New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620112NA (NA)6 (0.060) 6/248 NT 100% coding (921/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620151 0 (0.000)coding (960/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAA  >  NC_000913/3619998‑3620259
                                                                                                                  |                                                                                                                                                   
aCCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCAC                                                                                                                   <  4:336703‑M2/149‑1 (MQ=255)
 ccGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACG                                                                                                                  <  4:597267‑M2/149‑1 (MQ=255)
   gTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                                                                >  3:715715‑M2/1‑149 (MQ=255)
    tCCGCTTTTCCTGATACCCTGCCGGGTTACGCCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               <  4:417240‑M2/149‑1 (MQ=255)
    tCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               <  4:683091‑M2/149‑1 (MQ=255)
    tCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                                                                >  2:883282‑M2/1‑148 (MQ=255)
     ccGCTTTTCCTGATACCCTGCTGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTATGTCTGCCGTGTGGCTGACGCACGTCCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTAGTGCGCTATGGCTGGACGCCACGCGGC                                                                                                              >  3:510671‑M2/1‑149 (MQ=255)
     ccGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGC                                                                                                              >  3:868555‑M2/1‑149 (MQ=255)
     ccGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               <  2:371249‑M2/148‑1 (MQ=255)
     ccGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               <  2:666382‑M2/148‑1 (MQ=255)
     ccGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               <  2:883712‑M2/148‑1 (MQ=255)
     ccGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               <  1:117528‑M2/148‑1 (MQ=255)
     ccGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               >  1:394374‑M2/1‑148 (MQ=255)
      cGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGC                                                                                                              >  2:182168‑M2/1‑148 (MQ=255)
                 aTACGCTGCCGGGTTACACCGAATATGGCCGGTACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               <  1:277522‑M2/136‑1 (MQ=255)
                 aTACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                                                               >  2:277522‑M2/1‑136 (MQ=255)
                                                                                tGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCAC                                                                                                                   <  4:802347‑M2/69‑1 (MQ=255)
                                                                                tGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCAC                                                                                                                   >  3:802347‑M2/1‑69 (MQ=255)
                                                                                                                 cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCaggtaaattctccgggtattccgggtcgtgcgtcagccacacggc                                                                 >  4:176694‑M2/1‑41 (MQ=255)
                                                                                                                 cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCaggtaaattctccgggtattccgggtcgtgcgtcagccacacggc                                                                 <  3:176694‑M2/86‑46 (MQ=255)
                                                                                                                  tGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatgccgttgtcccggccatattcggtgtaacccggcagggcatcaggaaaagc  <  1:568900‑M2/148‑109 (MQ=255)
                                                                                                                  |                                                                                                                                                   
ACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAA  >  NC_000913/3619998‑3620259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.