New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 854789	53 (0.820)	3 (0.050)	3/240	NT	5.4%	intergenic (+24/+35)	ybiR/ldtB	putative transporter/L,D‑transpeptidase linking Lpp to murein
	?	NC_000913	= 854796	57 (0.950)					intergenic (+31/+28)	ybiR/ldtB	putative transporter/L,D‑transpeptidase linking Lpp to murein

TATGGCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAATTGGCACA  >  NC_000913/854654‑854941                                                                                                                                                |                                                                                                                                                  tATGGCGAACGATCGCCGCATCTGGTAGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGtccgcc                                                                                                                                             <  4:283746‑M2/149‑7 (MQ=255)    ggCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGtccgccttt                                                                                                                                          <  3:159430‑M2/149‑10 (MQ=255)     gCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGtccgcctttt                                                                                                                                         >  2:355939‑M2/1‑139 (MQ=255)      cGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTg                                                                                                                                        <  1:424938/149‑1 (MQ=255)        aaCGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCt                                                                                                                                      >  3:416749/1‑149 (MQ=255)        aaCGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCATTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCt                                                                                                                                      <  1:46657/149‑1 (MQ=255)            aTCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTaa                                                                                                                                  <  3:425462/149‑1 (MQ=255)               gccgcATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGtt                                                                                                                               >  3:442646/1‑149 (MQ=255)                    aTCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGaa                                                                                                                          <  2:80485/149‑1 (MQ=255)                        ggtggCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGAtt                                                                                                                      <  3:406401/149‑1 (MQ=255)                         gtggCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTa                                                                                                                     >  4:306689/1‑149 (MQ=255)                          tggCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTaa                                                                                                                    <  4:416749/149‑1 (MQ=255)                            gCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTaa                                                                                                                                  >  3:557691/1‑133 (MQ=255)                            gCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTaa                                                                                                                                  <  4:557691/133‑1 (MQ=255)                            gCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAAtt                                                                                                                  <  1:87901/149‑1 (MQ=255)                              gTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCa                                                                                                                <  4:159430/149‑1 (MQ=255)                                ttCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGa                                                                                                              <  3:365460/149‑1 (MQ=255)                                    aTCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGaa                                                                                                          >  2:72134/1‑149 (MQ=255)                                      ctctATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAAcc                                                                                                        >  1:580429/1‑149 (MQ=255)                                         tATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAGGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGc                                                                                                     >  2:534255/1‑149 (MQ=255)                                          aTTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAAGTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCTTTTTGCTTTAAGTTTTGAGGGTTAATTCAGACGAACAGGCa                                                                                                    >  1:567093/1‑149 (MQ=255)                                           ttCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGAc                                                                                                             >  4:192170/1‑139 (MQ=255)                                           ttCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGAc                                                                                                             <  3:192170/139‑1 (MQ=255)                                              aaTACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATccc                                                                                                >  2:468504/1‑149 (MQ=255)                                               aTACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCTGCATCCCg                                                                                               >  2:556793/1‑149 (MQ=255)                                                 aCCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGa                                                                                             <  4:446148/149‑1 (MQ=255)                                                     aTGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCgg                                                                                         >  3:342429/1‑149 (MQ=255)                                                        cTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGttt                                                                                      <  3:54925/149‑1 (MQ=255)                                                         tgttgtGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGtttt                                                                                     <  4:164406/149‑1 (MQ=255)                                                           ttgtGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGACTCAT‑AAtccgccttttttatttgcca                                                                                                                               <  3:526476‑M2/105‑21 (MQ=255)                                                           ttgtGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGACT‑CATAAtccgccttttttatttgcca                                                                                                                               >  4:526476‑M2/1‑85 (MQ=255)                                                            tgtgGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGCCAACTAAACAATGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTaa                                                                                  <  2:426557/149‑1 (MQ=255)                                                             gtgGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAAt                                                                                 <  2:378294/149‑1 (MQ=255)                                                              tgGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATc                                                                                <  2:142980/149‑1 (MQ=255)                                                                  cggcgTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCtt                                                                            >  3:132800/1‑149 (MQ=255)                                                                   ggcgTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTtc                                                                           <  3:6827/149‑1 (MQ=255)                                                                       ttGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTtcatca                                                                       >  4:127228/1‑149 (MQ=255)                                                                           tggGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGaa                                                                   <  3:283746/149‑1 (MQ=255)                                                                             ggATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGaaca                                                                 >  3:334266/1‑149 (MQ=255)                                                                             ggATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGaaca                                                                 >  4:239697/1‑149 (MQ=255)                                                                               atatGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGaacaac                                                               <  2:191851/149‑1 (MQ=255)                                                                               atatGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGaacaac                                                               >  2:326538/1‑149 (MQ=255)                                                                                 atGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCTGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCt                                                             <  1:556793/149‑1 (MQ=255)                                                                                  tGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTg                                                            <  1:556208/149‑1 (MQ=255)                                                                                   gTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTgg                                                           >  1:117380/1‑149 (MQ=255)                                                                                       tGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAGGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCaa                                                       <  1:534255/149‑1 (MQ=255)                                                                                            gttaTACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCt                                                  <  4:352159/149‑1 (MQ=255)                                                                                             ttaTACTCCCTGCCAACTAGGGCCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTg                                                 >  2:545077/1‑149 (MQ=255)                                                                                               ataCTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGaa                                                                                                                          <  4:85088/74‑1 (MQ=255)                                                                                               ataCTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGaa                                                                                                                          >  3:85088/1‑74 (MQ=255)                                                                                                   tCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGAc                                           >  2:39900/1‑149 (MQ=255)                                                                                                        gCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTc                                      <  3:306689/149‑1 (MQ=255)                                                                                                           aaCTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACt                                   <  2:580429/149‑1 (MQ=255)                                                                                                                   tCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCAc                           <  4:269966/149‑1 (MQ=255)                                                                                                                        cAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGctct                      <  3:167708/149‑1 (MQ=255)                                                                                                                              aaaaaGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCa                <  4:530518/149‑1 (MQ=255)                                                                                                                                aaaGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAgg              >  2:152068/1‑149 (MQ=255)                                                                                                                                aaaGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAgg              <  4:334266/149‑1 (MQ=255)                                                                                                                                  aGGCGGATT‑ATGAGtccgccttttttatttgccagaccctagttggccgggagtataactaacaaaacatatcccaccaacgccgcccacaacagcatcggtattgaatagagatggaaacgccaccagatgcggcgatcgttcgccat            <  1:472460‑M2/149‑136 (MQ=255)                                                                                                                                      ggATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCtt                     <  1:171414/136‑1 (MQ=255)                                                                                                                                      ggATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCtt                     >  2:171414/1‑136 (MQ=255)                                                                                                                                      ggATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAAtt        >  4:513352/1‑149 (MQ=255)                                                                                                                                      ggATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAAtt        <  4:278254/149‑1 (MQ=255)                                                                                                                                         tt‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAAtt        <  2:411735/146‑1 (MQ=255)                                                                                                                                         tt‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAAtt        >  1:411735/1‑146 (MQ=255)                                                                                                                                          t‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAATTGGca    <  4:342429/149‑1 (MQ=255)                                                                                                                                            aTGAGGCCGCTTTTTGCTTTAAATTTTGAAGATTAATTCAGGCGAACCTGCATCCCGGGGCGGTTTTTATTCGCTTCATCAAGAACAACCTGTTCAACATTTGTCTGACCGGTTACCGGCTGCACGCTCTTCGTCAGGGTAATTGGcac   <  2:567093/149‑1 (MQ=255)                                                                                                                                             tGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAATTGGcaca  >  3:317308/1‑149 (MQ=255)                                                                                                                                             tGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAATTGGcaca  >  3:428339/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                  TATGGCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAGGGTCTGGCAAATAAAAAAGGCGGATT‑ATGAGTCCGCCTTTTGCTTTAAGTTTTGAAGATTAATTCAGACGAACCGGCATCCCGGAGCGGTTTTTAATCGCTTCATCAAGAACAACCTGGTCAACATCTGGCTGACCGGTCACTGTCTGCACGCTCTTCGTCAGGGTAATTGGCACA  >  NC_000913/854654‑854941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.