New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 392222876 (1.170)3 (0.050) 3/250 NT 3.8% coding (213/381 nt) atpI ATP synthase, membrane‑bound accessory factor
?NC_000913 = 3922232 77 (1.240)coding (209/381 nt) atpI ATP synthase, membrane‑bound accessory factor
Rejected: Frequency below/above cutoff threshold.

CAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCTATC  >  NC_000913/3922090‑3922375
                                                                                                                                          |                                                                                                                                                   
cAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCgggtggcctg                                                                                                                                           <  2:99460‑M1/149‑11 (MQ=255)
 aGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCttt                                                                                                                                          >  1:216797/1‑149 (MQ=255)
        gAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgt                                                                                                                                   >  3:326252/1‑149 (MQ=255)
        gAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgt                                                                                                                                   <  3:413670/149‑1 (MQ=255)
         aaCCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGgtg                                                                                                                                  <  2:41360/149‑1 (MQ=255)
            caccaGCACCAAAATCCACGTAACGATCAGCGGCAAGATTACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACATTGAAAGCTACGCCAAATACGAAGGTCCAGGCCACCCGGCCTTTCGCTGGTGTAt                                                                                                                               >  2:320690/1‑149 (MQ=255)
            caccaGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTAt                                                                                                                               <  3:287018/149‑1 (MQ=255)
                aGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATgcgc                                                                                                                           >  3:165354/1‑149 (MQ=255)
                  cACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCt                                                                                                                         <  4:253538/149‑1 (MQ=255)
                    ccAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTgg                                                                                                                       <  4:1881/149‑1 (MQ=255)
                    ccAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTgg                                                                                                                       >  4:365990/1‑149 (MQ=255)
                     cAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGt                                                                                                                      >  3:382502/1‑149 (MQ=255)
                     cAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGt                                                                                                                      >  1:370208/1‑149 (MQ=255)
                      aaaaCCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTg                                                                                                                     <  3:485831/149‑1 (MQ=255)
                          cccACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGc                                                                                                                 <  3:9589/149‑1 (MQ=255)
                          cccACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGc                                                                                                                 <  4:582719/149‑1 (MQ=255)
                           ccACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGcc                                                                                                                >  3:57511/1‑149 (MQ=255)
                             aCGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAg                                                                                                              >  1:347627/1‑149 (MQ=255)
                             aCGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAg                                                                                                              <  4:136196/149‑1 (MQ=255)
                             aCGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAg                                                                                                              >  1:176269/1‑149 (MQ=255)
                               gTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGc                                                                                                            >  1:151118/1‑149 (MQ=255)
                                    gATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAata                                                                                                       <  2:176269/149‑1 (MQ=255)
                                    gATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAata                                                                                                       >  3:144936/1‑149 (MQ=255)
                                           ggCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATaaa                                                                                                <  1:22512/149‑1 (MQ=255)
                                           ggCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATaaa                                                                                                <  1:164308/149‑1 (MQ=255)
                                              aaGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATaaa                                                                                                <  2:428002/146‑1 (MQ=255)
                                              aaGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATaaa                                                                                                >  1:428002/1‑146 (MQ=255)
                                                gAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACaaaa                                                                                           <  4:57511/149‑1 (MQ=255)
                                                      cGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAg                                                                                     >  2:191572/1‑149 (MQ=255)
                                                       gCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATaaa                                                                                                >  2:591904/1‑137 (MQ=255)
                                                       gCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATaaa                                                                                                <  1:591904/137‑1 (MQ=255)
                                                        ccTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGc                                                                                   >  3:174064/1‑149 (MQ=255)
                                                               aaCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGa                                                                            >  4:217263/1‑149 (MQ=255)
                                                                aCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAc                                                                           >  3:92266/1‑149 (MQ=255)
                                                                aCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAc                                                                           >  3:523409/1‑149 (MQ=255)
                                                                aCCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGAc                                                                           <  4:78139/149‑1 (MQ=255)
                                                                  cGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTg                                                                         >  2:588913/1‑149 (MQ=255)
                                                                   gCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGc                                                                        <  4:245950/149‑1 (MQ=255)
                                                                        cGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGc                                                                   <  2:432620/149‑1 (MQ=255)
                                                                         gCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGcc                                                                  >  4:253980/1‑149 (MQ=255)
                                                                           caccaccaGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGcccc                                                                >  3:55223/1‑149 (MQ=255)
                                                                               accaGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCt                                                            <  2:347627/149‑1 (MQ=255)
