New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2593025 =NA (NA)8 (0.050) 8/248 NT 6.8% noncoding (48/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2593057 = 109 (0.690)noncoding (80/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 151 total aligned reads displayed.

AGCCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACGCAAGTGATCCAGGG  >  NC_000913/2592877‑2593169
                                                                                                                                                    |                                                                                                                                                
aggccatgcgatcgacaatcgcagtatgcaatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgg                                                                                                                                                  <  1:1456429‑M1/1‑1 (MQ=255)
  gccatgcgatcgacaatcgcagtatgcaatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGcc                                                                                                                                                <  3:1359115‑M1/3‑1 (MQ=255)
  atactgcgattgtcgatcgcagtatgcaatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGcc                                                                                                                                                <  4:1121861‑M1/3‑1 (MQ=255)
   ccatgcgatcgacaatctcagtatggaatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCt                                                                                                                                               <  2:295446‑M1/4‑1 (MQ=255)
   ccatgcgatcgacaatcgcagtatgcaatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCt                                                                                                                                               <  3:24348‑M1/4‑1 (MQ=255)
     gAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGa                                                                                                                                             >  1:359447/1‑149 (MQ=255)
     atgcgatcgacaatcgcagtatgcaatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCTGa                                                                                                                                             <  1:240026‑M1/6‑1 (MQ=255)
      aGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAt                                                                                                                                            <  2:1477175/149‑1 (MQ=255)
       gCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATg                                                                                                                                           <  2:576480/149‑1 (MQ=255)
       gCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATg                                                                                                                                           <  2:797164/149‑1 (MQ=255)
           cccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                                                                                                                                       >  2:901104/1‑149 (MQ=255)
                 atcgcagtatgcaatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCTGAt                                                                                                                                            >  4:1152703‑M1/132‑138 (MQ=255)
                 atcgcagtatgcaatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCTGAt                                                                                                                                            <  3:1152703‑M1/7‑1 (MQ=255)
                  aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcg                                                                                                                                >  4:1407564/1‑149 (MQ=255)
                      tGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc                                                                                                                            >  1:1023799/1‑149 (MQ=255)
                      tGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTGAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc                                                                                                                            >  2:1206371/1‑149 (MQ=255)
                         tttCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa                                                                                                                         >  4:620942/1‑149 (MQ=255)
                           tCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc                                                                                                                       >  4:654905/1‑149 (MQ=255)
                           tCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc                                                                                                                       >  2:1353055/1‑149 (MQ=255)
                            cAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCa                                                                                                                      <  2:487867/149‑1 (MQ=255)
                            cAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCa                                                                                                                      <  4:890494/149‑1 (MQ=255)
                             aatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCTGATGCGACGCTCACGCGTCTTATCAg                                                                                                                     <  4:50610‑M1/30‑1 (MQ=255)
                             aatttgccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCTGATAAGACGCTCACGCGTCTTATCAg                                                                                                                     >  1:411678‑M1/120‑149 (MQ=255)
                             aaCGATAAGTGGGACGATGATGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa                                                                                                                         <  4:642440/145‑1 (MQ=255)
                             aaCGATAAGTGGGACGATGATGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa                                                                                                                         >  3:642440/1‑145 (MQ=255)
                             aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg                                                                                                                     >  4:457816/1‑149 (MQ=255)
                             aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg                                                                                                                     >  4:238254/1‑149 (MQ=255)
                             aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg                                                                                                                     >  2:1336693/1‑149 (MQ=255)
                             aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg                                                                                                                     >  1:1185477/1‑149 (MQ=255)
                             aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg                                                                                                                     >  3:435251/1‑149 (MQ=255)
                             aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAg                                                                                                                     >  2:753432/1‑149 (MQ=255)
                               cGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGc                                                                                                                   <  4:1236222/149‑1 (MQ=255)
                                gATAAGTGGGACGATGACGAGGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc                                                                                                                  <  3:1219605/149‑1 (MQ=255)
                                gATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc                                                                                                                  <  3:1346079/149‑1 (MQ=255)
                                  gccctggatcacttgcgttataccattccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAg                                                                                                                >  3:50610‑M1/115‑149 (MQ=255)
                                        ggACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATc                                                                                                          <  4:620685/149‑1 (MQ=255)
                                         gACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCt                                                                                                         <  1:380290/149‑1 (MQ=255)
                                            gATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTc                                                                                                      >  1:1393002/1‑149 (MQ=255)
                                            gATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCACATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTc                                                                                                      <  3:1415765/149‑1 (MQ=255)
                                              tGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAATCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCtt                                                                                                    >  2:1060704/1‑149 (MQ=255)
                                               gacgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCttt                                                                                                   >  3:1203473/1‑149 (MQ=255)
                                               gacgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCttt                                                                                                   >  3:431214/1‑149 (MQ=255)
                                               gacgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCttt                                                                                                   <  3:849462/149‑1 (MQ=255)
                                                     gacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatc                                                                                             >  3:637317/1‑149 (MQ=255)
                                                        tGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                                                                          <  3:654905/149‑1 (MQ=255)
                                                          gCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTc                                                                                        >  4:1421730/1‑149 (MQ=255)
                                                            tccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCTGATGCGACGCTCACGCGTCTTATCAGGcc                                                                                                                  <  3:1440541‑M1/33‑1 (MQ=255)
                                                            tccgaaacattatttcgacgaagcgctaagtggcggtaagcctggcgatgatgatgtgattgaaatgatgtaaaagacagattacctgGCCTGATGCGACGCTCACGCGTCTTATCAGGcc                                                                                                                  >  4:1440541‑M1/89‑121 (MQ=255)
                                                             gAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAAt                                                                                     <  1:808248/149‑1 (MQ=255)
                                                             gAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAAt                                                                                     >  4:24348/1‑149 (MQ=255)
                                                             gAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAAt                                                                                     >  2:1456429/1‑149 (MQ=255)
                                                              aaaaaGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGACCAGGTAATCTGTCTTTTACATCATTTCAATc                                                                                    <  1:996712/149‑1 (MQ=255)
                                                              aaaaaGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCGTATCAGGCCAGGTAATCTGTCGTTTACATCATTTCAATc                                                                                    >  2:260736/1‑149 (MQ=255)
                                                               aaaaGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATca                                                                                   <  1:441080/149‑1 (MQ=255)
                                                                 aaGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcaca                                                                                 <  4:257823/149‑1 (MQ=255)
                                                                  aGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGTTAAGGCGTTAACGCCGCATCCGGCAATGGTGAATGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTATATCATTTCAATCAcat                                                                                >  2:1046634/1‑149 (MQ=255)
                                                                   ggATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatc                                                                               <  4:435251/149‑1 (MQ=255)
                                                                    gATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatca                                                                              >  2:1334833/1‑149 (MQ=255)
                                                                     aTCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcat                                                                             >  4:509000/1‑149 (MQ=255)
                                                                         aCCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACatcatcatc                                                                         >  4:414657/1‑149 (MQ=255)
                                                                            gaagaaGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTc                                                                                        >  3:8187/1‑131 (MQ=255)
                                                                            gaagaaGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTc                                                                                        <  4:8187/131‑1 (MQ=255)
                                                                            gaagaaGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGcc                                                                      >  1:214253/1‑149 (MQ=255)
                                                                                  gTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCtt                                                                                                                          >  3:1130824/1‑91 (MQ=255)
                                                                                   tAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTa                                                               <  1:952236/149‑1 (MQ=255)
                                                                                    aaGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCTGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTAc                                                              <  4:133999/149‑1 (MQ=255)
                                                                                    aaGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTAc                                                              <  1:508798/149‑1 (MQ=255)
                                                                                    aaGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTAc                                                              >  1:1246076/1‑149 (MQ=255)
                                                                                       cTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGc                                                           <  4:68271/149‑1 (MQ=255)
                                                                                         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCa                                                         <  3:927234/149‑1 (MQ=255)
                                                                                            tGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACtt                                                      >  1:476905/1‑149 (MQ=255)
                                                                                              cTCAACCGTTGGCCGGATAACGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACTATCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAg                                                    >  4:646937/1‑149 (MQ=255)
                                                                                               tCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAgc                                                   <  4:353365/149‑1 (MQ=255)
                                                                                               tCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAgc                                                   >  4:1206977/1‑149 (MQ=255)
                                                                                               tCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAgc                                                   >  1:181445/1‑149 (MQ=255)
                                                                                                  aCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCt                                                >  1:1021890/1‑149 (MQ=255)
                                                                                                    cGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTtc                                              <  2:1242826/149‑1 (MQ=255)
                                                                                                    cGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTtc                                              <  3:1309545/149‑1 (MQ=255)
                                                                                                        tgCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAg                                                    >  1:1503503/2‑139 (MQ=255)
                                                                                                        tgCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAg                                                    <  2:1503503/138‑1 (MQ=255)
                                                                                                          ccGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGaa                                        >  2:98789/1‑149 (MQ=255)
                                                                                                           cGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGaaa                                       <  3:1407564/149‑1 (MQ=255)
                                                                                                            ggatgcggCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAaat                                      >  1:846064/7‑149 (MQ=255)
                                                                                                                aaGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAAt                                                                                     <  3:394988/98‑1 (MQ=255)
                                                                                                                aaGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATg                                  <  1:1353055/149‑1 (MQ=255)
                                                                                                                  ggCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGa                                                                                                                                             <  3:78905/40‑1 (MQ=255)
                                                                                                                  ggCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGa                                                                                                                                             >  4:78905/1‑40 (MQ=255)
                                                                                                                    cGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTc                              <  4:1150478/149‑1 (MQ=255)
                                                                                                                     gTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCg                             <  1:1334833/149‑1 (MQ=255)
                                                                                                                        aaCGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAttt                                                                                         >  4:467679/1‑86 (MQ=255)
                                                                                                                        aaCGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAttt                                                                                         <  3:467679/86‑1 (MQ=255)
                                                                                                                          cgccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATg                        <  1:753432/149‑1 (MQ=255)
                                                                                                                          cgccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATg                        <  2:1393002/149‑1 (MQ=255)
                                                                                                                           gccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg                       >  1:837076/1‑149 (MQ=255)
                                                                                                                           gccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg                       <  1:1336693/149‑1 (MQ=255)
                                                                                                                           gccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg                       >  3:224824/1‑149 (MQ=255)
                                                                                                                                aTCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATaa                  <  1:1361136/149‑1 (MQ=255)
                                                                                                                                     gCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACGCaa             <  2:837076/149‑1 (MQ=255)
                                                                                                                                         tGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACGCAAGTGa         <  2:214253/149‑1 (MQ=255)
                                                                                                                                            ggAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGTCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACGCAAGTGATcc      <  3:414657/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
AGCCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACGCAAGTGATCCAGGG  >  NC_000913/2592877‑2593169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.