| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,131,769 | T→C | 7.2% | H101R (CAT→CGT) | wcaC ← | putative glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,131,769 | 0 | T | C | 7.2% | 211.8 / 2.7 | 65 | H101R (CAT→CGT) | wcaC | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base T (34/26); new base C (2/3); total (36/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01 | |||||||||||
ACAGCCCAGCGCCAGCATCTCACGGAATAACTGGCGTTTGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAGCGCACGCTGGTGGAGATCTAACGCCACACC > NC_000913/2131495‑2132022 | aCAGCCCAGCGCCAGCATCTCACGGAATAACTGGCGTTTGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACAt > 2:377469/1‑275 (MQ=255) cccAGCGCCAGCATCTCACGGAATAACTGGCGTTTGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGaaa > 2:524802/1‑275 (MQ=255) cgcCAGCATCTCACGGAATAACTGGCGTTTGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGGCGGTACAGGCGCAGCGTCCGTTACCACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGATGTCCGGTTTAGGGTTTTTCACTTTTTCGCAAAATCGCACCACTCTCTTAAGATTTCGCCAATAGCTTTCCAGCACATGAAAATGCAgaa > 1:21195/1‑276 (MQ=255) accTGGCGTTTGCCCGCCATCAGTTGGGGTGCGCGATCAATCTTTA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCtgt < 4:377468/273‑1 (MQ=255) cgcctcccaGTTGGGGTGCGCGATCAA‑CTTGACCCGGCGGATATTTTTTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTg < 4:524801/269‑1 (MQ=255) tgCGCGATCAATCTTCA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACACGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATCTACCTCATTGAAAtt > 1:217582/1‑279 (MQ=255) cgcgATCAATCTTCA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGATGTTCAGGTAATGGGCCGACAAAACCCATTGaaa > 4:165732/1‑275 (MQ=255) cTTCA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAAc < 2:165733/274‑1 (MQ=255) cA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACCCATTGAACTTGCCAAACAGa > 2:394049/1‑274 (MQ=255) cggATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTaaa > 1:53234/1‑279 (MQ=255) cggATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCAAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTGTTCGCACAAGCGCACCACGCCCTTAAGATTTACCCATTACCTGTGCAGCTCATGAAAATGCACGACCACCGGACCAGCGTTGCGAGTACTGATGCGATAACCGTAATTAAAATTGCAAAACacaccccgtc > 4:4328/1‑266 (MQ=255) aTTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAAt > 2:87150/1‑225 (MQ=255) aTTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACCCATTGAAATTGCCAAACAGATCGCGATTaaacaaac > 4:314913/1‑275 (MQ=255) tggggTGGGGAATTTTTGGCCGCGTGTTTTCNANCCGGGGCAACCGGCGGGAAAGGCTCAGGCACCGGTAACACTCCAGNGGTCGTGCGGCGACCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCANGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACa < 3:53234/275‑1 (MQ=255) aaGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTg < 4:87150/225‑1 (MQ=255) ggCATTTCTGGCAGCCTGTTTTCCAGCCCTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGCCGAAAAAGAGCa > 2:85282/1‑275 (MQ=255) tCCAGCCTTCGCAACCGTCGGTAAAGGCGCGGCTTCCGGGAACACTCCCGGGGTCGTGCAGCGTCCAGACCAGTGTGACGTCCGGTTTATGGTTTTTGACTGTTTCGCAAAAGCGCACCACCCTAGTAAGATTTAGCCAGTAGCTGTGCAGCACACGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATc < 4:19108/275‑1 (MQ=255) aGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCa < 1:97027/251‑1 (MQ=255) cGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCa > 4:347474/1‑264 (MQ=255) gCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGa > 2:94979/1‑178 (MQ=255) aCCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCcg < 2:347475/264‑1 (MQ=255) ccGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTaa < 4:94979/178‑1 (MQ=255) aGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATCTTCGCCATCCCGTTCATCCGCGGCGTGTGTTTTTTGACCTGc > 2:343443/1‑275 (MQ=255) aGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGa > 2:466438/1‑146 (MQ=255) tCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCg < 4:466437/146‑1 (MQ=255) cAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGAAAGTTCTGATGGCGGACGcc > 4:60585/1‑274 (MQ=255) gTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGAcc > 4:190133/1‑129 (MQ=255) tCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCt < 2:190134/129‑1 (MQ=255) gTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAAt > 4:39058/1‑138 (MQ=255) gTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACg < 1:168162/189‑1 (MQ=255) gTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCGCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACACATTGAAATTGCCAAACAGATCGCGATTAAACAGACg > 3:168162/1‑189 (MQ=255) ggctgccagaccaggGTGCCGGCCTGTTTTTGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATCTAGCCAGTAGCTGAGCAGGACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTgccgcc < 4:404623/270‑1 (MQ=255) aGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTg < 2:39058/138‑1 (MQ=255) tCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGAAGAAACAAAGCAAACTTCCCCTTCGCGGTACTCCGCTGCTCATGTTTTCGTACCGTCGTGTAGTTCTGATGGCTGACCCCCCCTTTGCCCCCgttc > 4:589491/1‑274 (MQ=255) tCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTCTGCAGCACACGAAAATGCAGGACCACCGGa > 4:213214/1‑113 (MQ=255) agaccagaGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCg > 2:260980/1‑275 (MQ=255) gaccagaTTGATGTACGGTTTGTGGTTTTTCACTTTTGCGCAAAAGCGGACCACGCGCTTGAGGTTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCTGACACGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCg < 4:394048/274‑1 (MQ=255) gaccagaGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTCTGCAGCACACGAAAATGCAGGACCACCGGACCCg < 2:213215/113‑1 (MQ=255) agTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCAGACGCCCCTTTTGCAGCCTTTGCCGTAACCGt > 2:662685/1‑275 (MQ=255) agTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGAGTAAACAGACGAAACAGAGCAATATTCGCCAACGCGGTCACCCGCGGAGTTTGTTTGGTGCCCTGGGGGACGTTTTAATGGCTTCAGCCCTCTCTCCCCCATTTGCCGCAAcgct > 4:273709/1‑272 (MQ=255) agTGAAGGCCGGGTTATGGTTTTTAACTTTTGCGCATAAGAGAACCAGGCGCTTAAGATTTAGCCAGTAGCTGTGCAGCATATGAAAAGGCAGTACCACCGGACTATGTGTGGGAGGAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCg < 4:343442/274‑1 (MQ=255) cGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACTACCGGACCCGCCTTGCGAGTAATGGTTCGATATAACTCATTGACATTGCCAAACAGATCGCGAATAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCCCGGTGTATGTTTGATCACCTGCGGCAAGTTCTGATGGCTGACTATCCCTTTGCCCCCTTTTCCGTACCCGtcaac > 4:557185/1‑270 (MQ=255) cGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCCCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGACAGTTCTGATGGCTGGCGCTCTCTTTGCCGCCTTTGCCGGAACCGTAAAc > 4:189221/1‑274 (MQ=255) tCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACaa > 2:352675/1‑274 (MQ=255) ggTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAAtg < 2:189222/275‑1 (MQ=255) ggTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGAATGTTTGATGACCTGCGGCTAGTTCTGATGGATGACGCTATCTTTGCCGCCTTTGCCGTAACCGTAGAAAAAAtt > 2:148123/1‑274 (MQ=255) gTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAAtgt < 4:352674/275‑1 (MQ=255) tGGTTTTTCACTTTTTCGCCACAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACACGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCGAACAGATCGCGATTAAACAGACGAATCAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACg < 2:273710/274‑1 (MQ=255) ggTTTTTCACTGTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGcc < 2:626174/275‑1 (MQ=255) ttCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCg > 2:546487/1‑85 (MQ=255) ttCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTaaa > 4:161816/1‑143 (MQ=255) ttCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCa > 2:710253/1‑178 (MQ=255) cTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCtgt < 4:546486/85‑1 (MQ=255) cTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGa < 2:161817/143‑1 (MQ=255) cTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCcg < 4:710252/178‑1 (MQ=255) tgtaccAAAAGCGAACCAGCGTCTAAAGGTTTGNNNAGTAGCTGTGCAGAACACGAAAATGAAGGACACCCGGACCCGCGGGGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTACGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAgcg < 3:217582/274‑1 (MQ=255) accacGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAGCGCACGCtggtg < 2:60585/275‑1 (MQ=255) tctTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAACGCCCCCTGGTGGAAATc > 4:137337/1‑274 (MQ=255) tttAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGGACACCGGAGCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAGCCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAGCGCACGCTGGTGGAGATCTAACGCcac < 2:4328/275‑1 (MQ=255) gCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTtgatg > 4:456765/1‑158 (MQ=255) gCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAGCGCCCGCTGGTGGAGATCTAACGCCACAcc > 2:297515/1‑274 (MQ=255) gCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCCTTGCCGTAACCGTCGACAAAATGTGACGCCAGCCCCTGTTGCAGCGCACGCTGGTGGAGATCTAACGCCACAcc > 2:378745/1‑274 (MQ=255) gTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCt < 2:456766/158‑1 (MQ=255) gtgCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGc > 2:206498/1‑219 (MQ=255) cagcaCATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAGCGCACg > 1:198905/1‑237 (MQ=255) agcaCATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGc < 4:206497/219‑1 (MQ=255) tGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAGCGCACGc < 2:132927/231‑1 (MQ=255) | ACAGCCCAGCGCCAGCATCTCACGGAATAACTGGCGTTTGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCA‑CCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGTAATGGTGCGATATAACTCATTGAAATTGCCAAACAGATCGCGATTAAACAGACGAAACAGAGCAATATTCGCCATCGCGGTCATCCGCGGCGTATGTTTGATGACCTGCGGATAGTTCTGATGGCTGACGCTCTCTTTGCCGCCTTTGCCGTAACCGTAGACAAAATGTGACGCCAGCCCCTGTTGCAGCGCACGCTGGTGGAGATCTAACGCCACACC > NC_000913/2131495‑2132022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |