BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3468351 =	109 (0.930)	10 (0.090)	9/248	NT	9.1%	coding (1503/2694 nt)	chiA	periplasmic endochitinase
*	?	NC_000913	3468373 =	96 (0.870)	10 (0.090)	9/248	NT	9.1%	coding (1481/2694 nt)	chiA	periplasmic endochitinase

Only 100 of 136 total aligned reads displayed.

TCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGTTCGTATTTCTTCCAC  >  NC_000913/3468203‑3468498

tctGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCg                                                                                                                                                     >  1:1016325/1‑149 (MQ=255)

tctGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCg                                                                                                                                                     >  1:338356/1‑149 (MQ=255)

  tGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGt                                                                                                                                                   >  3:14014/1‑149 (MQ=255)

  tGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGt                                                                                                                                                   >  1:503833/1‑149 (MQ=255)

   gagaAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTg                                                                                                                                                  >  4:896186/1‑149 (MQ=255)

   gagaAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTg                                                                                                                                                  <  1:559079/149‑1 (MQ=255)

    agaAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTgg                                                                                                                                                 >  3:394099/1‑149 (MQ=255)

     ccgggcggcgataacccgtggaagaaatacgaaccggcgaaagcatggtccgcatccactgtgtacgtgaaaggtgatcgcgttgttgttgatgggcaggcttatgaagcgctgttctggacgcaaagtgacaaccctgctctGGTGGc                                                                                                                                                <  3:778397‑M1/6‑1 (MQ=255)

      aaaTGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCg                                                                                                                                               >  3:748593/1‑149 (MQ=255)

         tGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGttt                                                                                                                                            >  2:853441/1‑149 (MQ=255)

           tAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTg                                                                                                                                          >  2:923624/1‑149 (MQ=255)

           tAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTg                                                                                                                                          <  2:599332/149‑1 (MQ=255)

           tAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTg                                                                                                                                          <  2:745215/149‑1 (MQ=255)

             gTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGt                                                                                                                                        <  2:740439/149‑1 (MQ=255)

             attCACACCGTTAAAGCGACTCCGCGTATCGCTGGACTAAAGCGTTTCTGCATTAAACTGCGGCGCATTATTCAGCTCTTAGTTGCTATAGCTCTGAGACTTACATAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGt                                                                                                                                        >  2:646424/2‑149 (MQ=255)

              gataacccgtggaagaaatacgaaccggcgaaagcatggtccgcatccactgtgtacgtgaaaggtgatcgcgttgttgttgatgggcaggcttatgaagcgctgttctggacgcaaagtgacaaccctgctctgg                                                                                                                                                    <  1:337899‑M1/2‑1 (MQ=255)

               tCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTc                                                                                                                                      <  3:758188/149‑1 (MQ=255)

                 acacCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGc                                                                                                                                    >  2:662139/1‑149 (MQ=255)

                 acacCGGTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGCTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGc                                                                                                                                    >  4:215023/1‑149 (MQ=255)

                 aaacCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTGTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGc                                                                                                                                    >  1:318594/3‑149 (MQ=255)

                   cccgtggaagaaatacgaaccggcgaaagcatggtccgcatccactgtgtacgtgaaaggtgatcgcgttgttgttgatgggcaggcttatgaagcgctgttctggacgcaaagtgacaaccctgctccGGTGGCGTTTTGGTTCGcca                                                                                                                                  <  1:649612‑M1/20‑1 (MQ=255)

                      gtggaagaaatacgaaccggcgaaagcatggtccgcatccactgtgtacgtgaaaggtgatcgcgttgttgttgatgggcaggcttatgaagcgctgttctggacgcaaagtgacaaccctgctctGGTGGCGTTTTGGTTCGccacca                                                                                                                               >  3:438187‑M1/127‑149 (MQ=255)

                      gTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGccacca                                                                                                                               <  3:868979/149‑1 (MQ=255)

                      gTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTCTCTGGATTAAACTGCGGCGCATTATTGAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCGATTGCTACCGGTGGCGTTTTGGTTCGccacca                                                                                                                               >  3:883100/1‑149 (MQ=255)

                        tAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCaga                                                                                                                             <  2:388142/149‑1 (MQ=255)

                        gaagaaatacgaaccggcgaaagcatggtccgcatccactgtgtacgtgaaaggtgatcgcgttgttgttgatgggcaggcttatgaagcgctgttctggacgcaaagtgacaaccctgctaccGGTGGCGTTTTGGTTCGCCACCaga                                                                                                                             >  2:863025‑M1/125‑149 (MQ=255)

                          aaGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGc                                                                                                                           >  2:590507/1‑149 (MQ=255)

                           agaaatacgaaccggcgaaagcatggtccgcatccactgtgtacgtgaaaggtgatcgcgttgttgttgatgggcaggcttatgaagcgctgttctggacgcaaagtgacaaccctgctccGGTGGCGTTTTGGTTCGCCACCAGAGCa                                                                                                                          >  2:649612‑M1/122‑149 (MQ=255)

                            gCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAg                                                                                                                         >  4:855642/1‑149 (MQ=255)

                             cGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAgg                                                                                                                        >  4:1043943/1‑149 (MQ=255)

                              gAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAggg                                                                                                                       <  4:549895/149‑1 (MQ=255)

                               aaTCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGt                                                                                                                      <  2:318594/149‑1 (MQ=255)

                                aTCAGCGTATTGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGtt                                                                                                                     >  2:537491/1‑149 (MQ=255)

                                aTCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGtt                                                                                                                     <  2:19031/149‑1 (MQ=255)

                                aTCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGtt                                                                                                                     <  4:23837/149‑1 (MQ=255)

                                        aTCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACttt                                                                                                             <  1:853441/149‑1 (MQ=255)

                                              ggCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTcc                                                                                                       <  4:223658/149‑1 (MQ=255)

                                              ggCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTcc                                                                                                       <  1:923624/149‑1 (MQ=255)

                                                cATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAg                                                                                                     >  2:245716/1‑149 (MQ=255)

                                                cATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAg                                                                                                     >  4:899318/1‑149 (MQ=255)

                                                   ggtccgcatccactgtgtacgtgaaaggtgatcgcgttgttgttgatgggcaggcttatgaagcgctgttctggacgcaaagtgacaaccctgctctGGTGGCGTTTTGGTTCGCCACCaga                                                                                                                             <  2:47071‑M1/25‑1 (MQ=255)

                                                     tccgcatccactgtgtacgtgaaaggtgatcgcgttgttgttgatgggcaggcttatgaagcgctgttctggacgcaaagtgacaaccctgctctGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTg                                                                                                                    <  3:718662‑M1/34‑1 (MQ=255)

                                                     aGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAg                                                                                                >  4:846835/1‑149 (MQ=255)

                                                      gCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCCATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAgc                                                                                               >  1:514635/1‑149 (MQ=255)

                                                         tttCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCt                                                                                            <  1:662139/149‑1 (MQ=255)

                                                            cTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCa                                                                                         >  4:264776/1‑149 (MQ=255)

                                                               gATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATaa                                                                                      >  4:412274/1‑149 (MQ=255)

                                                                aTTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAgg                                                                                                                        <  1:565632/114‑1 (MQ=255)

                                                                    aaCTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTg                                                                                 <  1:36128/149‑1 (MQ=255)

                                                                      cTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGcc                                                                               >  1:945914/1‑149 (MQ=255)

                                                                       tGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGccc                                                                              <  1:700367/149‑1 (MQ=255)

                                                                                 tattCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATcaacaaca                                                                    <  3:855642/149‑1 (MQ=255)

                                                                                   ttCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCaacaacaac                                                                  <  4:718602/149‑1 (MQ=255)

                                                                                   ttCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCaacaacaac                                                                  <  2:148642/149‑1 (MQ=255)

                                                                                   ttCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCaacaacaac                                                                  <  4:357699/149‑1 (MQ=255)

                                                                                     cAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAAcgc                                                                >  1:909226/1‑149 (MQ=255)

                                                                                      aGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAAcgcg                                                               >  1:163707/1‑149 (MQ=255)

                                                                                       gCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAAcgcta                                                              <  1:590507/149‑3 (MQ=255)

                                                                                        ctctTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGAt                                                             >  1:380556/1‑149 (MQ=255)

                                                                                         tctTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATc                                                            >  3:125235/1‑149 (MQ=255)

                                                                                           ttCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCAc                                                          <  1:664368/149‑1 (MQ=255)

                                                                                              gTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTTCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTTCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCtt                                                       <  2:959580/149‑1 (MQ=255)

                                                                                              gTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCtt                                                       >  4:941284/1‑149 (MQ=255)

                                                                                               ttGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCttt                                                      >  4:954567/1‑149 (MQ=255)

                                                                                               ttGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGATCGCCACCAGAGCAGGGTTGTCACTTTGTGTCCCGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCCCCttt                                                      >  1:1019422/1‑149 (MQ=255)

