| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,884,567 | C→A | 5.6% | A885S (GCA→TCA) | ygcB ← | Cascade complex anti‑viral R‑loop helicase‑annealase Cas3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,884,567 | 0 | C | A | 5.6% | 255.0 / 4.7 | 72 | A885S (GCA→TCA) | ygcB | Cascade complex anti‑viral R‑loop helicase‑annealase Cas3 |
| Reads supporting (aligned to +/- strand): ref base C (35/33); new base A (2/2); total (37/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.60e-01 | |||||||||||
AATATTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGT > NC_000913/2884419‑2884714 | aaTATTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGc < 4:283904/149‑1 (MQ=255) atatTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGGTTTGCa < 4:467898/149‑1 (MQ=255) tatTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAg < 3:424911/149‑1 (MQ=255) atTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAgg < 2:251201/149‑1 (MQ=255) atTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAgg < 3:560325/149‑1 (MQ=255) ttCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAggg < 3:481110/149‑1 (MQ=255) tCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGACGATGTACATTGTGCACCTTCCCTACTTAAGTAAGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGCTTTGCAGGGa < 4:380302/149‑1 (MQ=255) cATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGAt < 1:300511/149‑1 (MQ=255) aTACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATg > 3:279075/1‑149 (MQ=255) tgAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTg < 3:364962/149‑1 (MQ=255) aaTGTAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGt > 3:551704/1‑149 (MQ=255) atatAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTc < 4:279075/149‑1 (MQ=255) tataAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCa > 1:130641/1‑149 (MQ=255) aaaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATccc < 3:434319/149‑1 (MQ=255) aaacgtagtttttctgaagtagtagatgaagatgggttactttggctggaagggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑Tcc > 4:425841‑M1/113‑149 (MQ=255) ccGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCt < 2:102531/149‑1 (MQ=255) cGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTg > 4:32050/1‑149 (MQ=255) gggAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGt > 2:518510/1‑149 (MQ=255) ttAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGt < 1:546069/149‑1 (MQ=255) ttAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGACAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGt > 3:192174/1‑149 (MQ=255) agaagaTGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGACAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGtaataa < 4:192174/149‑1 (MQ=255) aTGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGTGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATa > 4:550448/1‑149 (MQ=255) tgtgCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTAcc < 2:18389/149‑1 (MQ=255) agatgggttactttggctggaagggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGATTTGCAg < 2:232121‑M1/11‑1 (MQ=255) agatgggttactttggctggaagggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGATTTGCAg > 1:232121‑M1/84‑94 (MQ=255) tgCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCt > 3:273201/1‑149 (MQ=255) cACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGc > 1:149804/1‑149 (MQ=255) aCCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGcc > 3:35346/1‑149 (MQ=255) ccTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTc > 3:297721/1‑102 (MQ=255) ccTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTc < 4:297721/102‑1 (MQ=255) ttCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGa < 4:273201/149‑1 (MQ=255) tCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGAc > 3:121545/1‑149 (MQ=255) cTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACcca > 3:65692/1‑149 (MQ=255) ttAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACaa > 3:566216/1‑123 (MQ=255) ttAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACaa < 4:566216/123‑1 (MQ=255) gTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACt > 1:25567/1‑123 (MQ=255) gTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACt < 2:25567/123‑1 (MQ=255) aGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGa > 2:521650/1‑149 (MQ=255) aGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGa > 3:126439/1‑149 (MQ=255) aacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGAT‑‑GAAGGGATGACTCTGGTCATccc < 2:496943‑M1/28‑1 (MQ=255) aacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGAT‑‑GAAGGGATGACTCTGGTCATccc > 1:496943‑M1/58‑85 (MQ=255) aTAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCt > 4:101303/1‑149 (MQ=255) aTAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCt > 3:505791/1‑149 (MQ=255) aaaCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGt < 1:156442/103‑1 (MQ=255) aaaCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGt < 1:161906/149‑1 (MQ=255) aaaCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGt < 2:174345/149‑1 (MQ=255) aaaCCGTTATCGGTCTTATTATCGACATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGt > 2:156442/1‑103 (MQ=255) aCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCGCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGttt > 2:339555/1‑149 (MQ=255) ccGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTc < 4:505791/149‑1 (MQ=255) gTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTccc < 4:223358/149‑1 (MQ=255) tGGTCTTATTATCGTCATTGAGAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCa < 4:551704/149‑1 (MQ=255) gTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGc > 1:423978/1‑149 (MQ=255) ttattaTCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCaa < 4:65692/149‑1 (MQ=255) atCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTaa < 2:130641/149‑1 (MQ=255) tCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAc > 3:224877/1‑149 (MQ=255) tCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCa > 1:266913/1‑149 (MQ=255) tCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCa > 2:262893/1‑149 (MQ=255) aTAACAATTATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCa > 3:567310/1‑149 (MQ=255) acagtattgttattacctatacagGGGAT‑‑GAAGGGATGACCAGAGTCATCCCTGCAAATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCt > 1:259859‑M1/25‑124 (MQ=255) acagtattgttattacctatacagGGGAT‑‑GAAGGGATGACCAGAGTCATCCCTGCAAATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCt < 2:259859‑M1/100‑1 (MQ=255) aaTCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctac > 1:211565/1‑149 (MQ=255) aaTCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctac > 2:323616/1‑149 (MQ=255) aaTCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctac > 1:120685/1‑149 (MQ=255) tCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctacta < 4:121545/149‑1 (MQ=255) tCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctacta > 1:65711/1‑149 (MQ=255) aTTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTactact > 2:259460/1‑149 (MQ=255) tCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTc < 3:496308/149‑1 (MQ=255) ccGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAg > 4:50864/1‑149 (MQ=255) aTTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTa < 1:400010/149‑1 (MQ=255) tGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGt < 2:423978/149‑1 (MQ=255) ATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTcc > 2:266913‑M1/1‑149 (MQ=255) ttGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAg < 4:155217/149‑1 (MQ=255) gCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGt < 4:35346/149‑1 (MQ=255) | AATATTCATACTGTGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCA‑‑TCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGT > NC_000913/2884419‑2884714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |