New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3621402 =	NA (NA)	9 (0.060)	8/250	NT	100%	coding (2211/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3621407 =	0 (0.000)					coding (2216/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGC  >  NC_000913/3621259‑3621555                                                                                                                                                     |                                                                                                                                                     cggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccc                                                                                                                                                      >  4:1128150‑M2/149‑149 (MQ=255)  ggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgactctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCg                                                                                                                                                     >  4:1044269‑M2/148‑149 (MQ=255)  ggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCg                                                                                                                                                     >  4:771738‑M2/148‑149 (MQ=255)  ggtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCg                                                                                                                                                     >  3:1179770‑M2/148‑149 (MQ=255)   gtatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                                    <  1:148050‑M2/3‑1 (MQ=255)   ctatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                                    <  1:1334979‑M2/3‑1 (MQ=255)    tatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGt                                                                                                                                                   <  1:758303‑M2/4‑1 (MQ=255)    tatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGt                                                                                                                                                   <  1:904705‑M2/4‑1 (MQ=255)    tatacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGt                                                                                                                                                   <  3:824991‑M2/4‑1 (MQ=255)     atacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTg                                                                                                                                                  <  4:284691‑M2/5‑1 (MQ=255)      tacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                                                 >  4:84083‑M2/144‑149 (MQ=255)      tacagcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                                                 >  4:1024570‑M2/144‑149 (MQ=255)         agcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                                    >  4:8387‑M2/141‑143 (MQ=255)         agcggttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                                    <  3:8387‑M2/3‑1 (MQ=255)              ttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                                    <  1:85695‑M2/3‑1 (MQ=255)              ttcgccagcccctgcgcgttgtacgcatgtctggtctcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCgg                                                                                                                                                    >  2:85695‑M2/136‑138 (MQ=255)                          tgcgcgttgtacgcatgtctggtctcatgctgtcagagcagagcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgggtggCGGTGCATTACAGGTATGATGAGaaa                                                                                                                             <  4:888675‑M2/26‑1 (MQ=255)                                                  tcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                                                 >  1:735007‑M2/100‑105 (MQ=255)                                                  tcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                                                 <  1:15478‑M2/6‑1 (MQ=255)                                                  tcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                                                 <  2:735007‑M2/6‑1 (MQ=255)                                                  tcatgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGTGc                                                                                                                                                 >  2:15478‑M2/100‑105 (MQ=255)                                                    atgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgggtggCGGTGCATTACAGGTAtgatga                                                                                                                                 <  3:1239696‑M2/22‑1 (MQ=255)                                                    atgctgccagagcagtgcttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgggtggCGGTGCATTACAGGTAtgatga                                                                                                                                 >  4:1239696‑M2/98‑119 (MQ=255)                                                                      ttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGt                                                                                                                                                   >  1:316801‑M2/80‑83 (MQ=255)                                                                      ttccgtctgcgggtgatgcaccgtctgacgctcaccggtcagccggcctttctcatcatacctgtaatgcaccgccaccCGGt                                                                                                                                                   <  2:316801‑M2/4‑1 (MQ=255)                                                                                                                                    tgtaatgcaccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAAcc                   >  3:1462801‑M2/18‑149 (MQ=255)                                                                                                                                    tgtaatgcaccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAAcc                   >  4:240739‑M2/18‑149 (MQ=255)                                                                                                                                      taatgcaccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGc                 >  1:794308‑M2/16‑149 (MQ=255)                                                                                                                                        atgcaccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATgaga                                                       >  1:1499460‑M2/14‑109 (MQ=255)                                                                                                                                        atgcaccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATgaga                                                       <  2:1499460‑M2/96‑1 (MQ=255)                                                                                                                                         tgcaccgccaccCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGt              >  2:773463‑M2/13‑149 (MQ=255)                                                                                                                                                     CGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGc  <  3:1410287‑M2/149‑1 (MQ=255)                                                                                                                                                     CGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGc  <  4:724163‑M2/149‑1 (MQ=255)                                                                                                                                                     CGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGc  >  1:732241‑M2/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGC  >  NC_000913/3621259‑3621555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.