New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	23 (0.300)	39 (0.560)	31/400	NT	63.8%	coding (290/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	1209619 =	23 (0.330)					pseudogene (1/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

TGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGTAGTA  >  NC_000913/1209347‑1209892                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                  tGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGCCCCCGGAACCGGGACACCAACAGGTAATGCAAGCCCTTCCCCCAAACCAACGt                                                                                                                                                                                                                                                                                 >  4:39156/1‑275 (MQ=255)         aTCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCCATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCCCCATTTCATTTCATCCAGCCTGTTGGCGGAGTGCATGAAGCCAACGGAACCGGGACCCCAACAGTTAATGCAGAGCCTTCCCCAAAACCACCGTTTATGaaa                                                                                                                                                                                                                                                                         >  4:55301/1‑275 (MQ=255)          tCCATGAGCATGATCCTCTGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                                                                                                                                                                                                                        >  2:362396/1‑275 (MQ=255)                ccccgttgccactgcattgataggtgcgctgacattgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgttcaataccaccaatcataaccgttatagctataaaaccggtgcgtcctaacgtatccgtttctgcatttggtttttctccttctcccaaaccaaCGTTTTTGAAAatgaaaa                                                                                                                                                                                                                                                                  >  4:180342‑M2/258‑273 (MQ=255)                ccccgttgccactgcattgataggtgcgctgacattgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaaga                                                                                                                                                                                                                                                                  >  2:253824‑M2/258‑275 (MQ=255)                            cGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGAATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAAAGCCTTCCCCCAAACCACAGTTTATGAAAAGGAAGAAATAACAAGCaa                                                                                                                                                                                                                                                      >  4:285062/1‑275 (MQ=255)                                        tcggctgacattgtcattatttgcaacaacggacacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccctccagagtcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                                                                                          <  2:33415‑M2/42‑1 (MQ=255)                                        cTGAATACTTAAAGTAGAGGGACCTGGATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAGAAGGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                                                                                          <  4:46285/275‑1 (MQ=255)                                         gcgctgacattgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                                                                                                                                                                                                         >  2:155444‑M2/233‑275 (MQ=255)                                           aaTACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTACTGCAGAGCCTTCTCCCAAACAAACGTTTATGAAAATGAAGAAATAACAAGCAATTGGCATCATTCCTg                                                                                                                                                                                                                                       >  2:524718/1‑275 (MQ=255)                                                ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtttt                                                                                                                                                                                                                                  >  2:147216/1‑275 (MQ=255)                                                      cataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtagttccatcccccccagaggcagatgctgttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                                                                                                                                                                                                                             <  2:180343‑M2/55‑1 (MQ=255)                                                          gcgcCCCGTATCAACCCCCCGCCCGTCAACCCAACCACGACTAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGAGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggggg                                                                                                                                                                                                                         <  2:55301/274‑1 (MQ=255)                                                          gCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                                                                                                                                                                                                    >  2:440127/1‑247 (MQ=255)                                                          gCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCCTCATTCCTGCTTTTACCAGGGGGa                                                                                                                                                                                                                        >  2:346169/1‑275 (MQ=255)                                                              ccTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGca                                                                                                                                                                                                                                                <  4:440126/247‑1 (MQ=255)                                                                 gTATCAACCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGAATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                                                                                 <  2:285063/275‑1 (MQ=255)                                                                 acaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                                                                                                                                                                                 <  4:155443‑M2/67‑1 (MQ=255)                                                                       gcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                                                                           <  4:253823‑M2/73‑1 (MQ=255)                                                                            ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAGCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaagaa                                                                                                                                                                                                                                                                 >  2:260673/1‑216 (MQ=255)                                                                                ccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAGCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATaa                                                                                                                                                                                                                                                             <  4:260672/216‑1 (MQ=255)                                                                                          acgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc                                                                                                                                                                                        >  2:97656‑M2/184‑275 (MQ=255)                                                                                           cgcaaccgggaatacaactgtatttccatcccccccataggcagatgcttttgcggcattccacccccactgaatgcttactgattgctcactaccaccaatcataaccggtatagatatgaaaccggctcgtcctaatgtagccgtcgctgcattgcgttttcctccttctcccaaacgacCGTGTATGAAATTGAAGAACTAACAAGCAAATGGCATCATTCCTGCTTTTACAAGGGGGATTTAACATGCTACTGGGCAATGTAcgcgttgaa                                                                                                                                                                                       >  4:436805‑M2/183‑271 (MQ=255)                                                                                              aaccgggaatacaactgtatttccatcccccccagaggcagatgcctttgcggcattccacccccactgaatgattactgcttgctcaataccaccaatcataaccggtatagctatgaaaccggtacgtcctaatgtagccgttgctgcattgagatttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATACCAAGCAAATGGCATCATTACTGCTTTTACCAGGGTGATTTAACATGCTTATTGGATATGTACGCTTATcaaca                                                                                                                                                                                    >  2:380744‑M2/180‑275 (MQ=255)                                                                                                ccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaaggtagccgttgctgcattgagttttgctcctgctcccaaaccaaCGGTTATGAAAAAGAAGAAATAACAAGCAAATGGCAGCATTCCAGCTTTTACCAGGGGGTTTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa                                                                                                                                                                                  >  2:196681‑M2/178‑275 (MQ=255)                                                                                                 aaTAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGTGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATCCTTATTGGCTATGTACTCGCATACACAAATGAcc                                                                                                                                                                             >  1:95761/1‑279 (MQ=255)                                                                                                    gaatacacatttatttccagcccccccaggggcagatgcttgtgcggcattccacccccactgaatgattactgattgcgcaataccatcaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttcacccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                                                                                                                                                              <  2:436806‑M2/102‑1 (MQ=255)                                                                                                          accacGTAAAACCGGGAATTGATTTGTCGGGTAAGACTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                                                                                                                                                         <  4:524717/274‑1 (MQ=255)                                                                                                           actttcattccattccccccagaggccgatgctttttcggcattccacccccactgaagtattcctgattgctcaataccacctatcataaccggtatagctatgaaaccgctccgtcctaatgtcgccgttgctgcattgagttttgctccttctcccaaactaaCGTTTATTAAAATGGAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACTCGTATCAACCCATGACCAGaacc                                                                                                                                                                       <  4:196680‑M2/109‑2 (MQ=255)                                                                                                            cacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAacac                                                                                                                                                                      <  2:157876/275‑1 (MQ=255)                                                                                                                tAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAt                                                                                                                                                                  <  4:147215/275‑1 (MQ=255)                                                                                                                       tctccccccgaggcagatgcttttgcggcattccacccccactgcatgattactgattgctcaatacccccaatcataaccggtatagctatgaaaccggttcgtcctaatgtagccgtttctgcattgagttttgctccttctcccaatcctaCGTTTATGAAACTGAAGAATTAACAACCAAATGGCATCATTCCTGCTTTTACCAGGGGGCTTTAACATCCTTATTGCTTATGTACTCCTATAAACAAATGACCAAACCACAAATcaacaa                                                                                                                                                            >  4:197783‑M2/155‑274 (MQ=255)                                                                                                                           ccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                                                                                                                                                                    <  2:197784‑M2/112‑1 (MQ=255)                                                                                                                                    tCGGATAAGGCTTTGACCGTTTCGGGGATTCTTCAGCAGAAAAAGCGGCACCCTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa                                                                                                                                              <  4:346168/275‑1 (MQ=255)                                                                                                                                                 tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                                                                                                                                                                                                 >  2:713967/1‑179 (MQ=255)                                                                                                                                                     aGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                                                                                                                                                                                                                             <  4:713966/179‑1 (MQ=255)                                                                                                                                                               actgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggggcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTg                                                                                                                    <  4:97656‑M2/160‑1 (MQ=255)                                                                                                                                                                 tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACTAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGACGGATGCGAGATGAGTTTTGAAGACaa                                                                                                             >  1:10732/1‑279 (MQ=255)                                                                                                                                                                        ttactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaac                                                                                                                                                                                     >  2:626889‑M2/106‑200 (MQ=255)                                                                                                                                                                            tgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                                                                                                                                                 <  4:626888‑M2/99‑1 (MQ=255)                                                                                                                                                                             gattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                                                                                                                                                                                               >  2:184437‑M2/101‑169 (MQ=255)                                                                                                                                                                                 gctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                                                                           <  4:184436‑M2/73‑1 (MQ=255)                                                                                                                                                                                            ccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGaaa                                                                                      >  4:271662‑M2/86‑275 (MQ=255)                                                                                                                                                                                            agattcattaccgttttaactctgaacccgttncgtccttttttagccgttgttcactngagttttgctccttctcccaaatcaaCGTTTATGAAAATGAAGAAAAAACAAGCAAATGGCATGCTTCCTGCTTTTACCANGGGGATTTAACATGCTTATTGGCTATGTACGGGTATAAAAAAATGACCAGAACACAGATCTACAACATAATGCCCTGAACTGGGCAGGATGCGAGCGGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGc                                                                                   <  3:113493‑M2/193‑1 (MQ=255)                                                                                                                                                                                                 cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCg                                                                                 >  2:267466/1‑275 (MQ=255)                                                                                                                                                                                                          tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAATTGGCATCATTCCTGCTTTTACCAGGGGGATTTACCATGCTCATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGc                                                                                   >  1:113493‑M2/72‑264 (MQ=255)                                                                                                                                                                                                          tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTa                                                                                                                                                                                                                                 >  4:234380‑M2/72‑122 (MQ=255)                                                                                                                                                                                                              gctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                                                                                                                                                                                                                             <  2:234381‑M2/55‑1 (MQ=255)                                                                                                                                                                                                                 atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAcc                                                                                                                                                                             >  4:597486‑M2/65‑167 (MQ=255)                                                                                                                                                                                                                   aGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGACTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCt                                                                <  2:445215/274‑1 (MQ=255)                                                                                                                                                                                                                     aaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                                                                                                                                                         <  2:597487‑M2/107‑1 (MQ=255)                                                                                                                                                                                                                                 ctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                                                                           >  4:727200‑M2/49‑121 (MQ=255)                                                                                                                                                                                                                                   aatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTAAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACaaa                                                                                              <  2:174100‑M2/182‑1 (MQ=255)                                                                                                                                                                                                                                     tgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                                                                                                                                                       <  2:727201‑M2/77‑1 (MQ=255)                                                                                                                                                                                                                                       gagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAGCATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGTACTGTGCAGGATGCGAGCTGATTTTTGAAGAAATGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGa                                           <  2:189723‑M2/233‑1 (MQ=255)                                                                                                                                                                                                                                         gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCTGGATGCGAGCTGATTTTTGAAGACAAGATACGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACCTTATCGCCAGGCGaca                                         >  2:222417‑M2/41‑275 (MQ=255)                                                                                                                                                                                                                                          ccgttgttgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGaa                                                                                                                  >  1:87395‑M2/40‑201 (MQ=255)                                                                                                                                                                                                                                          ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAg                                                                                                                                                                           >  2:687868‑M2/40‑144 (MQ=255)                                                                                                                                                                                                                                          ccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCCGGTGacac                                        >  2:436405‑M2/40‑275 (MQ=255)                                                                                                                                                                                                                                            gttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGATGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGCGATTTAACATGCTTATTGGCTATGTCCGCGTATCAACAGATGACCAGAACACAGATCTCCAACGTAATGCGCTAAACTGTGCAGGATg                                                                                                                                  >  4:179026‑M2/38‑183 (MQ=255)                                                                                                                                                                                                                                            gttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACAct                                       <  2:271663‑M2/237‑1 (MQ=255)                                                                                                                                                                                                                                              tgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                                                                                       <  4:687867‑M2/109‑1 (MQ=255)                                                                                                                                                                                                                                                cttcatagagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGAAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAg                                                                                                                              <  2:179027‑M2/150‑1 (MQ=255)                                                                                                                                                                                                                                                             tgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGCACTGTGCAGGATGCGAGCTGATTTTTGAAGCCAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGCCTGAAAAAACTGCTCAGGACATTATAGGCCGGTGACACCCTGATTGTCGGGAAGCTg                     >  4:574238‑M2/21‑275 (MQ=255)                                                                                                                                                                                                                                                                gCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGAt                  >  2:553414/1‑275 (MQ=255)                                                                                                                                                                                                                                                                  cttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                                                                                                                                                                                                    >  4:306005‑M2/16‑95 (MQ=255)                                                                                                                                                                                                                                                                    tctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAc                                                                                                                                                                                               >  4:594727‑M2/14‑98 (MQ=255)                                                                                                                                                                                                                                                                      tcccaaaccaaCGTTTTTGAAAAGGAAGAAATAACAAACAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAGGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACGGGTCGACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGAGTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCt             <  4:267465‑M2/263‑1 (MQ=255)                                                                                                                                                                                                                                                                      tcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                                                                                                                                                                                                <  2:306006‑M2/84‑1 (MQ=255)                                                                                                                                                                                                                                                                        ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGt                                                                                                                                                                                           <  2:594728‑M2/89‑1 (MQ=255)                                                                                                                                                                                                                                                                                aCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCgg                                                  >  4:287401‑M2/2‑227 (MQ=255)                                                                                                                                                                                                                                                                                aCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCggagta  >  2:280139‑M2/2‑275 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                  TGACGGTAATCCATGAGCATGATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGTAGTA  >  NC_000913/1209347‑1209892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.