=255)
                      gCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTAc                                                                                                                              >  3:217583/1‑149 (MQ=255)
                        cTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTAccc                                                                                                                            >  2:500385/1‑149 (MQ=255)
                         tttAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCt                                                                                                                           >  1:564337/1‑149 (MQ=255)
                                   tgAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCaa                                                                                                                 <  2:212025/149‑1 (MQ=255)
                                    gAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAAt                                                                                                                >  3:162678/1‑149 (MQ=255)
                                     aaaGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATa                                                                                                               <  2:513580/149‑1 (MQ=255)
                                      aaGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATaa                                                                                                              <  4:326407/149‑1 (MQ=255)
                                        gagaACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACa                                                                                                            >  3:175971/1‑149 (MQ=255)
                                              gcggcgAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATa                                                                                                      <  2:331098/149‑1 (MQ=255)
                                              gcggcgAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATa                                                                                                      <  3:453406/149‑1 (MQ=255)
                                               cggcgAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAg                                                                                                     <  4:162678/149‑1 (MQ=255)
                                                   gAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCtt                                                                                                 >  4:410983/1‑149 (MQ=255)
                                                    aaTATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTc                                                                                                <  1:244237/149‑1 (MQ=255)
                                                      tatTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCct                                                                                              <  3:217755/149‑1 (MQ=255)
                                                       atTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGcc                                                                                                   <  2:40023/143‑1 (MQ=255)
                                                       atTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGcc                                                                                                   >  1:40023/1‑143 (MQ=255)
                                                        ttAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCctct                                                                                            >  3:38233/1‑149 (MQ=255)
                                                        ttAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCctct                                                                                            >  3:172234/1‑149 (MQ=255)
                                                           aaGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTaaa                                                                                         >  4:184868/1‑149 (MQ=255)
                                                           aaGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTaaa                                                                                         >  3:198897/1‑149 (MQ=255)
                                                           aaGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGCTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTaaa                                                                                         >  4:182726/1‑149 (MQ=255)
                                                            aGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTCCATCCTCAATAACAAAAATAGCCTTCCTCTAAAg                                                                                        <  1:206387/149‑1 (MQ=255)
                                                              gATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGt                                                                                      <  3:129521/149‑1 (MQ=255)
                                                                    ccTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatc                                                                                >  3:121345/1‑149 (MQ=255)
                                                                     cTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGcatca                                                                               >  3:558329/1‑149 (MQ=255)
                                                                            tacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTAacatccttatagccactctgta                                                                                                                                >  1:296021‑M1/1‑71 (MQ=255)
                                                                            tacgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTAacatccttatagccactctgta                                                                                                                                <  2:296021‑M1/93‑23 (MQ=255)
                                                                             acgAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTtagcca                                                                                                                                       >  4:40170‑M2/1‑79 (MQ=255)
                                                                             acgAACCGAAAGTATTGCGTCACTTCACCGCAAAACCTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTtagcca                                                                                                                                       <  3:40170‑M2/85‑7 (MQ=255)
                                                                                aaCCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCaa                                                                    <  4:217583/149‑1 (MQ=255)
                                                                                   cGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCt                                                                 <  4:74524/149‑1 (MQ=255)
                                                                                    gAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTg                                                                >  3:54877/1‑149 (MQ=255)
                                                                                    gAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTg                                                                >  3:501966/1‑149 (MQ=255)
                                                                                    gAAAGTATTGCGTCACTCCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCGCTCTCTTACCCGACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTg                                                                >  2:426055/1‑149 (MQ=255)
                                                                                     aaaGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGa                                                               >  1:557739/1‑149 (MQ=255)
                                                                                            tGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAg                                                        <  4:261249/149‑1 (MQ=255)
                                                                                               gTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCAc                                                     >  1:17188/1‑149 (MQ=255)
                                                                                                tCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCAct                                                    >  3:111532/1‑149 (MQ=255)
                                                                                                 cACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCActc                                                   >  3:502089/1‑149 (MQ=255)
                                                                                                    ttCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGc                                                >  2:311345/1‑149 (MQ=255)
                                                                                                    ttCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGc                                                >  4:209155/1‑149 (MQ=255)
                                                                                                    ttCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGc                                                >  2:428199/1‑149 (MQ=255)
                                                                                                          gCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTg                                          <  3:184868/149‑1 (MQ=255)
                                                                                                           cAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTgg                                         <  4:558329/149‑1 (MQ=255)