                                                                                                  cTATAGCTCTGAGCCTTATCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGAGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAAGAACAACGCGATCACCTTTCAc                                                   <  2:338356/149‑1 (MQ=255)

                                                                                                    ataGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGt                                                 >  4:378181/1‑149 (MQ=255)

                                                                                                      aGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTac                                               >  1:708063/1‑149 (MQ=255)

                                                                                                           tGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGt                                          <  1:1018604/149‑1 (MQ=255)

                                                                                                           tGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGt                                          <  3:412274/149‑1 (MQ=255)

                                                                                                           tGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGt                                          <  4:480602/149‑1 (MQ=255)

                                                                                                            gAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTg                                         <  3:293746/149‑1 (MQ=255)

                                                                                                             aGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTgg                                        >  2:357040/1‑149 (MQ=255)

                                                                                                              gCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGa                                       >  2:564322/1‑149 (MQ=255)

                                                                                                               ccTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGAt                                      <  4:125235/149‑1 (MQ=255)

                                                                                                               ccTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGAt                                      <  2:1018673/149‑1 (MQ=255)

                                                                                                                 ttACCTAACGGCTCCCACGGGCGGTTATTGCTAGCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTGGAGTCCAGCACAGCGCTTCACAAGCCTGACCGGCAACAACAACGCGATCGCCTTTCACGTACACAGTGGATGc                                    <  4:134354/149‑1 (MQ=255)

                                                                                                                      tAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTg                                         <  2:856979/139‑1 (MQ=255)

                                                                                                                      tAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTg                                         >  1:856979/1‑139 (MQ=255)

                                                                                                                      tAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGAcc                               >  2:620962/1‑149 (MQ=255)

                                                                                                                      tAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGAcc                               >  2:1051948/1‑149 (MQ=255)

                                                                                                                        aCGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCAt                             >  1:214402/1‑149 (MQ=255)

                                                                                                                         cGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATg                            >  4:792874/1‑149 (MQ=255)

                                                                                                                           gCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATc                                                                           >  3:900814/1‑100 (MQ=255)

                                                                                                                           gCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATc                                                                           <  4:900814/100‑1 (MQ=255)

                                                                                                                             ttCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATaa                                                                                      >  3:395102/1‑87 (MQ=255)

                                                                                                                             ttCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATaa                                                                                      <  4:395102/87‑1 (MQ=255)

                                                                                                                             ttCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCttt                        >  4:254247/1‑149 (MQ=255)

                                                                                                                             ttCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCttt                        >  2:346664/1‑149 (MQ=255)

                                                                                                                                cACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGc                     <  2:965710/149‑1 (MQ=255)

                                                                                                                                  aagtgacaaccctgctctGGTGGCGAACCAAAACGCCACCAGAGCACGGTTGTCACTTTGCGTCCAGAACAGCTCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCg                   <  4:625041‑M1/131‑1 (MQ=255)

                                                                                                                                   gggCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCgg                  <  3:920769/149‑1 (MQ=255)

                                                                                                                                    ggcggcTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGt                 <  2:387511/149‑1 (MQ=255)

                                                                                                                                     gcggcTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGCTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGtt                <  1:315090/149‑1 (MQ=255)

                                                                                                                                         cTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGTTCGTa            <  1:727848/149‑1 (MQ=255)

                                                                                                                                          tATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGTTCGTAt           >  1:134513/1‑149 (MQ=255)

                                                                                                                                                tACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGTTCGTa            <  3:343353/142‑1 (MQ=255)

                                                                                                                                                tACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGTTCGTATttcttc     >  3:293991/1‑149 (MQ=255)

                                                                                                                                                   cGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACATAGTGGATGCGGACCATGCTTTCGCCGGTTCGTATTTCTTCCAc  <  4:323046/149‑1 (MQ=255)

                                                                                                                                                   cGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGTTCGTATTTCTTCCAc  <  3:196845/149‑1 (MQ=255)

TCTGAGAAATGTAGTTCACACCGTTAAAGCGAATCAGCGTATCGCTGGCATAAAGCGTTTCTGGATTAAACTGCGGCGCATTATTCAGCTCTTCGTTGCTATAGCTCTGAGCCTTACCTAACGGCTTCCACGGGCGGCTATTGCTACCGGTGGCGTTTTGGTTCGCCACCAGAGCAGGGTTGTCACTTTGCGTCCAGAACAGCGCTTCATAAGCCTGCCCATCAACAACAACGCGATCACCTTTCACGTACACAGTGGATGCGGACCATGCTTTCGCCGGTTCGTATTTCTTCCAC  >  NC_000913/3468203‑3468498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.