| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1327735 = | NA (NA) | 3 (0.020) | 3/246 | NT | NA | intergenic (+8/+32) | rluB/btuR | 23S rRNA pseudouridine(2605) synthase/cob(I)yrinic acid a,c‑diamide adenosyltransferase |
| ? | NC_000913 | 1327758 = | NA (NA) | intergenic (+31/+9) | rluB/btuR | 23S rRNA pseudouridine(2605) synthase/cob(I)yrinic acid a,c‑diamide adenosyltransferase | |||||
TTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1327888‑1327735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcatTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGT > NC_000913/1327758‑1327905 TTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCC < 4:1049002/149‑1TTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCC > 2:1068760/1‑149 CACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCA > 3:1355877/1‑149 CACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCA < 2:9002/149‑1 GGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGCTGCCGGTGTAAAAGCGCAGCTAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTACAGATTAATAATCGA < 2:190503/149‑1 ATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTACA < 4:213817/86‑1 ATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGACGTCATATCCGGCATTTTTACA > 3:213817/1‑86 TGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAAT > 1:599687/1‑145 TGACGTCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAAT < 2:599687/145‑1 TCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTG > 1:251709/1‑149 TCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTG > 3:1164727/1‑149 CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGA > 2:237710/1‑115 CGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGA < 1:237710/115‑1 GGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTG > 3:1320508/1‑149 GGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACAACGACCCGTGATAATCACCGTCTGTTG > 1:62546/1‑149 GCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGA < 1:710997/149‑1 CATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGAT < 2:582753/149‑1 CATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGAT < 3:680534/149‑1 CATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGAT < 1:40228/149‑1 TTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGT < 1:596949/149‑1 TTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAATCTGTAAAAATGCCGGATATGACGTCCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1327888‑1327735‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcatTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGT > NC_000913/1327758‑1327905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |