| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 647,575 | A→C | 5.2% | V154G (GTC→GGC) | citX ← | apo‑citrate lyase phosphoribosyl‑dephospho‑CoA transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 647,575 | 0 | A | C | 5.2% | 330.2 / 7.8 | 96 | V154G (GTC→GGC) | citX | apo‑citrate lyase phosphoribosyl‑dephospho‑CoA transferase |
| Reads supporting (aligned to +/- strand): ref base A (35/56); new base C (3/2); total (38/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
CGCCAGCCCAGCAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGC > NC_000913/647430‑647721 | cgcCAGCCCAGCAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACg < 2:682278/148‑1 (MQ=255) ccagcAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTgcgc > 2:235871/1‑148 (MQ=255) agcagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCtt < 2:187517/148‑1 (MQ=255) agcagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCtt < 2:256184/148‑1 (MQ=255) agcagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCtt < 2:798816/148‑1 (MQ=255) agcagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCtt < 2:804355/148‑1 (MQ=255) cagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGCCGTCTgcgcgcgtg < 3:909513/149‑6 (MQ=255) cagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGt < 3:892838/149‑1 (MQ=255) cagGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGt > 3:819866/1‑149 (MQ=255) agGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGt < 1:703257/148‑1 (MQ=255) gggCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGtt < 1:235871/148‑1 (MQ=255) gggCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGtt < 1:925765/148‑1 (MQ=255) gggCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTc < 3:504186/149‑1 (MQ=255) ggCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTc > 1:794743/1‑148 (MQ=255) aCTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCacaa < 3:310564/149‑1 (MQ=255) cTCATCGATTAATGACGTCGCGAGCTTTGTGGTTTTGGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCacaac < 3:17611/149‑1 (MQ=255) aTCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAgg > 3:172218/1‑149 (MQ=255) aTCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAgg > 3:894983/1‑149 (MQ=255) cGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGc > 1:197613/1‑148 (MQ=255) aaTGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAgcggc < 3:744164/149‑1 (MQ=255) cGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAggc < 3:175868/149‑1 (MQ=255) cGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAgg < 2:476220/148‑1 (MQ=255) cGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAgg > 1:595444/1‑148 (MQ=255) gCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAggcggc < 2:250794/148‑1 (MQ=255) cAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCa > 1:300092/1‑148 (MQ=255) gCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGa < 4:408848/149‑1 (MQ=255) cTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCAAAACAGGCAGCGGCGAGGCGGCAGTGa < 2:197613/148‑1 (MQ=255) ttGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGTGAGGCGGCAGTGAAt < 1:320621/148‑1 (MQ=255) ttGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATa < 4:289145/149‑1 (MQ=255) ttGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATa < 3:320674/149‑1 (MQ=255) tgGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTc < 3:193424/149‑1 (MQ=255) gTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTcgc > 3:604744/1‑149 (MQ=255) ttttAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTcgcg > 3:497116/1‑149 (MQ=255) tAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCgcggc < 1:177034/148‑1 (MQ=255) aGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCgcggcg < 2:86993/148‑1 (MQ=255) gTTGACGTTGCAGGCATCGACATCGTTCATCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGCCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCggg > 3:777813/1‑149 (MQ=255) ttGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCggg > 2:18667/1‑148 (MQ=255) tGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGga > 1:851890/1‑148 (MQ=255) gACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCGGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGggga < 4:773742/149‑1 (MQ=255) aCGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGgaga < 2:478597/148‑1 (MQ=255) cGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGgagaga < 4:898012/149‑1 (MQ=255) gTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGaa > 3:403796/1‑149 (MQ=255) gTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCAGGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGgagaga < 1:344306/148‑1 (MQ=255) cAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAAttta < 4:194021/149‑2 (MQ=255) cAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTc < 3:393635/149‑1 (MQ=255) ggCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAAttt < 1:845119/146‑1 (MQ=255) ggCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAAttt > 2:845119/1‑146 (MQ=255) tCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCtt < 1:649191/148‑1 (MQ=255) cATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCggg < 1:816477/148‑1 (MQ=255) cATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCggg > 1:37020/1‑148 (MQ=255) tCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGc < 2:572244/139‑1 (MQ=255) tCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGc > 1:572244/1‑139 (MQ=255) tCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCg > 1:250087/1‑148 (MQ=255) cGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGt < 2:163551/148‑1 (MQ=255) gTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCa > 3:342675/1‑149 (MQ=255) ttCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCAACGCGCGCAGACGGCTGCGCGTTGTTCGCACAACAGGGAGCGGCGAGGCGGCAGTGAATAGTAGCGGCGGCAGAGAATTTCGCCTTCGGGCGTCAg < 4:831391/149‑1 (MQ=255) agTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGTATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATc < 3:545313/149‑1 (MQ=255) cTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGatat > 4:359936/1‑149 (MQ=255) ccATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATc > 2:426352/1‑148 (MQ=255) ccATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATc > 1:462642/1‑148 (MQ=255) cATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATccc > 3:628820/1‑149 (MQ=255) aggCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGGAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATccc < 1:296172/146‑1 (MQ=255) tGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCa > 1:624591/1‑148 (MQ=255) gCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCAt > 2:70576/1‑148 (MQ=255) aGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGccc < 3:156118/149‑1 (MQ=255) tAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCga < 3:57661/149‑1 (MQ=255) aaTCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCgaga < 3:636676/149‑1 (MQ=255) aaTCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCgaga < 4:497116/149‑1 (MQ=255) aaTCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCgag < 2:851890/148‑1 (MQ=255) aTCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCCTAACCGCCCGagag < 3:74256/149‑1 (MQ=255) ggTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGAt < 4:342675/149‑1 (MQ=255) gTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATg < 4:894983/149‑1 (MQ=255) aGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACt < 3:230204/149‑1 (MQ=255) aGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACt < 3:539002/149‑1 (MQ=255) gTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACGACAGGCAGCGTCGAggcgg < 1:832739/67‑1 (MQ=255) gTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACGACAGGCAGCGGCGAggcgg > 2:832739/1‑67 (MQ=255) tGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTAt < 1:966705/148‑1 (MQ=255) tGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATccc > 2:634645/1‑121 (MQ=255) tGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATccc < 1:634645/121‑1 (MQ=255) gggTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCg < 3:292486/98‑1 (MQ=255) gggTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCg > 4:292486/1‑98 (MQ=255) ggTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCaa > 3:567002/1‑149 (MQ=255) ggTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCa < 2:697207/148‑1 (MQ=255) ggTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCa < 2:634900/148‑1 (MQ=255) gTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGAc > 4:950452/1‑139 (MQ=255) gTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGAc < 3:950452/139‑1 (MQ=255) tCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGGATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCa > 2:162088/1‑148 (MQ=255) aacaaagcgcAGCCGTCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTAAGTTCAAGCTCaa > 1:44660/7‑148 (MQ=255) cACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAAtg > 3:125771/1‑149 (MQ=255) aCGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAAtg > 2:414546/1‑148 (MQ=255) aagcgcAGCCGTCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAAtggt > 2:414145/3‑148 (MQ=255) agcgcAGCCGTCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATg > 1:884111/2‑132 (MQ=255) agcgcAGCCGTCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATg < 2:884111/131‑1 (MQ=255) gcgcAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAAtggtgg < 1:758966/148‑1 (MQ=255) taGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGa > 1:456288/2‑148 (MQ=255) gACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGc > 1:47168/1‑148 (MQ=255) | CGCCAGCCCAGCAGGGCGTACTCATCGATTAATGACGTCGCAAGCTTTGTGGTTTTAGTTGACGTTGCAGGCATCGACATCGTTCAGCAGTGCCTCCATGCGGTTGAGTAAATCGGTCAGTTGATGGGTTTTTCCACGCGCGCAGACGGCTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGC > NC_000913/647430‑647721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |