New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4534139204 (1.230)7 (0.050) 7/242 NT 3.4% intergenic (‑86/+291) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
?NC_000913 = 4534160 208 (1.360)intergenic (‑107/+270) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
Rejected: Frequency below/above cutoff threshold.

Only 100 of 266 total aligned reads displayed.

GCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACT  >  NC_000913/4533992‑4534287
                                                                                                                                                   |                                                                                                                                                    
    tACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGc                                                                                                                                                 <  1:1381124/149‑1 (MQ=255)
    tACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGc                                                                                                                                                 >  3:308450/1‑149 (MQ=255)
     aCGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGcc                                                                                                                                                <  2:331233/149‑1 (MQ=255)
       ggcTACCTTTAGCGAGAACGTGTAAGGTATGTGGTGCCTGACGGAATAAATTCATACTGAAGACCCTACTTAATCCTCATGGGCAGACCGTGCAAACACACCGGGGTGGCCACATCCAATTTCGGCGCATTGATAATCAGTCCGGTCTg                                                                                                                                              <  2:746305/147‑1 (MQ=255)
          tACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGaaa                                                                                                                                           >  2:1030543/1‑149 (MQ=255)
           aCCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGaaaa                                                                                                                                          <  1:1003663/149‑1 (MQ=255)
              tttAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGt                                                                                                                                       >  4:1394454/1‑149 (MQ=255)
                tAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCg                                                                                                                                     <  2:777759/149‑1 (MQ=255)
                 aGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgg                                                                                                                                    <  1:29417/149‑1 (MQ=255)
                  gCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCggg                                                                                                                                   <  3:532715/149‑1 (MQ=255)
                    gagaACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGa                                                                                                                                 >  2:544510/1‑149 (MQ=255)
                         cGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactga                                                                                                                            >  2:560306‑M2/1‑144 (MQ=255)
                             tAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTtccccgaccttttcaggccggactgattat                                                                                                                        <  3:499899‑M1/149‑31 (MQ=255)
                             tAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattat                                                                                                                        <  3:1408138‑M2/149‑10 (MQ=255)
                              aaGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatc                                                                                                                       <  2:6654‑M2/149‑11 (MQ=255)
                               tggTATGTTGTTCCTGACGGTATACATCCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCg                                                                                                                      >  2:1395006/2‑149 (MQ=255)
                                ggTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTtccccgaccttttcaggccggactgattatcaa                                                                                                                     <  1:318304‑M1/149‑34 (MQ=255)
                                 gTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGga                                                                                                                    >  3:850376/1‑149 (MQ=255)
                                      ttgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAtt                                                                                                               <  1:49672/149‑1 (MQ=255)
                                      ttgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAtt                                                                                                               <  4:931735/149‑1 (MQ=255)
                                       tgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTa                                                                                                              <  3:1142757/149‑1 (MQ=255)
                                         ttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACa                                                                                                            <  3:1037612/149‑1 (MQ=255)
                                             tGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATtct                                                                                                        >  2:489505/1‑149 (MQ=255)
                                                   gATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCa                                                                                                  >  2:345152/1‑149 (MQ=255)
                                                    aTAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCAt                                                                                                 >  3:1261538/1‑149 (MQ=255)
                                                    aTAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCAt                                                                                                 <  1:464654/149‑1 (MQ=255)
                                                        aTTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaaa                                                                                             <  3:650767/149‑1 (MQ=255)
                                                         ttCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAg                                                                                            >  2:1296496/1‑149 (MQ=255)
                                                             tACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTc                                                                                        >  4:626628/1‑149 (MQ=255)
                                                                  aagaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgtt                                                                                   >  3:5733/1‑149 (MQ=255)
                                                                  aagaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAAGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCgg                                                                                      >  2:246384/1‑146 (MQ=255)
                                                                  aagaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAAGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCgg                                                                                      <  1:246384/146‑1 (MQ=255)
                                                                    gaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttga                                                                                 <  1:1148960/149‑1 (MQ=255)
                                                                    gaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttga                                                                                 <  4:67795/149‑1 (MQ=255)
                                                                    gaaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttga                                                                                 <  2:618321/149‑1 (MQ=255)
                                                                      aCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgagt                                                                               >  3:741804/1‑149 (MQ=255)
                                                                        cTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgagttg                                                                             >  3:21500/1‑149 (MQ=255)
                                                                          aTTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAATACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaa                                                                           >  3:964965/1‑149 (MQ=255)
                                                                           tttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaaa                                                                          >  1:63597/1‑149 (MQ=255)
                                                                           tttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaaa                                                                          >  3:826838/1‑149 (MQ=255)
                                                                              aaTCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGt                                                                       >  2:432979/1‑149 (MQ=255)
                                                                                tcatcaTGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGCTTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTAt                                                                     <  1:829741/149‑1 (MQ=255)
                                                                                 catcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTAtt                                                                    >  4:848977/1‑149 (MQ=255)
                                                                                   tcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTa                                                                  <  3:1394454/149‑1 (MQ=255)
                                                                                   tcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTa                                                                  <  1:414854/149‑1 (MQ=255)
                                                                                   tcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTa                                                                  >  4:1221851/1‑149 (MQ=255)
                                                                                   tcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGAATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgat                                                                                                                   <  2:1112003/100‑1 (MQ=255)
                                                                                    catGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTAc                                                                 >  4:263928/1‑149 (MQ=255)
                                                                                    catGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTATCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTAc                                                                 <  4:855598/149‑1 (MQ=255)
                                                                                     atGTGCAAAACGTGAAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACg                                                                >  3:113164/1‑149 (MQ=255)
                                                                                       gtgCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGa                                                              <  3:1311713/149‑1 (MQ=255)
                                                                                           aacaCGTGCAAACACACCGGGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGa                                                          >  2:200415/4‑149 (MQ=255)
                                                                                           aaaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGa                                                          >  1:1337618/1‑149 (MQ=255)
                                                                                            aaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCa                                                                                                  <  3:68955/108‑1 (MQ=255)
                                                                                            aaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGt                                                                       <  4:716157/135‑1 (MQ=255)
                                                                                              aCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAata                                                       <  1:1091176/149‑1 (MQ=255)
                                                                                                gTGCAAACACACCGCGGTGTCCGCATTCGATTTCGTCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATAtt                                                     >  4:561051/1‑149 (MQ=255)
                                                                                                  gCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTaa                                                   <  4:521098/149‑1 (MQ=255)
                                                                                                  gCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCGCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTaa                                                   <  1:6654/149‑1 (MQ=255)
                                                                                                   cAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAac                                                  <  1:345152/149‑1 (MQ=255)
                                                                                                    aaaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAaca                                                 >  4:794672/1‑149 (MQ=255)
                                                                                                    aaaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAaca                                                 >  1:60856/1‑149 (MQ=255)
                                                                                                     aaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAacac                                                >  4:3492/1‑149 (MQ=255)
                                                                                                       cacacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGt                                              <  3:415898/149‑1 (MQ=255)
                                                                                                        acacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTa                                             <  2:822951/149‑1 (MQ=255)
                                                                                                          acCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGt                                           >  3:284954/1‑149 (MQ=255)
                                                                                                          acCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGt                                           >  2:962860/1‑149 (MQ=255)
                                                                                                            cgcgGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAac                                                  <  2:1339521/140‑1 (MQ=255)
                                                                                                               ggTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATag                                      <  4:308450/149‑1 (MQ=255)
                                                                                                                   tCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATaggagg                                  <  3:794672/149‑1 (MQ=255)
                                                                                                                    ccGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAggg                                 <  1:1206949/149‑1 (MQ=255)
                                                                                                                    ccGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAggg                                 <  2:93851/149‑1 (MQ=255)
                                                                                                                     cGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGCGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGa                                >  1:953281/1‑149 (MQ=255)
                                                                                                                     cGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGa                                >  3:913829/1‑149 (MQ=255)
                                                                                                                      gCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGat                               >  4:11756/1‑149 (MQ=255)
                                                                                                                           tgATTTCGGCGCAGTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCGTCAAAGCCTCGGGTCGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGtt                          >  4:1283893/2‑149 (MQ=255)
                                                                                                                            gATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGttt                         <  4:1129065/149‑1 (MQ=255)
                                                                                                                             aTTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTc                        >  2:1156637/1‑149 (MQ=255)
                                                                                                                              tttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCa                       <  1:818682/149‑1 (MQ=255)
                                                                                                                                  ggCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGAATCTCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGATTCAGTAg                   >  4:911489/1‑149 (MQ=255)
                                                                                                                                     gcATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGaaa                >  2:1213322/1‑149 (MQ=255)
                                                                                                                                     gcATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACAGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGaaa                >  2:1499662/1‑149 (MQ=255)
                                                                                                                                       aTTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaac                     <  2:400145‑M2/142‑109 (MQ=255)
                                                                                                                                       aTTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaac                     >  1:400145‑M2/1‑34 (MQ=255)
                                                                                                                                       aTTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGaaaaa              >  1:146794/1‑149 (MQ=255)
                                                                                                                                          gATAATCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacatacctt           >  4:896263‑M1/1‑10 (MQ=255)
                                                                                                                                          gATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAgtg           >  1:526003/1‑149 (MQ=255)
                                                                                                                                           aTAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgag                                                                                <  1:994936/79‑1 (MQ=255)
                                                                                                                                             aaTCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttaca        <  2:119261‑M1/149‑143 (MQ=255)
                                                                                                                                             aaTCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttaca        <  3:38351‑M1/149‑143 (MQ=255)
                                                                                                                                             aaTCAGTCCGGCCTGAAAAGGTCGG‑‑ctgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacgt       <  4:1328375‑M2/149‑124 (MQ=255)
                                                                                                                                              aTCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacac       >  3:468308‑M1/1‑6 (MQ=255)
                                                                                                                                              aTCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGAGTGAt       >  4:468246/1‑149 (MQ=255)
                                                                                                                                               tCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacg      >  4:1483481‑M1/1‑5 (MQ=255)
                                                                                                                                               tCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTa                                             <  1:739605/110‑1 (MQ=255)
                                                                                                                                                cAGTCCGGCCTGAAAAGGTCGG‑‑ctgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacgttct    <  4:904510‑M2/149‑127 (MQ=255)
                                                                                                                                                 aGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacgtt    >  3:1752‑M1/1‑3 (MQ=255)
                                                                                                                                                 aGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgttt                                                                                 <  3:300092‑M1/72‑70 (MQ=255)
                                                                                                                                                 aGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgttt                                                                                 >  4:300092‑M1/1‑3 (MQ=255)
                                                                                                                                                   tCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACt  <  4:20958/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACT  >  NC_000913/4533992‑4534287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.