                                                                                                            aaaaCTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTggg                                        <  3:257440/149‑1 (MQ=255)
                                                                                                             aaaCTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTgggg                                       >  2:583880/1‑149 (MQ=255)
                                                                                                                cTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGgtgt                                    >  3:246396/1‑149 (MQ=255)
                                                                                                                 ttAAGGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGACATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGtt                                   >  1:506640/1‑149 (MQ=255)
                                                                                                                 ttAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGtt                                   >  4:51440/1‑149 (MQ=255)
                                                                                                                     agaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATgg                               <  4:38233/149‑1 (MQ=255)
                                                                                                                     agaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATgg                               >  1:196357/1‑149 (MQ=255)
                                                                                                                     agaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCGCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATgg                               <  1:238636/149‑1 (MQ=255)
                                                                                                                     agaagTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACACTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTAGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATgg                               <  3:409360/149‑1 (MQ=255)
                                                                                                                          tttAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTtata                          <  1:79760/149‑1 (MQ=255)
                                                                                                                          tttAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTtata                          <  4:111532/149‑1 (MQ=255)
                                                                                                                             aattaatACTACAGAGTGGCTATAAGGATGTTAGCCCCTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCa                       <  2:520860/149‑1 (MQ=255)
                                                                                                                              attaatACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACaa                                                                                                           <  3:180001/64‑1 (MQ=255)
                                                                                                                              attaatACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACaa                                                                                                           >  4:180001/1‑64 (MQ=255)
                                                                                                                              attaatACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAg                      <  4:175971/149‑1 (MQ=255)
                                                                                                                               ttaatACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAgg                     <  4:406698/149‑1 (MQ=255)
                                                                                                                                      tacAGAGTGGCTATAAGGATGTtagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgta                                                                      >  1:296021‑M2/1‑22 (MQ=255)
                                                                                                                                      tacAGAGTGGCTATAAGGATGTtagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgta                                                                      <  2:296021‑M2/93‑72 (MQ=255)
                                                                                                                                         agagTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAGGTACAGTAAtt           <  4:198897/149‑1 (MQ=255)
                                                                                                                                            gTGGCTAacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataa        <  4:259167‑M1/149‑143 (MQ=255)
                                                                                                                                            gTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGAt                                                                       >  1:376248/1‑86 (MQ=255)
                                                                                                                                            gTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGAt                                                                       <  2:376248/86‑1 (MQ=255)
                                                                                                                                            gTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATc                                                                      <  1:360275/87‑1 (MQ=255)
                                                                                                                                            gTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATc                                                                      >  2:360275/1‑87 (MQ=255)
                                                                                                                                            gTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCa                                                      >  3:113466/1‑103 (MQ=255)
                                                                                                                                            gTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCa                                                      <  4:113466/103‑1 (MQ=255)
                                                                                                                                            gTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAGGTACAGTAATtggt        <  3:89066/149‑1 (MQ=255)
                                                                                                                                             tGGCTAacatccttatagccactctgtagtattaattaaacttctttaggttttgcggtgaagtgacgcaatactttcggttcgt                                                                       <  3:40170‑M1/85‑80 (MQ=255)
                                                                                                                                             tGGCTAacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataat       <  4:42808‑M1/149‑144 (MQ=255)
                                                                                                                                             tGGCTAacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgt                                                                       >  4:40170‑M1/1‑6 (MQ=255)
                                                                                                                                              ggCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAGGTACAGTAATtggtgg      <  3:209155/149‑1 (MQ=255)
                                                                                                                                               gCTAacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataatga     <  4:217755‑M1/149‑146 (MQ=255)
                                                                                                                                               gCTATAAGGATGTtagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataatga     <  1:457516‑M2/149‑137 (MQ=255)
                                                                                                                                                cTAacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataatgaa    <  4:16754‑M1/149‑147 (MQ=255)
                                                                                                                                                 tAacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataatgaag   >  4:454981‑M1/1‑2 (MQ=255)
                                                                                                                                                 tAacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataatgaag   >  4:120400‑M1/1‑2 (MQ=255)
                                                                                                                                                  ataAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAGGTACAGTAATTGGTGGAGGt  >  3:465550/1‑149 (MQ=255)
                                                                                                                                                  aacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataatgaagt  >  2:130990‑M1/1‑1 (MQ=255)
                                                                                                                                                  aacatccttatagccactctgtagtattaattaaacttctttaagttttgcggtgaagtgacgcaatactttcggttcgtacgtaaaggttaatcctttaatattcgccgcgttctctttcacatgtttaaaggcttcaataatgaagt  <  2:154582‑M1/149‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
ACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCTAAAGGTGGCATCATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAGGTACAGTAATTGGTGGAGGT  >  NC_000913/3890019‑3890313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.