                                                                                 caGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTa                                                          >  4:278480/1‑149 (MQ=255)
                                                                                 caGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTa                                                          >  3:544617/1‑149 (MQ=255)
                                                                                 caGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTa                                                          <  4:144936/149‑1 (MQ=255)
                                                                                 caGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTa                                                          <  1:588913/149‑1 (MQ=255)
                                                                                   gTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTa                                                                                      >  2:23357/1‑119 (MQ=255)
                                                                                   gTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTa                                                                                      <  1:23357/119‑1 (MQ=255)
                                                                                   gTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAtt                                                        <  3:400388/149‑1 (MQ=255)
                                                                                        acCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCaga                                                   >  3:483165/1‑149 (MQ=255)
                                                                                          cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAtt                                                        >  4:498770/1‑142 (MQ=255)
                                                                                          cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAtt                                                        <  3:498770/142‑1 (MQ=255)
                                                                                          cAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCCGCCTTTCGCTTGTGTATGCGCCTGGTGACGCCAGGCAAATCTCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAgaga                                                 >  4:469193/1‑149 (MQ=255)
                                                                                            aCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCGGGTggcctggacatt                                                                                                                                     <  1:134425‑M2/63‑13 (MQ=255)
                                                                                            aCATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCGGGTggcctggacatt                                                                                                                                     >  2:134425‑M2/1‑51 (MQ=255)
                                                                                               tCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGccc                                            <  3:278480/149‑1 (MQ=255)
                                                                                               tCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGccc                                            >  4:173438/1‑149 (MQ=255)
                                                                                                   cAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGa                                        >  3:211492/1‑149 (MQ=255)
                                                                                                     gAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAg                                      <  3:94421/149‑1 (MQ=255)
                                                                                                      aaCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAtt                                                        >  4:40128/1‑130 (MQ=255)
                                                                                                      aaCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTAtt                                                        <  3:40128/130‑1 (MQ=255)
                                                                                                      aaCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAgg                                     <  1:320690/149‑1 (MQ=255)
                                                                                                       aCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAggg                                    <  4:425073/149‑1 (MQ=255)
                                                                                                       aCTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAggg                                    <  4:256161/149‑1 (MQ=255)
                                                                                                            gAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGTCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCtt                               <  4:174064/149‑1 (MQ=255)
                                                                                                            gAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGTGGTCtt                               <  2:211069/149‑1 (MQ=255)
                                                                                                             aaaGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCttt                              <  4:150801/149‑1 (MQ=255)
                                                                                                               aGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGa                            <  3:203048/149‑1 (MQ=255)
                                                                                                                gCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAg                           >  1:497927/1‑149 (MQ=255)
                                                                                                                 cTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAgg                          >  4:418504/1‑149 (MQ=255)
                                                                                                                   tCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCt                        <  1:241185/149‑1 (MQ=255)
                                                                                                                    cGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTg                       <  2:155410/149‑1 (MQ=255)
                                                                                                                       cAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAAc                    >  4:449662/1‑149 (MQ=255)
                                                                                                                          aTGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGc                 >  2:297662/1‑149 (MQ=255)
                                                                                                                           tGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAgaa                >  4:205340/1‑147 (MQ=255)
                                                                                                                            gCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCaa               <  3:315669/149‑1 (MQ=255)
                                                                                                                               aaTGTCCAGGCCacccggcctggacattcgcatttggcgaagctttcaaagttctggcgatgt                                                                                                  <  1:134425‑M1/63‑52 (MQ=255)
                                                                                                                               aaTGTCCAGGCCacccggcctggacattcgcatttggcgaagctttcaaagttctggcgatgt                                                                                                  >  2:134425‑M1/1‑12 (MQ=255)
                                                                                                                               aaTGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATcc            <  2:497927/149‑1 (MQ=255)
                                                                                                                                  gTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACt         <  4:326252/149‑1 (MQ=255)
                                                                                                                                   tCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCAAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACtt        <  4:7533/149‑1 (MQ=255)
                                                                                                                                     cAGGCCACCCggcctggacattcgcatttggcgaagctttcaaagttctggcgatgttggtgttactggtggtggcgttggcggttttaaaggcggtattcttgccgctgatcgttacgtgggttttggtgctggtggttcagatactg      <  2:99460‑M2/149‑140 (MQ=255)
                                                                                                                                      aGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCt     >  2:211380/1‑149 (MQ=255)
                                                                                                                                         ccACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCTATc  <  4:92266/149‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                                   
CAGTATCTGAACCACCAGCACCAAAACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCTATC  >  NC_000913/3922090‑3922375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.