New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1070920 =	56 (0.720)	4 (0.050)	4/254	NT	6.7%	coding (36/591 nt)	rutE	putative malonic semialdehyde reductase
	?	NC_000913	1070935 =	58 (0.780)					coding (21/591 nt)	rutE	putative malonic semialdehyde reductase

TGCCCTATGGCGGACACGCCTGCAACGTGACCGATCCCGAAACGTTTAATGCTCTGTTACTCAACGGGCTTGCCAGCCTGTTACATCACCGTGAAGCCGCCCTGTAAGGAATTGCTATGAACGAAGCCGTTAGCCCAGGTGCGCTTAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1071071‑1070920 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccTGGGCTAACGGCTTCGTTCATAGCAATTCCTTACAGGGCGGCTTCACGGTGATGTAACAGGCTGGCAAGCCCGTTGA  >  NC_000913/1070935‑1071011                                                                                                                                                                                                                                       TGCCCTATGGCGGACACGCCTGCAACGAGACCGATCCCGAAACGTTTAATACTCTGTTACTCAACGGGCTTGCCGGCCTGTTACATCACCGTGAAGCCGCCCTGTAAGGAATTGCTATGAACGAAGCCGTTAGCCCAGGTGCGCTTAGC                                                                                  >  3:418528/1‑149                ACGCCTGCAACGTGACCGATCCCGAAACGTTTAATGCTCTGTTACTCAACGGGCTTGCCAGCCTGTTACATCACCGTGAAGCCGCCCTGTAAGGAATTGCTATGAACGAAGCCGTTAGCCCAGGTGCGCTTAGCA                                                                                 >  3:486773/1‑135                ACGCCTGCAACGTGACCGATCCCGAAACGTTTAATGCTCTGTTACTCAACGGGCTTGCCAGCCTGTTACATCACCGTGAAGCCGCCCTGTAAGGAATTGCTATGAACGAAGCCGTTAGCCCAGGTGCGCTTAGCA                                                                                 <  4:486773/135‑1                                               TAATGCTCTGTTACTCAACGGGCTTGCCAGCCTGTTACATCACCGTGAAGCCGCCCTGTAAGGAATTGCTATGAACGAAGCCGTTAGCCCAGGTGCTAAGCGCACCTGGGCTAACGGCTTCGT                                                              <  3:514876/123‑1                                               TAATGCTCTGTTACTCAACGGGCTTGCCAGCCTGTTACATCACCGTGAAGCCGCCCTGTAAGGAATTGCTATGAACGAAGCCGTTAGCCCAGGTGCTAAGCGCACCTGGGCTAACGGCTTCGT                                                              >  4:514876/1‑123                                                                                                                                       CCAGGTGCGCTTAGCACCTGGGCTAACGGCTTCGTTCATAGCAATTCCTTACAGGGCGGCTTCACGGTGATGTAACAGGCTGGCAAGCCCGTTGA  <  1:600915/95‑1                                                                                                                                       CCAGGTGCGCTTAGCACCTGGGCTAACGGCTTCGTTCATAGCAATTCCTTACAGGGCGGCTTCACGGTGATGTAACAGGCTGGCAAGCCCGTTGA  >  2:600915/1‑95                                                                                                                                                                                                                                       TGCCCTATGGCGGACACGCCTGCAACGTGACCGATCCCGAAACGTTTAATGCTCTGTTACTCAACGGGCTTGCCAGCCTGTTACATCACCGTGAAGCCGCCCTGTAAGGAATTGCTATGAACGAAGCCGTTAGCCCAGGTGCGCTTAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1071071‑1070920 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccTGGGCTAACGGCTTCGTTCATAGCAATTCCTTACAGGGCGGCTTCACGGTGATGTAACAGGCTGGCAAGCCCGTTGA  >  NC_000913/1070935‑1071011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.